RNA–Protein interactions for RNA: YDR211W

GCD6, Transcript of Catalytic epsilon subunit of the translation initiation factor eIF2B, yeast

Gene GCD6, Length 2,139 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GCD6	YDR211W	CNA1	P23287	553 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	PRR1	P28708	518 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	FUN30	P31380	1131 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	UGP1	P32861	499 aa	Known RBP	3.02	□□□□□ -1.93
GCD6	YDR211W	AGP2	P38090	596 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	CTP1	P38152	299 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	SWC5	P38326	303 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	TSL1	P38427	1098 aa	Known RBP	3.02	□□□□□ -1.93
GCD6	YDR211W	CKB2	P38930	258 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	NIT1	P40447	199 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	PRM2	P40534	656 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.02	□□□□□ -1.93	not detected
GCD6	YDR211W	RPS7B	P48164	190 aa	Known RBP	3.02	□□□□□ -1.93
GCD6	YDR211W	HLJ1	P48353	224 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	RFX1	P48743	811 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	CUL3	P53202	744 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	GTF1	P53260	183 aa	Predicted RBP	3.02	□□□□□ -1.93
GCD6	YDR211W	YGR127W	P53275	312 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	LSC1	P53598	329 aa	Known RBP	3.02	□□□□□ -1.93
GCD6	YDR211W	SNU56	Q03782	492 aa	Known RBP	3.02	□□□□□ -1.93
GCD6	YDR211W	SPC2	Q04969	178 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	ATG17	Q06410	417 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	CDD1	Q06549	142 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	SMC5	Q08204	1093 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	CUE5	Q08412	411 aa	Known RBP	3.02	□□□□□ -1.93
GCD6	YDR211W	YOR352W	Q08816	343 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	TAF3	Q12297	353 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	LDB17	Q12342	491 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	GIS3	Q12418	502 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	ERG20	P08524	352 aa	Known RBP	3.02	□□□□□ -1.93
GCD6	YDR211W	ASP3-2	P0CX77	362 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	ASP3-3	P0CX78	362 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	ASP3-4	P0CX79	362 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	ASP3-1	P0CZ17	362 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	SNF4	P12904	322 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	NAT1	P12945	854 aa	Known RBP	3.02	□□□□□ -1.93
GCD6	YDR211W	TOP3	P13099	656 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	SEC63	P14906	663 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	PHO81	P17442	1178 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	COX11	P19516	300 aa	Known RBP	3.02	□□□□□ -1.93
GCD6	YDR211W	TSR4	P25040	408 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	YCL068C	P25593	260 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	MSH2	P25847	964 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	PTP2	P29461	750 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	URA10	P30402	227 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	RAD16	P31244	790 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	NGG1	P32494	702 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	PEX6	P33760	1030 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	SRB2	P34162	210 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	THI80	P35202	319 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	ASK1	P35734	292 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	KAP104	P38217	918 aa	Known RBP	3.02	□□□□□ -1.93
GCD6	YDR211W	YBR138C	P38277	524 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	ATG12	P38316	186 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	TDP1	P38319	544 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	PEX18	P38855	283 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	RSP5	P39940	809 aa	Known RBP	3.02	□□□□□ -1.93
GCD6	YDR211W	UBP7	P40453	1071 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	CAB2	P40506	365 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	LAM5	P43560	674 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	RRT5	P43607	289 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	ASN2	P49090	572 aa	Known RBP	3.02	□□□□□ -1.93
GCD6	YDR211W	AIF1	P52923	378 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	NMA2	P53204	395 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	PEX8	P53248	589 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	YKR005C	Q02203	525 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	SLD5	Q03406	294 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	YMR155W	Q03795	547 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	TSR2	Q06672	205 aa	Known RBP	3.02	□□□□□ -1.93
GCD6	YDR211W	CDA1	Q06702	301 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	AIM39	Q08223	395 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	SLD7	Q08457	257 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	SLF1	Q12034	447 aa	Known RBP	3.02	□□□□□ -1.93
GCD6	YDR211W	VPS54	Q12071	889 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	MSH5	Q12175	901 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	ERP3	Q12403	225 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	RGS2	Q99188	309 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	AI5_ALPHA	Q9ZZX1	630 aa		3.02	□□□□□ -1.93
GCD6	YDR211W	GPA2	P10823	449 aa		3.01	□□□□□ -1.93
GCD6	YDR211W	ENA1	P13587	1091 aa		3.01	□□□□□ -1.93
GCD6	YDR211W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	3.01	□□□□□ -1.93	not detected
GCD6	YDR211W	TKL1	P23254	680 aa	Known RBP	3.01	□□□□□ -1.93
GCD6	YDR211W	TFC1	P32367	649 aa		3.01	□□□□□ -1.93
GCD6	YDR211W	TFB1	P32776	642 aa		3.01	□□□□□ -1.93
GCD6	YDR211W	SKG6	P32900	734 aa	Predicted RBP	3.01	□□□□□ -1.93
GCD6	YDR211W	SRP101	P32916	621 aa		3.01	□□□□□ -1.93
GCD6	YDR211W	HSL7	P38274	827 aa		3.01	□□□□□ -1.93
GCD6	YDR211W	RIM4	P38741	713 aa		3.01	□□□□□ -1.93
GCD6	YDR211W	ECM10	P39987	644 aa		3.01	□□□□□ -1.93
GCD6	YDR211W	ZRG8	P40021	1076 aa		3.01	□□□□□ -1.93
GCD6	YDR211W	RIC1	P40395	1056 aa		3.01	□□□□□ -1.93
GCD6	YDR211W	SNL1	P40548	159 aa		3.01	□□□□□ -1.93
GCD6	YDR211W	SCS3	P53012	380 aa		3.01	□□□□□ -1.93
GCD6	YDR211W	RRT6	P53117	311 aa	Predicted RBP	3.01	□□□□□ -1.93
GCD6	YDR211W	MNP1	P53163	194 aa	Predicted RBP	3.01	□□□□□ -1.93
GCD6	YDR211W	YGR283C	P53336	341 aa	Predicted RBP	3.01	□□□□□ -1.93
GCD6	YDR211W	TIM11	P81449	96 aa	Predicted RBP	3.01	□□□□□ -1.93
GCD6	YDR211W	ENA2	Q01896	1091 aa		3.01	□□□□□ -1.93
GCD6	YDR211W	GCN5	Q03330	439 aa		3.01	□□□□□ -1.93
GCD6	YDR211W	YDR132C	Q03900	495 aa		3.01	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 76.7 ms