RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W PGA3Q12746 312 aaKnown RBP2.69□□□□□ -1.98
VPS41YDR080W FOB1O13329 566 aa2.68□□□□□ -1.98
VPS41YDR080W ABF1P14164 731 aa2.68□□□□□ -1.98
VPS41YDR080W FRS2P15625 503 aaKnown RBP2.68□□□□□ -1.98
VPS41YDR080W VPS34P22543 875 aa2.68□□□□□ -1.98
VPS41YDR080W PRR1P28708 518 aa2.68□□□□□ -1.98
VPS41YDR080W HXT4P32467 576 aa2.68□□□□□ -1.98
VPS41YDR080W APL3P38065 1025 aa2.68□□□□□ -1.98
VPS41YDR080W GPP2P40106 250 aaKnown RBP2.68□□□□□ -1.98
VPS41YDR080W ORC5P50874 479 aa2.68□□□□□ -1.98
VPS41YDR080W USA1Q03714 838 aa2.68□□□□□ -1.98
VPS41YDR080W DON1Q05610 365 aa2.68□□□□□ -1.98
VPS41YDR080W ECM22Q05958 814 aaPredicted RBP2.68□□□□□ -1.98
VPS41YDR080W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.68□□□□□ -1.98not detected
VPS41YDR080W UGP1P32861 499 aaKnown RBP2.68□□□□□ -1.98
VPS41YDR080W RMA1P36001 430 aaKnown RBP2.68□□□□□ -1.98
VPS41YDR080W FET5P43561 622 aa2.68□□□□□ -1.98
VPS41YDR080W YGR237CP50089 785 aa2.68□□□□□ -1.98
VPS41YDR080W WAR1Q03631 944 aa2.68□□□□□ -1.98
VPS41YDR080W RTK1Q12100 620 aaPredicted RBP2.68□□□□□ -1.98
VPS41YDR080W FRE7Q12333 620 aa2.68□□□□□ -1.98
VPS41YDR080W GIS3Q12418 502 aa2.68□□□□□ -1.98
VPS41YDR080W GAL4P04386 881 aa2.67□□□□□ -1.98
VPS41YDR080W ADE3P07245 946 aaKnown RBP2.67□□□□□ -1.98
VPS41YDR080W SAT4P25333 603 aaKnown RBP2.67□□□□□ -1.98
VPS41YDR080W YKL023WP36103 277 aaKnown RBP2.67□□□□□ -1.98
VPS41YDR080W YBR225WP38321 900 aa2.67□□□□□ -1.98
VPS41YDR080W PMT3P47190 753 aa2.67□□□□□ -1.98
VPS41YDR080W COQ5P49017 307 aa2.67□□□□□ -1.98
VPS41YDR080W CBK1P53894 756 aa2.67□□□□□ -1.98
VPS41YDR080W SNU56Q03782 492 aaKnown RBP2.67□□□□□ -1.98
VPS41YDR080W PRM6Q04705 352 aa2.67□□□□□ -1.98
VPS41YDR080W YLH47Q06493 454 aa2.67□□□□□ -1.98
VPS41YDR080W PSK2Q08217 1101 aa2.67□□□□□ -1.98
VPS41YDR080W GET3Q12154 354 aaKnown RBP2.67□□□□□ -1.98
VPS41YDR080W YEL076C-AP0CX16 216 aa2.67□□□□□ -1.98
VPS41YDR080W YLR464WP0CX17 216 aa2.67□□□□□ -1.98
VPS41YDR080W HOP1P20050 605 aa2.67□□□□□ -1.98
VPS41YDR080W NTH1P32356 751 aa2.67□□□□□ -1.98
VPS41YDR080W YEL076CP39971 216 aa2.67□□□□□ -1.98
VPS41YDR080W ERG10P41338 398 aaKnown RBP2.67□□□□□ -1.98
VPS41YDR080W YIP4P53093 235 aa2.67□□□□□ -1.98
VPS41YDR080W YGL081WP53156 320 aa2.67□□□□□ -1.98
VPS41YDR080W TRS23Q03784 219 aa2.67□□□□□ -1.98
VPS41YDR080W ULA1Q12059 462 aa2.67□□□□□ -1.98
VPS41YDR080W YDR061WQ12298 539 aa2.67□□□□□ -1.98
VPS41YDR080W COX3P00420 269 aa2.67□□□□□ -1.98
VPS41YDR080W TPK2P06245 380 aa2.67□□□□□ -1.98
VPS41YDR080W PMA2P19657 947 aa2.67□□□□□ -1.98
VPS41YDR080W AAD3P25612 363 aa2.67□□□□□ -1.98
VPS41YDR080W YKL050CP35736 922 aa2.67□□□□□ -1.98
VPS41YDR080W SIF2P38262 535 aa2.67□□□□□ -1.98
VPS41YDR080W ERV46P39727 415 aa2.67□□□□□ -1.98
VPS41YDR080W LRO1P40345 661 aa2.67□□□□□ -1.98
VPS41YDR080W IRC5P43610 853 aa2.67□□□□□ -1.98
VPS41YDR080W TAX4P47030 604 aa2.67□□□□□ -1.98
VPS41YDR080W COQ6P53318 479 aa2.67□□□□□ -1.98
VPS41YDR080W DOS2P54858 310 aa2.67□□□□□ -1.98
VPS41YDR080W HLR1Q04429 423 aa2.67□□□□□ -1.98
VPS41YDR080W RTN1Q04947 295 aaKnown RBP2.67□□□□□ -1.98
VPS41YDR080W RLP24Q07915 199 aaKnown RBP2.67□□□□□ -1.98
VPS41YDR080W NBL1Q3E7Y6 73 aa2.67□□□□□ -1.98
VPS41YDR080W RPL4AP10664 362 aaKnown RBP2.66□□□□□ -1.98
VPS41YDR080W SGE1P33335 543 aa2.66□□□□□ -1.98
VPS41YDR080W PIH1P38768 344 aa2.66□□□□□ -1.98
VPS41YDR080W PPE1P38796 400 aa2.66□□□□□ -1.98
VPS41YDR080W PTI1P39927 425 aaPredicted RBP2.66□□□□□ -1.98
VPS41YDR080W DSE1P40077 573 aa2.66□□□□□ -1.98
VPS41YDR080W YJR054WP47114 497 aa2.66□□□□□ -1.98
VPS41YDR080W MRX6P48564 524 aa2.66□□□□□ -1.98
VPS41YDR080W RPL4BP49626 362 aaKnown RBP2.66□□□□□ -1.98
VPS41YDR080W PYK2P52489 506 aaKnown RBP2.66□□□□□ -1.98
VPS41YDR080W RSC1P53236 928 aa2.66□□□□□ -1.98
VPS41YDR080W CSR1Q06705 408 aaKnown RBP2.66□□□□□ -1.98
VPS41YDR080W YPR027CQ12079 277 aa2.66□□□□□ -1.98
VPS41YDR080W COX11P19516 300 aaKnown RBP2.66□□□□□ -1.98
VPS41YDR080W SEC15P22224 910 aa2.66□□□□□ -1.98
VPS41YDR080W CNE1P27825 502 aa2.66□□□□□ -1.98
VPS41YDR080W ERC1P38767 581 aa2.66□□□□□ -1.98
VPS41YDR080W PFS1P38872 237 aa2.66□□□□□ -1.98
VPS41YDR080W EXO1P39875 702 aa2.66□□□□□ -1.98
VPS41YDR080W DUG1P43616 481 aaKnown RBP2.66□□□□□ -1.98
VPS41YDR080W SMC3P47037 1230 aa2.66□□□□□ -1.98
VPS41YDR080W BUD17P53727 317 aa2.66□□□□□ -1.98
VPS41YDR080W NGL1Q08213 363 aaKnown RBP2.66□□□□□ -1.98
VPS41YDR080W YIL046W-AQ3E7Z4 54 aa2.66□□□□□ -1.98
VPS41YDR080W DUN1P39009 513 aa2.65□□□□□ -1.98
VPS41YDR080W RIM13Q03792 727 aa2.65□□□□□ -1.98
VPS41YDR080W YLR456WQ06199 204 aa2.65□□□□□ -1.98
VPS41YDR080W LCB4Q12246 624 aa2.65□□□□□ -1.98
VPS41YDR080W ADE5,7P07244 802 aaKnown RBP2.65□□□□□ -1.99
VPS41YDR080W MSF1P08425 469 aa2.65□□□□□ -1.99
VPS41YDR080W FRE1P32791 686 aa2.65□□□□□ -1.99
VPS41YDR080W PCA1P38360 1216 aa2.65□□□□□ -1.99
VPS41YDR080W ULP2P40537 1034 aaPredicted RBP2.65□□□□□ -1.99
VPS41YDR080W GUF1P46943 645 aa2.65□□□□□ -1.99
VPS41YDR080W NIT2P47016 307 aa2.65□□□□□ -1.99
VPS41YDR080W BNA3P47039 444 aaKnown RBP2.65□□□□□ -1.99
VPS41YDR080W YJR120WP47157 116 aa2.65□□□□□ -1.99
VPS41YDR080W PEX14P53112 341 aa2.65□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms