RNA–Protein interactions for RNA: YLR353W

BUD8, Transcript of Protein involved in bud-site selection, yeast

Gene BUD8, Length 1,812 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BUD8	YLR353W	COY1	P34237	679 aa		4.89	□□□□□ -1.63
BUD8	YLR353W	RPS0B	P46654	252 aa	Known RBP	4.89	□□□□□ -1.63
BUD8	YLR353W	NPA3	P47122	385 aa		4.89	□□□□□ -1.63
BUD8	YLR353W	PHO23	P50947	330 aa		4.89	□□□□□ -1.63
BUD8	YLR353W	YML037C	Q03703	340 aa		4.89	□□□□□ -1.63
BUD8	YLR353W	VPS20	Q04272	221 aa		4.89	□□□□□ -1.63
BUD8	YLR353W	GSF2	Q04697	403 aa	Known RBP	4.89	□□□□□ -1.63
BUD8	YLR353W	YDL086W	Q07505	273 aa		4.89	□□□□□ -1.63
BUD8	YLR353W	AIM39	Q08223	395 aa		4.89	□□□□□ -1.63
BUD8	YLR353W	SUP35	P05453	685 aa	Known RBP	4.88	□□□□□ -1.63
BUD8	YLR353W	PPR1	P07272	904 aa	Predicted RBP	4.88	□□□□□ -1.63
BUD8	YLR353W	RNQ1	P25367	405 aa		4.88	□□□□□ -1.63
BUD8	YLR353W	HRR25	P29295	494 aa	Known RBP	4.88	□□□□□ -1.63
BUD8	YLR353W	ELM1	P32801	640 aa		4.88	□□□□□ -1.63
BUD8	YLR353W	NUP133	P36161	1157 aa		4.88	□□□□□ -1.63
BUD8	YLR353W	RSM25	P40496	264 aa		4.88	□□□□□ -1.63
BUD8	YLR353W	COG1	P53079	417 aa		4.88	□□□□□ -1.63
BUD8	YLR353W	PIB2	P53191	635 aa		4.88	□□□□□ -1.63
BUD8	YLR353W	USA1	Q03714	838 aa		4.88	□□□□□ -1.63
BUD8	YLR353W	YKU80	Q04437	629 aa		4.88	□□□□□ -1.63
BUD8	YLR353W	TY2A-LR1	P0C2J4	438 aa		4.88	□□□□□ -1.63
BUD8	YLR353W	TY2A-F	P0CX61	438 aa		4.88	□□□□□ -1.63
BUD8	YLR353W	TY2A-GR2	P0CX62	438 aa		4.88	□□□□□ -1.63
BUD8	YLR353W	PTP1	P25044	335 aa		4.88	□□□□□ -1.63
BUD8	YLR353W	TY2A-C	P25383	438 aa		4.88	□□□□□ -1.63
BUD8	YLR353W	DEF1	P35732	738 aa	Known RBP	4.88	□□□□□ -1.63
BUD8	YLR353W	ELF1	P36053	145 aa		4.88	□□□□□ -1.63
BUD8	YLR353W	ALD5	P40047	520 aa	Known RBP	4.88	□□□□□ -1.63
BUD8	YLR353W	IST3	P40565	148 aa	Predicted RBP	4.88	□□□□□ -1.63
BUD8	YLR353W	CIR1	P42940	261 aa		4.88	□□□□□ -1.63
BUD8	YLR353W	TAM41	P53230	385 aa		4.88	□□□□□ -1.63
BUD8	YLR353W	TY2A-DR2	Q03483	438 aa		4.88	□□□□□ -1.63
BUD8	YLR353W	YLR040C	Q07988	224 aa		4.88	□□□□□ -1.63
BUD8	YLR353W	USV1	Q12132	391 aa		4.88	□□□□□ -1.63
BUD8	YLR353W	TY2A-B	Q12260	438 aa		4.88	□□□□□ -1.63
BUD8	YLR353W	TY2A-OR2	Q12293	438 aa		4.88	□□□□□ -1.63
BUD8	YLR353W	NTO1	Q12311	748 aa		4.88	□□□□□ -1.63
BUD8	YLR353W	TY2A-DR1	Q12392	438 aa		4.88	□□□□□ -1.63
BUD8	YLR353W	TY2A-OR1	Q12439	438 aa		4.88	□□□□□ -1.63
BUD8	YLR353W	TY2A-DR3	Q99303	438 aa		4.88	□□□□□ -1.63
BUD8	YLR353W	NUP120	P35729	1037 aa		4.87	□□□□□ -1.63
BUD8	YLR353W	RKM3	P38222	552 aa		4.87	□□□□□ -1.63
BUD8	YLR353W	YHR097C	P38809	366 aa	Known RBP	4.87	□□□□□ -1.63
BUD8	YLR353W	RSC1	P53236	928 aa		4.87	□□□□□ -1.63
BUD8	YLR353W	YGR151C	P53287	111 aa		4.87	□□□□□ -1.63
BUD8	YLR353W	SNF12	P53628	566 aa		4.87	□□□□□ -1.63
BUD8	YLR353W	BSC5	P53755	489 aa		4.87	□□□□□ -1.63
BUD8	YLR353W	NBP2	Q12163	236 aa		4.87	□□□□□ -1.63
BUD8	YLR353W	PDR18	P53756	1333 aa		4.87	□□□□□ -1.63
BUD8	YLR353W	MDN1	Q12019	4910 aa	Known RBP	4.86	□□□□□ -1.63
BUD8	YLR353W	KRS1	P15180	591 aa	Known RBP	4.86	□□□□□ -1.63
BUD8	YLR353W	TPM1	P17536	199 aa	Known RBP	4.86	□□□□□ -1.63
BUD8	YLR353W	SDH8	P38345	138 aa		4.86	□□□□□ -1.63
BUD8	YLR353W	SIP4	P46954	829 aa		4.86	□□□□□ -1.63
BUD8	YLR353W	MLC1	P53141	149 aa		4.86	□□□□□ -1.63
BUD8	YLR353W	RKI1	Q12189	258 aa		4.86	□□□□□ -1.63
BUD8	YLR353W	YLR302C	O13544	120 aa		4.86	□□□□□ -1.63
BUD8	YLR353W	ATP2	P00830	511 aa	Known RBP	4.86	□□□□□ -1.63
BUD8	YLR353W	CTS1	P29029	562 aa		4.86	□□□□□ -1.63
BUD8	YLR353W	UTR4	P32626	227 aa		4.86	□□□□□ -1.63
BUD8	YLR353W	AAP1	P37898	856 aa	Known RBP	4.86	□□□□□ -1.63
BUD8	YLR353W	YJR061W	P40355	935 aa		4.86	□□□□□ -1.63
BUD8	YLR353W	SPO22	P40511	975 aa		4.86	□□□□□ -1.63
BUD8	YLR353W	ATG4	P53867	494 aa		4.86	□□□□□ -1.63
BUD8	YLR353W	MFM1	Q02783	413 aa		4.86	□□□□□ -1.63
BUD8	YLR353W	UFO1	Q04511	668 aa		4.86	□□□□□ -1.63
BUD8	YLR353W	RCO1	Q04779	684 aa		4.86	□□□□□ -1.63
BUD8	YLR353W	ETT1	Q08421	412 aa	Known RBP	4.86	□□□□□ -1.63
BUD8	YLR353W	RIM20	Q12033	661 aa		4.86	□□□□□ -1.63
BUD8	YLR353W	DYN1	P36022	4092 aa		4.85	□□□□□ -1.63
BUD8	YLR353W	FOB1	O13329	566 aa		4.85	□□□□□ -1.63
BUD8	YLR353W	RPB2	P08518	1224 aa	Known RBP	4.85	□□□□□ -1.63
BUD8	YLR353W	RPL19A	P0CX82	189 aa	Known RBP	4.85	□□□□□ -1.63
BUD8	YLR353W	RPL19B	P0CX83	189 aa	Predicted RBP	4.85	□□□□□ -1.63
BUD8	YLR353W	MET8	P15807	274 aa		4.85	□□□□□ -1.63
BUD8	YLR353W	SGF29	P25554	259 aa		4.85	□□□□□ -1.63
BUD8	YLR353W	CMK1	P27466	446 aa	Known RBP	4.85	□□□□□ -1.63
BUD8	YLR353W	MRP20	P32387	263 aa		4.85	□□□□□ -1.63
BUD8	YLR353W	APL3	P38065	1025 aa		4.85	□□□□□ -1.63
BUD8	YLR353W	PPS1	P38148	807 aa		4.85	□□□□□ -1.63
BUD8	YLR353W	SUL1	P38359	859 aa		4.85	□□□□□ -1.63
BUD8	YLR353W	YGL242C	P53066	181 aa		4.85	□□□□□ -1.63
BUD8	YLR353W	DIP5	P53388	608 aa		4.85	□□□□□ -1.63
BUD8	YLR353W	RPS15	Q01855	142 aa	Known RBP	4.85	□□□□□ -1.63
BUD8	YLR353W	SLD5	Q03406	294 aa		4.85	□□□□□ -1.63
BUD8	YLR353W	SKM1	Q12469	655 aa		4.85	□□□□□ -1.63
BUD8	YLR353W	YBR056W-A	I2HB52	66 aa		4.84	□□□□□ -1.63
BUD8	YLR353W	CCL1	P37366	393 aa		4.84	□□□□□ -1.63
BUD8	YLR353W	PTI1	P39927	425 aa	Predicted RBP	4.84	□□□□□ -1.63
BUD8	YLR353W	BUD16	P39988	312 aa		4.84	□□□□□ -1.63
BUD8	YLR353W	THI6	P41835	540 aa		4.84	□□□□□ -1.63
BUD8	YLR353W	YFH7	P43591	353 aa		4.84	□□□□□ -1.63
BUD8	YLR353W	ARC1	P46672	376 aa	Known RBP	4.84	□□□□□ -1.63
BUD8	YLR353W	ASE1	P50275	885 aa		4.84	□□□□□ -1.63
BUD8	YLR353W	YGL039W	P53183	348 aa	Known RBP	4.84	□□□□□ -1.63
BUD8	YLR353W	RBG2	P53295	368 aa	Known RBP	4.84	□□□□□ -1.63
BUD8	YLR353W	REG1	Q00816	1014 aa		4.84	□□□□□ -1.63
BUD8	YLR353W	MTG1	Q03151	367 aa	Predicted RBP	4.84	□□□□□ -1.63
BUD8	YLR353W	YBR255C-A	Q3E776	120 aa		4.84	□□□□□ -1.63
BUD8	YLR353W	PNO1	Q99216	274 aa	Known RBP	4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms