RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C UPC2Q12151 913 aa5.2□□□□□ -1.58
SCM3YDL139C HRT3Q12347 344 aa5.2□□□□□ -1.58
SCM3YDL139C OCA6Q12454 224 aa5.2□□□□□ -1.58
SCM3YDL139C TMA17Q12513 150 aa5.2□□□□□ -1.58
SCM3YDL139C YLR149CQ99296 730 aa5.2□□□□□ -1.58
SCM3YDL139C GAL80P04387 435 aa5.19□□□□□ -1.58
SCM3YDL139C ADH4P10127 382 aa5.19□□□□□ -1.58
SCM3YDL139C SRV2P17555 526 aaKnown RBP5.19□□□□□ -1.58
SCM3YDL139C MET16P18408 261 aaPredicted RBP5.19□□□□□ -1.58
SCM3YDL139C PEX1P24004 1043 aa5.19□□□□□ -1.58
SCM3YDL139C ILV6P25605 309 aaKnown RBP5.19□□□□□ -1.58
SCM3YDL139C GAC1P28006 793 aa5.19□□□□□ -1.58
SCM3YDL139C PMI40P29952 429 aaKnown RBP5.19□□□□□ -1.58
SCM3YDL139C LST4P34239 828 aa5.19□□□□□ -1.58
SCM3YDL139C CCL1P37366 393 aa5.19□□□□□ -1.58
SCM3YDL139C CKB2P38930 258 aa5.19□□□□□ -1.58
SCM3YDL139C URM1P40554 99 aaPredicted RBP5.19□□□□□ -1.58
SCM3YDL139C INA22P40576 216 aa5.19□□□□□ -1.58
SCM3YDL139C CHS6P40955 746 aa5.19□□□□□ -1.58
SCM3YDL139C TDA10P42938 290 aa5.19□□□□□ -1.58
SCM3YDL139C YJL107CP42947 387 aa5.19□□□□□ -1.58
SCM3YDL139C YJR120WP47157 116 aa5.19□□□□□ -1.58
SCM3YDL139C NPY1P53164 384 aa5.19□□□□□ -1.58
SCM3YDL139C YNL134CP53912 376 aaKnown RBP5.19□□□□□ -1.58
SCM3YDL139C PIR3Q03180 325 aa5.19□□□□□ -1.58
SCM3YDL139C SPG3Q04398 127 aaPredicted RBP5.19□□□□□ -1.58
SCM3YDL139C OMS1Q06668 471 aa5.19□□□□□ -1.58
SCM3YDL139C YET3Q07451 203 aa5.19□□□□□ -1.58
SCM3YDL139C RIO1Q12196 484 aaKnown RBP5.19□□□□□ -1.58
SCM3YDL139C YMR030W-AQ3E760 96 aa5.19□□□□□ -1.58
SCM3YDL139C YOL087CQ99247 1116 aa5.19□□□□□ -1.58
SCM3YDL139C AI5_ALPHAQ9ZZX1 630 aa5.19□□□□□ -1.58
SCM3YDL139C JIP3O13555 125 aa5.18□□□□□ -1.58
SCM3YDL139C COX5AP00424 153 aa5.18□□□□□ -1.58
SCM3YDL139C HIS5P07172 385 aa5.18□□□□□ -1.58
SCM3YDL139C ERG20P08524 352 aaKnown RBP5.18□□□□□ -1.58
SCM3YDL139C SSC1P0CS90 654 aaKnown RBP5.18□□□□□ -1.58
SCM3YDL139C ARG1P22768 420 aa5.18□□□□□ -1.58
SCM3YDL139C STE14P32584 239 aa5.18□□□□□ -1.58
SCM3YDL139C ETR1P38071 380 aa5.18□□□□□ -1.58
SCM3YDL139C YMC2P38087 329 aa5.18□□□□□ -1.58
SCM3YDL139C MED8P38304 223 aa5.18□□□□□ -1.58
SCM3YDL139C POP4P38336 279 aa5.18□□□□□ -1.58
SCM3YDL139C MSR1P38714 643 aa5.18□□□□□ -1.58
SCM3YDL139C SAK1P38990 1142 aa5.18□□□□□ -1.58
SCM3YDL139C ERP2P39704 215 aa5.18□□□□□ -1.58
SCM3YDL139C TRF5P48561 642 aaKnown RBP5.18□□□□□ -1.58
SCM3YDL139C MCM6P53091 1017 aaKnown RBP5.18□□□□□ -1.58
SCM3YDL139C YMR027WQ04371 470 aa5.18□□□□□ -1.58
SCM3YDL139C HFD1Q04458 532 aa5.18□□□□□ -1.58
SCM3YDL139C FAR8Q05040 523 aa5.18□□□□□ -1.58
SCM3YDL139C NCA2Q12374 616 aa5.18□□□□□ -1.58
SCM3YDL139C URA7P28274 579 aaKnown RBP5.17□□□□□ -1.58
SCM3YDL139C TKL2P33315 681 aa5.17□□□□□ -1.58
SCM3YDL139C NOP4P37838 685 aaKnown RBP5.17□□□□□ -1.58
SCM3YDL139C YHR078WP38799 552 aa5.17□□□□□ -1.58
SCM3YDL139C SPC72P39723 622 aa5.17□□□□□ -1.58
SCM3YDL139C STL1P39932 569 aa5.17□□□□□ -1.58
SCM3YDL139C FAF1P40546 346 aaPredicted RBP5.17□□□□□ -1.58
SCM3YDL139C YFL052WP43551 465 aa5.17□□□□□ -1.58
SCM3YDL139C CHA4P43634 648 aa5.17□□□□□ -1.58
SCM3YDL139C GUF1P46943 645 aa5.17□□□□□ -1.58
SCM3YDL139C SSY5P47002 699 aa5.17□□□□□ -1.58
SCM3YDL139C BNA2P47125 453 aa5.17□□□□□ -1.58
SCM3YDL139C CEG1Q01159 459 aaPredicted RBP5.17□□□□□ -1.58
SCM3YDL139C YMR209CQ03648 457 aa5.17□□□□□ -1.58
SCM3YDL139C EMI2Q04409 500 aaKnown RBP5.17□□□□□ -1.58
SCM3YDL139C YLR224WQ05947 369 aa5.17□□□□□ -1.58
SCM3YDL139C ECM22Q05958 814 aaPredicted RBP5.17□□□□□ -1.58
SCM3YDL139C ECM30Q06673 1274 aa5.17□□□□□ -1.58
SCM3YDL139C GPM2Q12008 311 aa5.17□□□□□ -1.58
SCM3YDL139C VPS5Q92331 675 aa5.17□□□□□ -1.58
SCM3YDL139C IMA3P0CW40 589 aa5.16□□□□□ -1.58
SCM3YDL139C IMA4P0CW41 589 aa5.16□□□□□ -1.58
SCM3YDL139C GLN4P13188 809 aaKnown RBP5.16□□□□□ -1.58
SCM3YDL139C PMS1P14242 873 aa5.16□□□□□ -1.58
SCM3YDL139C PRP16P15938 1071 aaPredicted RBP5.16□□□□□ -1.58
SCM3YDL139C SPO16P17122 198 aa5.16□□□□□ -1.58
SCM3YDL139C SED4P25365 1065 aa5.16□□□□□ -1.58
SCM3YDL139C GFD2P25370 566 aaKnown RBP5.16□□□□□ -1.58
SCM3YDL139C URA8P38627 578 aaPredicted RBP5.16□□□□□ -1.58
SCM3YDL139C YAT2P40017 923 aa5.16□□□□□ -1.58
SCM3YDL139C SCC4P40090 624 aa5.16□□□□□ -1.58
SCM3YDL139C ESL1P40456 1118 aa5.16□□□□□ -1.58
SCM3YDL139C ASN2P49090 572 aaKnown RBP5.16□□□□□ -1.58
SCM3YDL139C HOP2P53187 214 aa5.16□□□□□ -1.58
SCM3YDL139C COG6P53959 839 aa5.16□□□□□ -1.58
SCM3YDL139C REG1Q00816 1014 aa5.16□□□□□ -1.58
SCM3YDL139C SLU7Q02775 382 aaKnown RBP5.16□□□□□ -1.58
SCM3YDL139C SKY1Q03656 742 aa5.16□□□□□ -1.58
SCM3YDL139C ASM4Q05166 528 aa5.16□□□□□ -1.58
SCM3YDL139C IMA2Q08295 589 aa5.16□□□□□ -1.58
SCM3YDL139C NBP2Q12163 236 aa5.16□□□□□ -1.58
SCM3YDL139C RUD3Q12234 484 aaKnown RBP5.16□□□□□ -1.58
SCM3YDL139C DEP1P31385 405 aa5.15□□□□□ -1.59
SCM3YDL139C DSS4P32601 143 aa5.15□□□□□ -1.59
SCM3YDL139C NFU1P32860 256 aa5.15□□□□□ -1.59
SCM3YDL139C CYM1P32898 989 aa5.15□□□□□ -1.59
SCM3YDL139C UBC6P33296 250 aaPredicted RBP5.15□□□□□ -1.59
SCM3YDL139C RRN3P36070 627 aa5.15□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms