RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C ARF3P40994 183 aaRIP-Chip data1.63□□□□□ -2.15not detected
VPS55YJR044C RMD8P43620 662 aa1.63□□□□□ -2.15
VPS55YJR044C MRPL19P53875 158 aa1.63□□□□□ -2.15
VPS55YJR044C SXM1Q04175 944 aaKnown RBP1.63□□□□□ -2.15
VPS55YJR044C CAC2Q04199 468 aa1.63□□□□□ -2.15
VPS55YJR044C EIS1Q05050 843 aaKnown RBP1.63□□□□□ -2.15
VPS55YJR044C YLR287CQ05881 355 aa1.63□□□□□ -2.15
VPS55YJR044C VID22Q05934 901 aa1.63□□□□□ -2.15
VPS55YJR044C IWR1Q07532 353 aaPredicted RBP1.63□□□□□ -2.15
VPS55YJR044C GRC3Q07845 632 aa1.63□□□□□ -2.15
VPS55YJR044C RRG1Q12167 365 aaPredicted RBP1.63□□□□□ -2.15
VPS55YJR044C YBR298C-AQ8TGK4 73 aa1.63□□□□□ -2.15
VPS55YJR044C SPT7P35177 1332 aa1.63□□□□□ -2.15
VPS55YJR044C YER145C-AA0A023PYF4 145 aa1.62□□□□□ -2.15
VPS55YJR044C COX1P00401 534 aa1.62□□□□□ -2.15
VPS55YJR044C SNF1P06782 633 aaKnown RBP1.62□□□□□ -2.15
VPS55YJR044C PMS1P14242 873 aa1.62□□□□□ -2.15
VPS55YJR044C GUK1P15454 187 aaKnown RBP1.62□□□□□ -2.15
VPS55YJR044C UBC1P21734 215 aaKnown RBP1.62□□□□□ -2.15
VPS55YJR044C RIT1P23796 513 aa1.62□□□□□ -2.15
VPS55YJR044C YCL049CP25577 312 aa1.62□□□□□ -2.15
VPS55YJR044C CMK1P27466 446 aaKnown RBP1.62□□□□□ -2.15
VPS55YJR044C LAC1P28496 418 aa1.62□□□□□ -2.15
VPS55YJR044C IMP2'P32351 346 aa1.62□□□□□ -2.15
VPS55YJR044C AVT5P38176 459 aa1.62□□□□□ -2.15
VPS55YJR044C RFC1P38630 861 aaKnown RBP1.62□□□□□ -2.15
VPS55YJR044C SRP72P38688 640 aaKnown RBP1.62□□□□□ -2.15
VPS55YJR044C NPR3P38742 1146 aa1.62□□□□□ -2.15
VPS55YJR044C YLF2P38746 405 aa1.62□□□□□ -2.15
VPS55YJR044C STT3P39007 718 aaKnown RBP1.62□□□□□ -2.15
VPS55YJR044C SPC72P39723 622 aa1.62□□□□□ -2.15
VPS55YJR044C AFG3P39925 761 aa1.62□□□□□ -2.15
VPS55YJR044C PUG1P40100 303 aa1.62□□□□□ -2.15
VPS55YJR044C ESL1P40456 1118 aa1.62□□□□□ -2.15
VPS55YJR044C IST3P40565 148 aaPredicted RBP1.62□□□□□ -2.15
VPS55YJR044C SGM1P47166 707 aa1.62□□□□□ -2.15
VPS55YJR044C SHE10P53075 577 aa1.62□□□□□ -2.15
VPS55YJR044C CPR6P53691 371 aaKnown RBP1.62□□□□□ -2.15
VPS55YJR044C YNR061CP53747 219 aa1.62□□□□□ -2.15
VPS55YJR044C BSC5P53755 489 aa1.62□□□□□ -2.15
VPS55YJR044C VPS64Q03944 604 aa1.62□□□□□ -2.15
VPS55YJR044C SYF1Q04048 859 aaPredicted RBP1.62□□□□□ -2.15
VPS55YJR044C PIG1Q06216 648 aa1.62□□□□□ -2.15
VPS55YJR044C VIP1Q06685 1146 aaKnown RBP1.62□□□□□ -2.15
VPS55YJR044C POS5Q06892 414 aa1.62□□□□□ -2.15
VPS55YJR044C CRD1Q07560 283 aa1.62□□□□□ -2.15
VPS55YJR044C MCH4Q08268 501 aa1.62□□□□□ -2.15
VPS55YJR044C BSC6Q08280 497 aa1.62□□□□□ -2.15
VPS55YJR044C FRE3Q08905 711 aa1.62□□□□□ -2.15
VPS55YJR044C COX17Q12287 69 aa1.62□□□□□ -2.15
VPS55YJR044C ADE3P07245 946 aaKnown RBP1.61□□□□□ -2.15
VPS55YJR044C SEC53P07283 254 aaKnown RBP1.61□□□□□ -2.15
VPS55YJR044C FUM1P08417 488 aaKnown RBP1.61□□□□□ -2.15
VPS55YJR044C GPA1P08539 472 aa1.61□□□□□ -2.15
VPS55YJR044C CDC16P09798 840 aa1.61□□□□□ -2.15
VPS55YJR044C MTF2P10849 440 aa1.61□□□□□ -2.15
VPS55YJR044C RED1P14291 827 aa1.61□□□□□ -2.15
VPS55YJR044C SIR1P21691 654 aa1.61□□□□□ -2.15
VPS55YJR044C MGR1P25573 417 aa1.61□□□□□ -2.15
VPS55YJR044C SIP1P32578 815 aa1.61□□□□□ -2.15
VPS55YJR044C VMA8P32610 256 aaKnown RBP1.61□□□□□ -2.15
VPS55YJR044C NOP4P37838 685 aaKnown RBP1.61□□□□□ -2.15
VPS55YJR044C IFA38P38286 347 aa1.61□□□□□ -2.15
VPS55YJR044C LEU5P38702 357 aa1.61□□□□□ -2.15
VPS55YJR044C NOP16P40007 231 aaKnown RBP1.61□□□□□ -2.15
VPS55YJR044C YER010CP40011 234 aa1.61□□□□□ -2.15
VPS55YJR044C YJR061WP40355 935 aa1.61□□□□□ -2.15
VPS55YJR044C RSC1P53236 928 aa1.61□□□□□ -2.15
VPS55YJR044C YGR079WP53249 370 aa1.61□□□□□ -2.15
VPS55YJR044C ARC35P53731 342 aaKnown RBP1.61□□□□□ -2.15
VPS55YJR044C SMA1Q02651 245 aa1.61□□□□□ -2.15
VPS55YJR044C YPL108WQ02872 168 aaPredicted RBP1.61□□□□□ -2.15
VPS55YJR044C RCF1Q03713 159 aa1.61□□□□□ -2.15
VPS55YJR044C TRI1Q05024 226 aa1.61□□□□□ -2.15
VPS55YJR044C AIM6Q07716 390 aa1.61□□□□□ -2.15
VPS55YJR044C TRM8Q12009 286 aa1.61□□□□□ -2.15
VPS55YJR044C NUS1Q12063 375 aa1.61□□□□□ -2.15
VPS55YJR044C SFI1Q12369 946 aa1.61□□□□□ -2.15
VPS55YJR044C SNU66Q12420 587 aaPredicted RBP1.61□□□□□ -2.15
VPS55YJR044C ISA2Q12425 185 aa1.61□□□□□ -2.15
VPS55YJR044C ERG27Q12452 347 aaKnown RBP1.61□□□□□ -2.15
VPS55YJR044C SMC6Q12749 1114 aa1.61□□□□□ -2.15
VPS55YJR044C GCN4P03069 281 aa1.6□□□□□ -2.15
VPS55YJR044C CBP1P07252 654 aa1.6□□□□□ -2.15
VPS55YJR044C PET122P10355 254 aa1.6□□□□□ -2.15
VPS55YJR044C CDC24P11433 854 aaPredicted RBP1.6□□□□□ -2.15
VPS55YJR044C BAR1P12630 587 aa1.6□□□□□ -2.15
VPS55YJR044C NCP1P16603 691 aaKnown RBP1.6□□□□□ -2.15
VPS55YJR044C PDE1P22434 369 aa1.6□□□□□ -2.15
VPS55YJR044C SWI4P25302 1093 aaKnown RBP1.6□□□□□ -2.15
VPS55YJR044C CDC15P27636 974 aa1.6□□□□□ -2.15
VPS55YJR044C PRO3P32263 286 aaKnown RBP1.6□□□□□ -2.15
VPS55YJR044C VPH1P32563 840 aaKnown RBP1.6□□□□□ -2.15
VPS55YJR044C RAD24P32641 659 aa1.6□□□□□ -2.15
VPS55YJR044C BYE1P36106 594 aa1.6□□□□□ -2.15
VPS55YJR044C MUM2P38236 366 aa1.6□□□□□ -2.15
VPS55YJR044C FSH1P38777 243 aaKnown RBP1.6□□□□□ -2.15
VPS55YJR044C AXL2P38928 823 aa1.6□□□□□ -2.15
VPS55YJR044C YIL161WP40449 235 aaKnown RBP1.6□□□□□ -2.15
VPS55YJR044C GPD2P41911 440 aaKnown RBP1.6□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms