RNA–Protein interactions for RNA: YIL008W

URM1, Transcript of Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs, yeastyeast

Gene URM1, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
URM1YIL008W SMA1Q02651 245 aa2.41□□□□□ -2.02
URM1YIL008W FCP1Q03254 732 aa2.41□□□□□ -2.02
URM1YIL008W YTH1Q06102 208 aaPredicted RBP2.41□□□□□ -2.02
URM1YIL008W CDC15P27636 974 aa2.4□□□□□ -2.03
URM1YIL008W SEC1P30619 724 aaKnown RBP2.4□□□□□ -2.03
URM1YIL008W RAD16P31244 790 aa2.4□□□□□ -2.03
URM1YIL008W RPN2P32565 945 aaKnown RBP2.4□□□□□ -2.03
URM1YIL008W XRS2P33301 854 aa2.4□□□□□ -2.03
URM1YIL008W RFC1P38630 861 aaKnown RBP2.4□□□□□ -2.03
URM1YIL008W PFK26P40433 827 aaKnown RBP2.4□□□□□ -2.03
URM1YIL008W IAH1P41734 238 aa2.4□□□□□ -2.03
URM1YIL008W SMK1P41808 388 aa2.4□□□□□ -2.03
URM1YIL008W YFR020WP43600 232 aa2.4□□□□□ -2.03
URM1YIL008W CUL3P53202 744 aa2.4□□□□□ -2.03
URM1YIL008W YTP1P53584 459 aa2.4□□□□□ -2.03
URM1YIL008W IST1P53843 298 aaPredicted RBP2.4□□□□□ -2.03
URM1YIL008W EKI1Q03764 534 aa2.4□□□□□ -2.03
URM1YIL008W RSF1Q05043 376 aa2.4□□□□□ -2.03
URM1YIL008W TFC6Q06339 672 aa2.4□□□□□ -2.03
URM1YIL008W YLR352WQ06479 807 aa2.4□□□□□ -2.03
URM1YIL008W CSR1Q06705 408 aaKnown RBP2.4□□□□□ -2.03
URM1YIL008W EDE1P34216 1381 aa2.39□□□□□ -2.03
URM1YIL008W BAR1P12630 587 aa2.39□□□□□ -2.03
URM1YIL008W PFK2P16862 959 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
URM1YIL008W DBF20P32328 564 aa2.39□□□□□ -2.03
URM1YIL008W ESL2P36168 1195 aa2.39□□□□□ -2.03
URM1YIL008W STV1P37296 890 aa2.39□□□□□ -2.03
URM1YIL008W YJL070CP40361 888 aa2.39□□□□□ -2.03
URM1YIL008W RTS2P40962 232 aa2.39□□□□□ -2.03
URM1YIL008W CTF18P49956 741 aa2.39□□□□□ -2.03
URM1YIL008W YMR230W-AQ3E7B5 62 aa2.39□□□□□ -2.03
URM1YIL008W VCX1Q99385 411 aa2.39□□□□□ -2.03
URM1YIL008W HXK2P04807 486 aaKnown RBP2.38□□□□□ -2.03
URM1YIL008W ERG8P24521 451 aa2.38□□□□□ -2.03
URM1YIL008W GAC1P28006 793 aa2.38□□□□□ -2.03
URM1YIL008W TRS65P32893 560 aa2.38□□□□□ -2.03
URM1YIL008W PTH2P34222 208 aa2.38□□□□□ -2.03
URM1YIL008W TEF4P36008 412 aaKnown RBP2.38□□□□□ -2.03
URM1YIL008W MIA40P36046 403 aa2.38□□□□□ -2.03
URM1YIL008W YIL060WP40519 144 aa2.38□□□□□ -2.03
URM1YIL008W PKP1P40530 394 aa2.38□□□□□ -2.03
URM1YIL008W YIR014WP40570 242 aa2.38□□□□□ -2.03
URM1YIL008W SMC3P47037 1230 aa2.38□□□□□ -2.03
URM1YIL008W VPS4P52917 437 aa2.38□□□□□ -2.03
URM1YIL008W NNF2P53253 936 aa2.38□□□□□ -2.03
URM1YIL008W YMR178WQ03219 274 aaKnown RBP2.38□□□□□ -2.03
URM1YIL008W YDR415CQ04033 374 aaPredicted RBP2.38□□□□□ -2.03
URM1YIL008W SCW10Q04951 389 aa2.38□□□□□ -2.03
URM1YIL008W YDL218WQ07629 317 aa2.38□□□□□ -2.03
URM1YIL008W BSC1Q12140 328 aa2.38□□□□□ -2.03
URM1YIL008W YOR019WQ99248 730 aa2.38□□□□□ -2.03
URM1YIL008W YML002WP0CF17 737 aa2.37□□□□□ -2.03
URM1YIL008W GID7P25569 745 aa2.37□□□□□ -2.03
URM1YIL008W RIM2P38127 377 aa2.37□□□□□ -2.03
URM1YIL008W UME6P39001 836 aa2.37□□□□□ -2.03
URM1YIL008W PHO90P39535 881 aa2.37□□□□□ -2.03
URM1YIL008W RGI2P40188 164 aa2.37□□□□□ -2.03
URM1YIL008W IME4P41833 600 aa2.37□□□□□ -2.03
URM1YIL008W FET5P43561 622 aa2.37□□□□□ -2.03
URM1YIL008W YNR061CP53747 219 aa2.37□□□□□ -2.03
URM1YIL008W GIS2P53849 153 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
URM1YIL008W CRZ1P53968 678 aa2.37□□□□□ -2.03
URM1YIL008W REG1Q00816 1014 aa2.37□□□□□ -2.03
URM1YIL008W RTT103Q05543 409 aa2.37□□□□□ -2.03
URM1YIL008W NUS1Q12063 375 aa2.37□□□□□ -2.03
URM1YIL008W TIP41Q12199 356 aa2.37□□□□□ -2.03
URM1YIL008W YLR302CO13544 120 aa2.36□□□□□ -2.03
URM1YIL008W PMS1P14242 873 aa2.36□□□□□ -2.03
URM1YIL008W ERG7P38604 731 aa2.36□□□□□ -2.03
URM1YIL008W PSD1P39006 500 aa2.36□□□□□ -2.03
URM1YIL008W RIC1P40395 1056 aa2.36□□□□□ -2.03
URM1YIL008W DPB11P47027 764 aaPredicted RBP2.36□□□□□ -2.03
URM1YIL008W RRT6P53117 311 aaPredicted RBP2.36□□□□□ -2.03
URM1YIL008W NUP100Q02629 959 aa2.36□□□□□ -2.03
URM1YIL008W ATG26Q06321 1198 aa2.36□□□□□ -2.03
URM1YIL008W PSK2Q08217 1101 aa2.36□□□□□ -2.03
URM1YIL008W TRM8Q12009 286 aa2.36□□□□□ -2.03
URM1YIL008W APL4Q12028 832 aa2.36□□□□□ -2.03
URM1YIL008W ATG9Q12142 997 aa2.36□□□□□ -2.03
URM1YIL008W YBR085C-AO43137 85 aa2.35□□□□□ -2.03
URM1YIL008W SNF1P06782 633 aaKnown RBP2.35□□□□□ -2.03
URM1YIL008W GLN3P18494 730 aa2.35□□□□□ -2.03
URM1YIL008W SPE2P21182 396 aa2.35□□□□□ -2.03
URM1YIL008W CNS1P33313 385 aa2.35□□□□□ -2.03
URM1YIL008W YKL050CP35736 922 aa2.35□□□□□ -2.03
URM1YIL008W ARP1P38696 384 aa2.35□□□□□ -2.03
URM1YIL008W UIP3P39547 235 aa2.35□□□□□ -2.03
URM1YIL008W SEC24P40482 926 aaKnown RBP2.35□□□□□ -2.03
URM1YIL008W SAP185P40856 1058 aa2.35□□□□□ -2.03
URM1YIL008W AZF1P41696 914 aa2.35□□□□□ -2.03
URM1YIL008W BNA1P47096 177 aa2.35□□□□□ -2.03
URM1YIL008W MUB1Q03162 620 aa2.35□□□□□ -2.03
URM1YIL008W YOL159CQ08300 171 aa2.35□□□□□ -2.03
URM1YIL008W DAP1Q12091 152 aa2.35□□□□□ -2.03
URM1YIL008W CSR2Q12734 1121 aa2.35□□□□□ -2.03
URM1YIL008W SSM4P40318 1319 aa2.35□□□□□ -2.03
URM1YIL008W RPB2P08518 1224 aaKnown RBP2.34□□□□□ -2.03
URM1YIL008W LCB1P25045 558 aaKnown RBP2.34□□□□□ -2.03
URM1YIL008W SNU114P36048 1008 aaKnown RBP2.34□□□□□ -2.03
URM1YIL008W MIC60P36112 540 aa2.34□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms