RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W EPT1P22140 391 aa6.72□□□□□ -1.33
NUP49YGL172W PHO3P24031 467 aa6.72□□□□□ -1.33
NUP49YGL172W MF(ALPHA)2P32435 120 aa6.72□□□□□ -1.33
NUP49YGL172W DSN1P40568 576 aa6.72□□□□□ -1.33
NUP49YGL172W CTK3P46963 296 aaPredicted RBP6.72□□□□□ -1.33
NUP49YGL172W MTO1P53070 669 aa6.72□□□□□ -1.33
NUP49YGL172W LSC1P53598 329 aaKnown RBP6.72□□□□□ -1.33
NUP49YGL172W ALG12P53730 551 aa6.72□□□□□ -1.33
NUP49YGL172W TAF11Q04226 346 aa6.72□□□□□ -1.33
NUP49YGL172W FAR8Q05040 523 aa6.72□□□□□ -1.33
NUP49YGL172W YLR177WQ06251 628 aa6.72□□□□□ -1.33
NUP49YGL172W VTA1Q06263 330 aa6.72□□□□□ -1.33
NUP49YGL172W CRN1Q06440 651 aa6.72□□□□□ -1.33
NUP49YGL172W HBT1Q07653 1046 aaKnown RBP6.72□□□□□ -1.33
NUP49YGL172W SMF3Q12078 473 aaPredicted RBP6.72□□□□□ -1.33
NUP49YGL172W CHS5Q12114 671 aaKnown RBP6.72□□□□□ -1.33
NUP49YGL172W NCA2Q12374 616 aa6.72□□□□□ -1.33
NUP49YGL172W NAG1Q8TGN9 163 aa6.72□□□□□ -1.33
NUP49YGL172W BEM2P39960 2167 aaKnown RBP6.72□□□□□ -1.33
NUP49YGL172W CPA1P07258 411 aaKnown RBP6.71□□□□□ -1.34
NUP49YGL172W YKR104WP0CE69 306 aa6.71□□□□□ -1.34
NUP49YGL172W ABF1P14164 731 aa6.71□□□□□ -1.34
NUP49YGL172W POL30P15873 258 aaKnown RBP6.71□□□□□ -1.34
NUP49YGL172W AMD2P22580 549 aa6.71□□□□□ -1.34
NUP49YGL172W SRX1P36077 127 aa6.71□□□□□ -1.34
NUP49YGL172W SET3P36124 751 aa6.71□□□□□ -1.34
NUP49YGL172W DBP8P38719 431 aa6.71□□□□□ -1.34
NUP49YGL172W LIN1P38852 340 aaPredicted RBP6.71□□□□□ -1.34
NUP49YGL172W YHR182WP38870 785 aa6.71□□□□□ -1.34
NUP49YGL172W BAT1P38891 393 aaKnown RBP6.71□□□□□ -1.34
NUP49YGL172W CYC2P38909 366 aa6.71□□□□□ -1.34
NUP49YGL172W HAT2P39984 401 aa6.71□□□□□ -1.34
NUP49YGL172W MGS1P40151 587 aa6.71□□□□□ -1.34
NUP49YGL172W SEC28P40509 296 aaKnown RBP6.71□□□□□ -1.34
NUP49YGL172W YJL107CP42947 387 aa6.71□□□□□ -1.34
NUP49YGL172W LIA1P47120 325 aaKnown RBP6.71□□□□□ -1.34
NUP49YGL172W UBX4P54730 416 aa6.71□□□□□ -1.34
NUP49YGL172W ADE12P80210 433 aaKnown RBP6.71□□□□□ -1.34
NUP49YGL172W RNY1Q02933 434 aaKnown RBP6.71□□□□□ -1.34
NUP49YGL172W ARX1Q03862 593 aaKnown RBP6.71□□□□□ -1.34
NUP49YGL172W CSN9Q03981 162 aa6.71□□□□□ -1.34
NUP49YGL172W EMI1Q04406 187 aa6.71□□□□□ -1.34
NUP49YGL172W TDA5Q06417 326 aaKnown RBP6.71□□□□□ -1.34
NUP49YGL172W MRH1Q12117 320 aaPredicted RBP6.71□□□□□ -1.34
NUP49YGL172W UPC2Q12151 913 aa6.71□□□□□ -1.34
NUP49YGL172W SEM1O94742 89 aa6.7□□□□□ -1.34
NUP49YGL172W SEC53P07283 254 aaKnown RBP6.7□□□□□ -1.34
NUP49YGL172W SBP1P10080 294 aaKnown RBP6.7□□□□□ -1.34
NUP49YGL172W GCY1P14065 312 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
NUP49YGL172W TRX2P22803 104 aaKnown RBP6.7□□□□□ -1.34
NUP49YGL172W AAD3P25612 363 aa6.7□□□□□ -1.34
NUP49YGL172W YCR051WP25631 222 aa6.7□□□□□ -1.34
NUP49YGL172W RFA2P26754 273 aaKnown RBP6.7□□□□□ -1.34
NUP49YGL172W PHA2P32452 334 aa6.7□□□□□ -1.34
NUP49YGL172W ASK1P35734 292 aa6.7□□□□□ -1.34
NUP49YGL172W YKL151CP36059 337 aa6.7□□□□□ -1.34
NUP49YGL172W IML3P38265 245 aa6.7□□□□□ -1.34
NUP49YGL172W PHO89P38361 574 aa6.7□□□□□ -1.34
NUP49YGL172W EFM1P38732 585 aa6.7□□□□□ -1.34
NUP49YGL172W OAF1P39720 1047 aaPredicted RBP6.7□□□□□ -1.34
NUP49YGL172W TIF34P40217 347 aaKnown RBP6.7□□□□□ -1.34
NUP49YGL172W YJL070CP40361 888 aa6.7□□□□□ -1.34
NUP49YGL172W BOL2P53082 120 aa6.7□□□□□ -1.34
NUP49YGL172W SPP2Q02521 185 aa6.7□□□□□ -1.34
NUP49YGL172W HPT1Q04178 221 aaKnown RBP6.7□□□□□ -1.34
NUP49YGL172W ARG7Q04728 441 aa6.7□□□□□ -1.34
NUP49YGL172W TRM8Q12009 286 aa6.7□□□□□ -1.34
NUP49YGL172W UBX3Q12229 455 aa6.7□□□□□ -1.34
NUP49YGL172W KIP2P28743 706 aa6.69□□□□□ -1.34
NUP49YGL172W TOR2P32600 2474 aaKnown RBP6.69□□□□□ -1.34
NUP49YGL172W GMH1P36125 273 aa6.69□□□□□ -1.34
NUP49YGL172W RRP3P38712 501 aaKnown RBP6.69□□□□□ -1.34
NUP49YGL172W PCF11P39081 626 aaPredicted RBP6.69□□□□□ -1.34
NUP49YGL172W PFK26P40433 827 aaKnown RBP6.69□□□□□ -1.34
NUP49YGL172W YFR018CP43599 363 aa6.69□□□□□ -1.34
NUP49YGL172W PET130P47065 347 aa6.69□□□□□ -1.34
NUP49YGL172W MNN10P50108 393 aaKnown RBP6.69□□□□□ -1.34
NUP49YGL172W YGL108CP53139 140 aa6.69□□□□□ -1.34
NUP49YGL172W NPL3Q01560 414 aaKnown RBP RIP-Chip data6.69□□□□□ -1.34not detected
NUP49YGL172W YPL113CQ02961 396 aa6.69□□□□□ -1.34
NUP49YGL172W TAF12Q03761 539 aa6.69□□□□□ -1.34
NUP49YGL172W RCO1Q04779 684 aa6.69□□□□□ -1.34
NUP49YGL172W MFB1Q04922 465 aa6.69□□□□□ -1.34
NUP49YGL172W BLS1Q06071 122 aa6.69□□□□□ -1.34
NUP49YGL172W HDA3Q06623 655 aa6.69□□□□□ -1.34
NUP49YGL172W RSC3Q06639 885 aa6.69□□□□□ -1.34
NUP49YGL172W ICT1Q12385 394 aa6.69□□□□□ -1.34
NUP49YGL172W FMP27Q06179 2628 aa6.68□□□□□ -1.34
NUP49YGL172W PTM1P32857 523 aa6.68□□□□□ -1.34
NUP49YGL172W TIP20P33891 701 aa6.68□□□□□ -1.34
NUP49YGL172W RRN3P36070 627 aa6.68□□□□□ -1.34
NUP49YGL172W YBR032WP38223 100 aa6.68□□□□□ -1.34
NUP49YGL172W MUP3P38734 546 aa6.68□□□□□ -1.34
NUP49YGL172W PFS1P38872 237 aa6.68□□□□□ -1.34
NUP49YGL172W LSM5P40089 93 aaKnown RBP6.68□□□□□ -1.34
NUP49YGL172W FAR3P46671 204 aa6.68□□□□□ -1.34
NUP49YGL172W PAN2P53010 1115 aaPredicted RBP6.68□□□□□ -1.34
NUP49YGL172W CLD1P53264 445 aa6.68□□□□□ -1.34
NUP49YGL172W CCE1Q03702 353 aa6.68□□□□□ -1.34
NUP49YGL172W SSL1Q04673 461 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms