RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W COQ11Q05892 277 aa6.95□□□□□ -1.3
LCP5YER127W NUP192P47054 1683 aa6.94□□□□□ -1.3
LCP5YER127W SEM1O94742 89 aa6.94□□□□□ -1.3
LCP5YER127W HXK2P04807 486 aaKnown RBP6.94□□□□□ -1.3
LCP5YER127W YCK1P23291 538 aa6.94□□□□□ -1.3
LCP5YER127W MBR1P23493 339 aa6.94□□□□□ -1.3
LCP5YER127W IMP2'P32351 346 aa6.94□□□□□ -1.3
LCP5YER127W CDC1P40986 491 aa6.94□□□□□ -1.3
LCP5YER127W SNO3P43544 222 aa6.94□□□□□ -1.3
LCP5YER127W PFA5Q03289 374 aa6.94□□□□□ -1.3
LCP5YER127W MED1Q12321 566 aa6.94□□□□□ -1.3
LCP5YER127W IST1P53843 298 aaPredicted RBP6.93□□□□□ -1.3
LCP5YER127W IDP3P53982 420 aaKnown RBP6.93□□□□□ -1.3
LCP5YER127W YKU80Q04437 629 aa6.93□□□□□ -1.3
LCP5YER127W PSR1Q07800 427 aa6.93□□□□□ -1.3
LCP5YER127W EDE1P34216 1381 aa6.93□□□□□ -1.3
LCP5YER127W TY3B-IQ7LHG5 1498 aaKnown RBP6.92□□□□□ -1.3
LCP5YER127W YER145C-AA0A023PYF4 145 aa6.92□□□□□ -1.3
LCP5YER127W YMR085WP0CF18 432 aa6.92□□□□□ -1.3
LCP5YER127W ARN1P38731 627 aa6.92□□□□□ -1.3
LCP5YER127W YFR020WP43600 232 aa6.92□□□□□ -1.3
LCP5YER127W CTK2P46962 323 aa6.92□□□□□ -1.3
LCP5YER127W RSC9Q03124 581 aa6.92□□□□□ -1.3
LCP5YER127W RIM13Q03792 727 aa6.92□□□□□ -1.3
LCP5YER127W SEG1Q04279 960 aa6.92□□□□□ -1.3
LCP5YER127W MCH4Q08268 501 aa6.92□□□□□ -1.3
LCP5YER127W PFA4Q12006 378 aa6.92□□□□□ -1.3
LCP5YER127W SEC53P07283 254 aaKnown RBP6.91□□□□□ -1.3
LCP5YER127W OCT1P35999 772 aa6.91□□□□□ -1.3
LCP5YER127W YJL107CP42947 387 aa6.91□□□□□ -1.3
LCP5YER127W ERG13P54839 491 aaKnown RBP6.91□□□□□ -1.3
LCP5YER127W HSC82P15108 705 aaKnown RBP6.9□□□□□ -1.3
LCP5YER127W COQ3P27680 312 aa6.9□□□□□ -1.3
LCP5YER127W AUR1P36107 401 aaPredicted RBP6.9□□□□□ -1.3
LCP5YER127W NDE1P40215 560 aa6.9□□□□□ -1.3
LCP5YER127W INA17Q02888 182 aa6.9□□□□□ -1.3
LCP5YER127W YLR455WQ06188 304 aa6.9□□□□□ -1.3
LCP5YER127W INH1P01097 85 aa6.89□□□□□ -1.31
LCP5YER127W CHO1P08456 276 aa6.89□□□□□ -1.31
LCP5YER127W VMA16P23968 213 aa6.89□□□□□ -1.31
LCP5YER127W POL4P25615 582 aa6.89□□□□□ -1.31
LCP5YER127W SAC6P32599 642 aaKnown RBP6.89□□□□□ -1.31
LCP5YER127W NOP4P37838 685 aaKnown RBP6.89□□□□□ -1.31
LCP5YER127W XBP1P40489 647 aa6.89□□□□□ -1.31
LCP5YER127W DPB11P47027 764 aaPredicted RBP6.89□□□□□ -1.31
LCP5YER127W RPS7BP48164 190 aaKnown RBP6.89□□□□□ -1.31
LCP5YER127W LYS4P49367 693 aaPredicted RBP6.89□□□□□ -1.31
LCP5YER127W NNF2P53253 936 aa6.89□□□□□ -1.31
LCP5YER127W ARP9Q05123 467 aa6.89□□□□□ -1.31
LCP5YER127W GET3Q12154 354 aaKnown RBP6.89□□□□□ -1.31
LCP5YER127W RAP1P11938 827 aa6.88□□□□□ -1.31
LCP5YER127W TKL1P23254 680 aaKnown RBP6.88□□□□□ -1.31
LCP5YER127W AGP2P38090 596 aa6.88□□□□□ -1.31
LCP5YER127W RPN11P43588 306 aaKnown RBP6.88□□□□□ -1.31
LCP5YER127W TSR2Q06672 205 aaKnown RBP6.88□□□□□ -1.31
LCP5YER127W GPA1P08539 472 aa6.87□□□□□ -1.31
LCP5YER127W PDB1P32473 366 aaKnown RBP6.87□□□□□ -1.31
LCP5YER127W YNG2P38806 282 aaKnown RBP6.87□□□□□ -1.31
LCP5YER127W LCL3P53153 274 aa6.87□□□□□ -1.31
LCP5YER127W RRI1Q12468 440 aa6.87□□□□□ -1.31
LCP5YER127W NOP58Q12499 511 aaKnown RBP6.87□□□□□ -1.31
LCP5YER127W PEP3P27801 918 aa6.86□□□□□ -1.31
LCP5YER127W PXL1P36166 706 aa6.86□□□□□ -1.31
LCP5YER127W AFG3P39925 761 aa6.86□□□□□ -1.31
LCP5YER127W PKP1P40530 394 aa6.86□□□□□ -1.31
LCP5YER127W UBP8P50102 471 aa6.86□□□□□ -1.31
LCP5YER127W DSD1P53095 428 aa6.86□□□□□ -1.31
LCP5YER127W RBG2P53295 368 aaKnown RBP6.86□□□□□ -1.31
LCP5YER127W MDM1Q01846 1127 aa6.86□□□□□ -1.31
LCP5YER127W NGL3Q03210 505 aa6.86□□□□□ -1.31
LCP5YER127W ECM22Q05958 814 aaPredicted RBP6.86□□□□□ -1.31
LCP5YER127W PIG1Q06216 648 aa6.86□□□□□ -1.31
LCP5YER127W FRE3Q08905 711 aa6.86□□□□□ -1.31
LCP5YER127W RRP5Q05022 1729 aaKnown RBP6.86□□□□□ -1.31
LCP5YER127W YRF1-2P40105 1681 aa6.86□□□□□ -1.31
LCP5YER127W GAL4P04386 881 aa6.85□□□□□ -1.31
LCP5YER127W MET8P15807 274 aa6.85□□□□□ -1.31
LCP5YER127W KAR3P17119 729 aa6.85□□□□□ -1.31
LCP5YER127W SPE2P21182 396 aa6.85□□□□□ -1.31
LCP5YER127W PWP1P21304 576 aaKnown RBP6.85□□□□□ -1.31
LCP5YER127W SGF29P25554 259 aa6.85□□□□□ -1.31
LCP5YER127W CMK1P27466 446 aaKnown RBP6.85□□□□□ -1.31
LCP5YER127W TPA1P40032 644 aaKnown RBP6.85□□□□□ -1.31
LCP5YER127W ULP2P40537 1034 aaPredicted RBP6.85□□□□□ -1.31
LCP5YER127W COP1P53622 1201 aaKnown RBP6.85□□□□□ -1.31
LCP5YER127W YML037CQ03703 340 aa6.85□□□□□ -1.31
LCP5YER127W YOL159CQ08300 171 aa6.85□□□□□ -1.31
LCP5YER127W ATG9Q12142 997 aa6.85□□□□□ -1.31
LCP5YER127W INP53Q12271 1107 aa6.85□□□□□ -1.31
LCP5YER127W CRC1Q12289 327 aa6.85□□□□□ -1.31
LCP5YER127W ROM2P51862 1356 aaKnown RBP6.84□□□□□ -1.31
LCP5YER127W YAP1P19880 650 aaKnown RBP6.84□□□□□ -1.31
LCP5YER127W SAC1P32368 623 aaKnown RBP6.84□□□□□ -1.31
LCP5YER127W DIA4P38705 446 aaPredicted RBP6.84□□□□□ -1.31
LCP5YER127W FLO5P38894 1075 aa6.84□□□□□ -1.31
LCP5YER127W FLC2P39719 783 aa6.84□□□□□ -1.31
LCP5YER127W SMC3P47037 1230 aa6.84□□□□□ -1.31
LCP5YER127W DIA3P52290 468 aa6.84□□□□□ -1.31
LCP5YER127W YNL144CP53907 740 aa6.84□□□□□ -1.31
LCP5YER127W ZDS2P54786 942 aa6.84□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 98.2 ms