RNA–Protein interactions for RNA: YDL078C

MDH3, Transcript of Peroxisomal malate dehydrogenase, yeastyeast

Gene MDH3, Length 1,032 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH3YDL078C PUF4P25339 888 aaKnown RBP RIP-Chip data5.79□□□□□ -1.48not detected
MDH3YDL078C ITR2P30606 609 aa5.79□□□□□ -1.48
MDH3YDL078C PDB1P32473 366 aaKnown RBP5.79□□□□□ -1.48
MDH3YDL078C TFB1P32776 642 aa5.79□□□□□ -1.48
MDH3YDL078C SRX1P36077 127 aa5.79□□□□□ -1.48
MDH3YDL078C ECM2P38241 364 aaKnown RBP5.79□□□□□ -1.48
MDH3YDL078C YBR242WP38331 238 aa5.79□□□□□ -1.48
MDH3YDL078C MSR1P38714 643 aa5.79□□□□□ -1.48
MDH3YDL078C CKB2P38930 258 aa5.79□□□□□ -1.48
MDH3YDL078C END3P39013 349 aa5.79□□□□□ -1.48
MDH3YDL078C ELO3P40319 345 aa5.79□□□□□ -1.48
MDH3YDL078C IST3P40565 148 aaPredicted RBP5.79□□□□□ -1.48
MDH3YDL078C PXA1P41909 870 aa5.79□□□□□ -1.48
MDH3YDL078C SIP4P46954 829 aa5.79□□□□□ -1.48
MDH3YDL078C GLG2P47011 380 aa5.79□□□□□ -1.48
MDH3YDL078C NPY1P53164 384 aa5.79□□□□□ -1.48
MDH3YDL078C AQR1P53943 586 aa5.79□□□□□ -1.48
MDH3YDL078C BOP3P53958 396 aa5.79□□□□□ -1.48
MDH3YDL078C CDC14Q00684 551 aa5.79□□□□□ -1.48
MDH3YDL078C MTG1Q03151 367 aaPredicted RBP5.79□□□□□ -1.48
MDH3YDL078C YMR178WQ03219 274 aaKnown RBP5.79□□□□□ -1.48
MDH3YDL078C MSH6Q03834 1242 aa5.79□□□□□ -1.48
MDH3YDL078C LDB18Q07887 179 aa5.79□□□□□ -1.48
MDH3YDL078C OPI10Q08202 246 aa5.79□□□□□ -1.48
MDH3YDL078C ZRT2Q12436 422 aa5.79□□□□□ -1.48
MDH3YDL078C OCA6Q12454 224 aa5.79□□□□□ -1.48
MDH3YDL078C NOT5Q12514 560 aaPredicted RBP5.79□□□□□ -1.48
MDH3YDL078C AI5_ALPHAQ9ZZX1 630 aa5.79□□□□□ -1.48
MDH3YDL078C IRA2P19158 3079 aa5.79□□□□□ -1.48
MDH3YDL078C YPR089WO13585 888 aa5.78□□□□□ -1.48
MDH3YDL078C COX5AP00424 153 aa5.78□□□□□ -1.48
MDH3YDL078C PMA2P19657 947 aa5.78□□□□□ -1.48
MDH3YDL078C RML2P32611 393 aa5.78□□□□□ -1.48
MDH3YDL078C YAT2P40017 923 aa5.78□□□□□ -1.48
MDH3YDL078C YMR134WP40207 237 aa5.78□□□□□ -1.48
MDH3YDL078C PAN6P40459 309 aa5.78□□□□□ -1.48
MDH3YDL078C GVP36P40531 326 aaKnown RBP5.78□□□□□ -1.48
MDH3YDL078C RGD2P43556 714 aa5.78□□□□□ -1.48
MDH3YDL078C TRS85P46944 698 aa5.78□□□□□ -1.48
MDH3YDL078C BUD13P46947 266 aaPredicted RBP5.78□□□□□ -1.48
MDH3YDL078C ALY2P47029 1046 aa5.78□□□□□ -1.48
MDH3YDL078C RPC17P47076 161 aa5.78□□□□□ -1.48
MDH3YDL078C RBL2P48606 106 aaKnown RBP5.78□□□□□ -1.48
MDH3YDL078C COQ5P49017 307 aa5.78□□□□□ -1.48
MDH3YDL078C ROM1P53046 1155 aa5.78□□□□□ -1.48
MDH3YDL078C MNT2P53059 558 aa5.78□□□□□ -1.48
MDH3YDL078C EMC4P53073 190 aa5.78□□□□□ -1.48
MDH3YDL078C COG7P53195 279 aa5.78□□□□□ -1.48
MDH3YDL078C YKR005CQ02203 525 aa5.78□□□□□ -1.48
MDH3YDL078C RSC4Q02206 625 aa5.78□□□□□ -1.48
MDH3YDL078C RLI1Q03195 608 aaKnown RBP5.78□□□□□ -1.48
MDH3YDL078C YMR187CQ03236 431 aa5.78□□□□□ -1.48
MDH3YDL078C PPN1Q04119 674 aa5.78□□□□□ -1.48
MDH3YDL078C ARP9Q05123 467 aa5.78□□□□□ -1.48
MDH3YDL078C ISR1Q06098 443 aaKnown RBP5.78□□□□□ -1.48
MDH3YDL078C AVO1Q08236 1176 aa5.78□□□□□ -1.48
MDH3YDL078C RKM1Q08961 583 aaPredicted RBP5.78□□□□□ -1.48
MDH3YDL078C SAM4Q08985 325 aaKnown RBP5.78□□□□□ -1.48
MDH3YDL078C AIM41Q12032 185 aa5.78□□□□□ -1.48
MDH3YDL078C WHI5Q12416 295 aa5.78□□□□□ -1.48
MDH3YDL078C LEU1P07264 779 aaKnown RBP5.77□□□□□ -1.49
MDH3YDL078C RPL40AP0CH08 128 aaKnown RBP5.77□□□□□ -1.49
MDH3YDL078C RPL40BP0CH09 128 aaKnown RBP5.77□□□□□ -1.49
MDH3YDL078C KIP2P28743 706 aa5.77□□□□□ -1.49
MDH3YDL078C RIB7P33312 244 aa5.77□□□□□ -1.49
MDH3YDL078C PMT1P33775 817 aa5.77□□□□□ -1.49
MDH3YDL078C YKL151CP36059 337 aa5.77□□□□□ -1.49
MDH3YDL078C ALY1P36117 915 aa5.77□□□□□ -1.49
MDH3YDL078C TFA2P36145 328 aa5.77□□□□□ -1.49
MDH3YDL078C MMS21P38632 267 aa5.77□□□□□ -1.49
MDH3YDL078C MKT1P40850 830 aaKnown RBP5.77□□□□□ -1.49
MDH3YDL078C MET12P46151 657 aa5.77□□□□□ -1.49
MDH3YDL078C IML2P47031 731 aa5.77□□□□□ -1.49
MDH3YDL078C STR3P53101 465 aaKnown RBP5.77□□□□□ -1.49
MDH3YDL078C SPC105P53148 917 aa5.77□□□□□ -1.49
MDH3YDL078C REG1Q00816 1014 aa5.77□□□□□ -1.49
MDH3YDL078C CIK1Q01649 594 aa5.77□□□□□ -1.49
MDH3YDL078C MET14Q02196 202 aa5.77□□□□□ -1.49
MDH3YDL078C ECM11Q04110 302 aa5.77□□□□□ -1.49
MDH3YDL078C RRN11Q04712 507 aa5.77□□□□□ -1.49
MDH3YDL078C ECI1Q05871 280 aa5.77□□□□□ -1.49
MDH3YDL078C NNT1Q05874 261 aa5.77□□□□□ -1.49
MDH3YDL078C SYO1Q07395 620 aa5.77□□□□□ -1.49
MDH3YDL078C AVL9Q12500 764 aa5.77□□□□□ -1.49
MDH3YDL078C YBL113CQ7M4S9 792 aa5.77□□□□□ -1.49
MDH3YDL078C TSC13Q99190 310 aa5.77□□□□□ -1.49
MDH3YDL078C YOR338WQ99326 363 aa5.77□□□□□ -1.49
MDH3YDL078C COX3P00420 269 aa5.76□□□□□ -1.49
MDH3YDL078C YML002WP0CF17 737 aa5.76□□□□□ -1.49
MDH3YDL078C SPT15P13393 240 aaKnown RBP5.76□□□□□ -1.49
MDH3YDL078C POL30P15873 258 aaKnown RBP5.76□□□□□ -1.49
MDH3YDL078C FES1P38260 290 aa5.76□□□□□ -1.49
MDH3YDL078C REI1P38344 393 aaPredicted RBP5.76□□□□□ -1.49
MDH3YDL078C LRP1P38801 184 aaKnown RBP5.76□□□□□ -1.49
MDH3YDL078C ARI1P53111 347 aaKnown RBP5.76□□□□□ -1.49
MDH3YDL078C PCL10P53124 433 aa5.76□□□□□ -1.49
MDH3YDL078C TIM13P53299 105 aa5.76□□□□□ -1.49
MDH3YDL078C YPR003CP53394 754 aa5.76□□□□□ -1.49
MDH3YDL078C ELA1P53861 379 aaPredicted RBP5.76□□□□□ -1.49
MDH3YDL078C TEP1P53916 434 aa5.76□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms