RNA–Protein interactions for RNA: YPL115C

BEM3, Transcript of Rho GTPase activating protein (RhoGAP), yeast

Gene BEM3, Length 3,387 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BEM3	YPL115C	SIP1	P32578	815 aa		0.87	□□□□□ -2.27
BEM3	YPL115C	CNS1	P33313	385 aa		0.87	□□□□□ -2.27
BEM3	YPL115C	UBP11	P36026	717 aa		0.87	□□□□□ -2.27
BEM3	YPL115C	RKM3	P38222	552 aa		0.87	□□□□□ -2.27
BEM3	YPL115C	TIF5	P38431	405 aa	Known RBP	0.87	□□□□□ -2.27
BEM3	YPL115C	RTS1	P38903	757 aa		0.87	□□□□□ -2.27
BEM3	YPL115C	BNA1	P47096	177 aa		0.87	□□□□□ -2.27
BEM3	YPL115C	GTR1	Q00582	310 aa		0.87	□□□□□ -2.27
BEM3	YPL115C	YVH1	Q02256	364 aa	Known RBP	0.87	□□□□□ -2.27
BEM3	YPL115C	POS5	Q06892	414 aa		0.87	□□□□□ -2.27
BEM3	YPL115C	GPN2	Q08726	347 aa	Predicted RBP	0.87	□□□□□ -2.27
BEM3	YPL115C	PMS1	P14242	873 aa		0.87	□□□□□ -2.27
BEM3	YPL115C	DBF20	P32328	564 aa		0.87	□□□□□ -2.27
BEM3	YPL115C	ARP2	P32381	391 aa	Known RBP	0.87	□□□□□ -2.27
BEM3	YPL115C	PDR3	P33200	976 aa		0.87	□□□□□ -2.27
BEM3	YPL115C	RPF2	P36160	344 aa	Known RBP	0.87	□□□□□ -2.27
BEM3	YPL115C	SEC31	P38968	1273 aa	Known RBP	0.87	□□□□□ -2.27
BEM3	YPL115C	VID27	P40157	782 aa		0.87	□□□□□ -2.27
BEM3	YPL115C	YDL186W	P48568	277 aa		0.87	□□□□□ -2.27
BEM3	YPL115C	RRT6	P53117	311 aa	Predicted RBP	0.87	□□□□□ -2.27
BEM3	YPL115C	TEP1	P53916	434 aa		0.87	□□□□□ -2.27
BEM3	YPL115C	YNL058C	P53947	316 aa		0.87	□□□□□ -2.27
BEM3	YPL115C	ARP7	Q12406	477 aa		0.87	□□□□□ -2.27
BEM3	YPL115C	MDN1	Q12019	4910 aa	Known RBP	0.87	□□□□□ -2.27
BEM3	YPL115C	TY1B-BR	Q12193	1756 aa		0.87	□□□□□ -2.27
BEM3	YPL115C	TY1B-GR3	Q12316	1755 aa		0.87	□□□□□ -2.27
BEM3	YPL115C	TY1B-OR	Q92393	1755 aa		0.87	□□□□□ -2.27
BEM3	YPL115C	LRE1	P25579	583 aa	Known RBP	0.87	□□□□□ -2.27
BEM3	YPL115C	ADE17	P38009	592 aa	Known RBP	0.87	□□□□□ -2.27
BEM3	YPL115C	RFC1	P38630	861 aa	Known RBP	0.87	□□□□□ -2.27
BEM3	YPL115C	FMP10	P40098	244 aa		0.87	□□□□□ -2.27
BEM3	YPL115C	VRG4	P40107	337 aa		0.87	□□□□□ -2.27
BEM3	YPL115C	RPR2	P40571	144 aa		0.87	□□□□□ -2.27
BEM3	YPL115C	ATG27	P46989	271 aa		0.87	□□□□□ -2.27
BEM3	YPL115C	YGL081W	P53156	320 aa		0.87	□□□□□ -2.27
BEM3	YPL115C	XRN1	P22147	1528 aa	Known RBP	0.86	□□□□□ -2.27
BEM3	YPL115C	YLR302C	O13544	120 aa		0.86	□□□□□ -2.27
BEM3	YPL115C	RPL15A	P05748	204 aa	Known RBP	0.86	□□□□□ -2.27
BEM3	YPL115C	NOP1	P15646	327 aa	Known RBP	0.86	□□□□□ -2.27
BEM3	YPL115C	GLN3	P18494	730 aa		0.86	□□□□□ -2.27
BEM3	YPL115C	PTP2	P29461	750 aa		0.86	□□□□□ -2.27
BEM3	YPL115C	RAD24	P32641	659 aa		0.86	□□□□□ -2.27
BEM3	YPL115C	PSD1	P39006	500 aa		0.86	□□□□□ -2.27
BEM3	YPL115C	SMK1	P41808	388 aa		0.86	□□□□□ -2.27
BEM3	YPL115C	NNF2	P53253	936 aa		0.86	□□□□□ -2.27
BEM3	YPL115C	CPR6	P53691	371 aa	Known RBP	0.86	□□□□□ -2.27
BEM3	YPL115C	SWF1	Q04629	336 aa		0.86	□□□□□ -2.27
BEM3	YPL115C	BLS1	Q06071	122 aa		0.86	□□□□□ -2.27
BEM3	YPL115C	RPS10A	Q08745	105 aa	Predicted RBP	0.86	□□□□□ -2.27
BEM3	YPL115C	RRP6	Q12149	733 aa	Known RBP	0.86	□□□□□ -2.27
BEM3	YPL115C	PDR15	Q04182	1529 aa	Known RBP	0.86	□□□□□ -2.27
BEM3	YPL115C	ILV2	P07342	687 aa	Known RBP	0.86	□□□□□ -2.27
BEM3	YPL115C	PGS1	P25578	521 aa		0.86	□□□□□ -2.27
BEM3	YPL115C	SCO2	P38072	301 aa		0.86	□□□□□ -2.27
BEM3	YPL115C	FAA2	P39518	744 aa		0.86	□□□□□ -2.27
BEM3	YPL115C	PHO90	P39535	881 aa		0.86	□□□□□ -2.27
BEM3	YPL115C	PUG1	P40100	303 aa		0.86	□□□□□ -2.27
BEM3	YPL115C	RTS2	P40962	232 aa		0.86	□□□□□ -2.27
BEM3	YPL115C	RPT6	Q01939	405 aa	Known RBP	0.86	□□□□□ -2.27
BEM3	YPL115C	RBA50	Q04418	439 aa		0.86	□□□□□ -2.27
BEM3	YPL115C	YPL272C	Q08984	517 aa		0.86	□□□□□ -2.27
BEM3	YPL115C	ULS1	Q08562	1619 aa		0.86	□□□□□ -2.27
BEM3	YPL115C	CHC1	P22137	1653 aa	Known RBP	0.85	□□□□□ -2.27
BEM3	YPL115C	PGI1	P12709	554 aa	Known RBP	0.85	□□□□□ -2.27
BEM3	YPL115C	GUK1	P15454	187 aa	Known RBP	0.85	□□□□□ -2.27
BEM3	YPL115C	SAN1	P22470	610 aa		0.85	□□□□□ -2.27
BEM3	YPL115C	YPK3	P38070	525 aa		0.85	□□□□□ -2.27
BEM3	YPL115C	RIM2	P38127	377 aa		0.85	□□□□□ -2.27
BEM3	YPL115C	RPN11	P43588	306 aa	Known RBP	0.85	□□□□□ -2.27
BEM3	YPL115C	SGF73	P53165	657 aa		0.85	□□□□□ -2.27
BEM3	YPL115C	VPS64	Q03944	604 aa		0.85	□□□□□ -2.27
BEM3	YPL115C	YDR109C	Q04585	715 aa		0.85	□□□□□ -2.27
BEM3	YPL115C	SMA2	Q04658	369 aa		0.85	□□□□□ -2.27
BEM3	YPL115C	BAG7	Q12128	409 aa		0.85	□□□□□ -2.27
BEM3	YPL115C	NCE102	Q12207	173 aa	RIP-Chip data	0.85	□□□□□ -2.27	not detected
BEM3	YPL115C	SUI3	P09064	285 aa	Known RBP	0.85	□□□□□ -2.27
BEM3	YPL115C	PDE1	P22434	369 aa		0.85	□□□□□ -2.27
BEM3	YPL115C	AGA1	P32323	725 aa		0.85	□□□□□ -2.27
BEM3	YPL115C	SDS22	P36047	338 aa		0.85	□□□□□ -2.27
BEM3	YPL115C	ERP2	P39704	215 aa		0.85	□□□□□ -2.27
BEM3	YPL115C	YIR014W	P40570	242 aa		0.85	□□□□□ -2.27
BEM3	YPL115C	CTK2	P46962	323 aa		0.85	□□□□□ -2.27
BEM3	YPL115C	ATG36	P46983	293 aa		0.85	□□□□□ -2.27
BEM3	YPL115C	ARC35	P53731	342 aa	Known RBP	0.85	□□□□□ -2.27
BEM3	YPL115C	DNF2	Q12675	1612 aa		0.85	□□□□□ -2.27
BEM3	YPL115C	PIF1	P07271	859 aa		0.85	□□□□□ -2.27
BEM3	YPL115C	REV1	P12689	985 aa		0.85	□□□□□ -2.27
BEM3	YPL115C	AMD1	P15274	810 aa	Known RBP	0.85	□□□□□ -2.27
BEM3	YPL115C	LDB16	P25587	256 aa		0.85	□□□□□ -2.27
BEM3	YPL115C	FUN12	P39730	1002 aa	Known RBP	0.85	□□□□□ -2.27
BEM3	YPL115C	CAB2	P40506	365 aa		0.85	□□□□□ -2.27
BEM3	YPL115C	YFR020W	P43600	232 aa		0.85	□□□□□ -2.27
BEM3	YPL115C	RPS7B	P48164	190 aa	Known RBP	0.85	□□□□□ -2.27
BEM3	YPL115C	CTF18	P49956	741 aa		0.85	□□□□□ -2.27
BEM3	YPL115C	PYK2	P52489	506 aa	Known RBP	0.85	□□□□□ -2.27
BEM3	YPL115C	CSL4	P53859	292 aa	Predicted RBP	0.85	□□□□□ -2.27
BEM3	YPL115C	DUG3	P53871	357 aa		0.85	□□□□□ -2.27
BEM3	YPL115C	CBK1	P53894	756 aa		0.85	□□□□□ -2.27
BEM3	YPL115C	REG1	Q00816	1014 aa		0.85	□□□□□ -2.27
BEM3	YPL115C	IWR1	Q07532	353 aa	Predicted RBP	0.85	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms