RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 TAF1DQ9H5J8 278 aaPredicted RBP8.46□□□□□ -1.05
CLIP1-205ENST00000514271 DBNDD1Q9H9R9 158 aa8.46□□□□□ -1.05
CLIP1-205ENST00000514271 ANO10Q9NW15 660 aa8.46□□□□□ -1.05
CLIP1-205ENST00000514271 TMOD2Q9NZR1 351 aa8.46□□□□□ -1.05
CLIP1-205ENST00000514271 CFAP45Q9UL16 551 aa8.46□□□□□ -1.05
CLIP1-205ENST00000514271 PPME1Q9Y570 386 aa8.46□□□□□ -1.05
CLIP1-205ENST00000514271 TACC3Q9Y6A5 838 aa8.46□□□□□ -1.05
CLIP1-205ENST00000514271 GAKO14976 1311 aa8.46□□□□□ -1.06
CLIP1-205ENST00000514271 ECM2O94769 699 aaPredicted RBP8.46□□□□□ -1.06
CLIP1-205ENST00000514271 TOMM70O94826 608 aa8.46□□□□□ -1.06
CLIP1-205ENST00000514271 LDHBP07195 334 aaKnown RBP8.46□□□□□ -1.06
CLIP1-205ENST00000514271 GMPSP49915 693 aaPredicted RBP8.46□□□□□ -1.06
CLIP1-205ENST00000514271 FKBP1BP68106 108 aa8.46□□□□□ -1.06
CLIP1-205ENST00000514271 CUL4BQ13620 913 aa8.46□□□□□ -1.06
CLIP1-205ENST00000514271 CCAR1Q8IX12 1150 aaKnown RBP8.46□□□□□ -1.06
CLIP1-205ENST00000514271 TXLNBQ8N3L3 684 aa8.46□□□□□ -1.06
CLIP1-205ENST00000514271 TEKT1Q969V4 418 aa8.46□□□□□ -1.06
CLIP1-205ENST00000514271 NEUROD6Q96NK8 337 aa8.46□□□□□ -1.06
CLIP1-205ENST00000514271 MYO1CO00159 1063 aa8.45□□□□□ -1.06
CLIP1-205ENST00000514271 FNTAP49354 379 aa8.45□□□□□ -1.06
CLIP1-205ENST00000514271 MAP3K12Q12852 859 aa8.45□□□□□ -1.06
CLIP1-205ENST00000514271 CHAF1AQ13111 956 aaPredicted RBP8.45□□□□□ -1.06
CLIP1-205ENST00000514271 MORC3Q14149 939 aa8.45□□□□□ -1.06
CLIP1-205ENST00000514271 RETREG2Q8NC44 543 aa8.45□□□□□ -1.06
CLIP1-205ENST00000514271 KLHDC4Q8TBB5 520 aa8.45□□□□□ -1.06
CLIP1-205ENST00000514271 ZDHHC15Q96MV8 337 aa8.45□□□□□ -1.06
CLIP1-205ENST00000514271 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.45□□□□□ -1.06
CLIP1-205ENST00000514271 HELLSQ9NRZ9 838 aa8.45□□□□□ -1.06
CLIP1-205ENST00000514271 PAPPA2Q9BXP8 1791 aa8.45□□□□□ -1.06
CLIP1-205ENST00000514271 TPD52L2O43399 206 aaKnown RBP8.45□□□□□ -1.06
CLIP1-205ENST00000514271 STX10O60499 249 aa8.45□□□□□ -1.06
CLIP1-205ENST00000514271 BAG3O95817 575 aa8.45□□□□□ -1.06
CLIP1-205ENST00000514271 GTF2IP78347 998 aa8.45□□□□□ -1.06
CLIP1-205ENST00000514271 MFSD14BQ5SR56 506 aa8.45□□□□□ -1.06
CLIP1-205ENST00000514271 CHADLQ6NUI6 762 aa8.45□□□□□ -1.06
CLIP1-205ENST00000514271 LRRC31Q6UY01 552 aa8.45□□□□□ -1.06
CLIP1-205ENST00000514271 HELBQ8NG08 1087 aaPredicted RBP8.45□□□□□ -1.06
CLIP1-205ENST00000514271 PANX2Q96RD6 677 aa8.45□□□□□ -1.06
CLIP1-205ENST00000514271 GINM1Q9NU53 330 aa8.45□□□□□ -1.06
CLIP1-205ENST00000514271 CNOT7Q9UIV1 285 aaKnown RBP8.45□□□□□ -1.06
CLIP1-205ENST00000514271 ADAM21Q9UKJ8 722 aa8.45□□□□□ -1.06
CLIP1-205ENST00000514271 CLIC4Q9Y696 253 aa8.45□□□□□ -1.06
CLIP1-205ENST00000514271 A0A087WWV3 80 aa8.45□□□□□ -1.06
CLIP1-205ENST00000514271 TRIM6-TRIM34B2RNG4 842 aa8.45□□□□□ -1.06
CLIP1-205ENST00000514271 ZBTB48P10074 688 aaPredicted RBP8.45□□□□□ -1.06
CLIP1-205ENST00000514271 GYG1P46976 350 aa8.45□□□□□ -1.06
CLIP1-205ENST00000514271 SCNN1DP51172 638 aa8.45□□□□□ -1.06
CLIP1-205ENST00000514271 KIF23Q02241 960 aaPredicted RBP8.45□□□□□ -1.06
CLIP1-205ENST00000514271 SLC39A14Q15043 492 aa8.45□□□□□ -1.06
CLIP1-205ENST00000514271 TPD52L1Q16890 204 aaPredicted RBP8.45□□□□□ -1.06
CLIP1-205ENST00000514271 DOK7Q18PE1 504 aa8.45□□□□□ -1.06
CLIP1-205ENST00000514271 Q6ZUG5 572 aa8.45□□□□□ -1.06
CLIP1-205ENST00000514271 FAM83AQ86UY5 434 aa8.45□□□□□ -1.06
CLIP1-205ENST00000514271 NME8Q8N427 588 aa8.45□□□□□ -1.06
CLIP1-205ENST00000514271 PARD6BQ9BYG5 372 aa8.45□□□□□ -1.06
CLIP1-205ENST00000514271 MRPL44Q9H9J2 332 aaKnown RBP8.45□□□□□ -1.06
CLIP1-205ENST00000514271 STK36Q9NRP7 1315 aa8.45□□□□□ -1.06
CLIP1-205ENST00000514271 CUTAO60888 179 aa8.44□□□□□ -1.06
CLIP1-205ENST00000514271 ATP1A3P13637 1013 aa8.44□□□□□ -1.06
CLIP1-205ENST00000514271 TXLNAP40222 546 aa8.44□□□□□ -1.06
CLIP1-205ENST00000514271 PPP4CP60510 307 aa8.44□□□□□ -1.06
CLIP1-205ENST00000514271 BRD3Q15059 726 aa8.44□□□□□ -1.06
CLIP1-205ENST00000514271 KIF4BQ2VIQ3 1234 aa8.44□□□□□ -1.06
CLIP1-205ENST00000514271 OLFM4Q6UX06 510 aa8.44□□□□□ -1.06
CLIP1-205ENST00000514271 DHX32Q7L7V1 743 aaKnown RBP8.44□□□□□ -1.06
CLIP1-205ENST00000514271 ANKRD13AQ8IZ07 590 aa8.44□□□□□ -1.06
CLIP1-205ENST00000514271 AOPEPQ8N6M6 819 aa8.44□□□□□ -1.06
CLIP1-205ENST00000514271 TRIM5Q9C035 493 aa8.44□□□□□ -1.06
CLIP1-205ENST00000514271 SEC31AO94979 1220 aaKnown RBP8.44□□□□□ -1.06
CLIP1-205ENST00000514271 PHKA1P46020 1223 aa8.44□□□□□ -1.06
CLIP1-205ENST00000514271 IRX3P78415 501 aaPredicted RBP8.44□□□□□ -1.06
CLIP1-205ENST00000514271 DLGAP5Q15398 846 aa8.44□□□□□ -1.06
CLIP1-205ENST00000514271 ISM2Q6H9L7 571 aa8.44□□□□□ -1.06
CLIP1-205ENST00000514271 KCNV1Q6PIU1 500 aa8.44□□□□□ -1.06
CLIP1-205ENST00000514271 NEK1Q96PY6 1258 aa8.44□□□□□ -1.06
CLIP1-205ENST00000514271 SEC62Q99442 399 aaKnown RBP8.44□□□□□ -1.06
CLIP1-205ENST00000514271 MYOZ2Q9NPC6 264 aa8.44□□□□□ -1.06
CLIP1-205ENST00000514271 TFIP11Q9UBB9 837 aaKnown RBP8.44□□□□□ -1.06
CLIP1-205ENST00000514271 PPP2R2CQ9Y2T4 447 aa8.44□□□□□ -1.06
CLIP1-205ENST00000514271 REXO2Q9Y3B8 237 aaKnown RBP8.44□□□□□ -1.06
CLIP1-205ENST00000514271 GJA3Q9Y6H8 435 aa8.44□□□□□ -1.06
CLIP1-205ENST00000514271 TMEM232C9JQI7 657 aa8.44□□□□□ -1.06
CLIP1-205ENST00000514271 BCAMP50895 628 aa8.44□□□□□ -1.06
CLIP1-205ENST00000514271 APOBRQ0VD83 1088 aa8.44□□□□□ -1.06
CLIP1-205ENST00000514271 FOXR1Q6PIV2 292 aa8.44□□□□□ -1.06
CLIP1-205ENST00000514271 BLOC1S2Q6QNY1 142 aa8.44□□□□□ -1.06
CLIP1-205ENST00000514271 TOGARAM2Q6ZUX3 1019 aa8.44□□□□□ -1.06
CLIP1-205ENST00000514271 MICALL2Q8IY33 904 aa8.44□□□□□ -1.06
CLIP1-205ENST00000514271 HHIPL1Q96JK4 782 aa8.44□□□□□ -1.06
CLIP1-205ENST00000514271 DBNDD2Q9BQY9 259 aa8.44□□□□□ -1.06
CLIP1-205ENST00000514271 MYH4Q9Y623 1939 aa8.44□□□□□ -1.06
CLIP1-205ENST00000514271 A0A0U1RQJ8 604 aa8.43□□□□□ -1.06
CLIP1-205ENST00000514271 PTPDC1A2A3K4 754 aa8.43□□□□□ -1.06
CLIP1-205ENST00000514271 ENTPD3O75355 529 aa8.43□□□□□ -1.06
CLIP1-205ENST00000514271 RAD17O75943 681 aa8.43□□□□□ -1.06
CLIP1-205ENST00000514271 TPM1P09493 284 aa8.43□□□□□ -1.06
CLIP1-205ENST00000514271 GUCY2CP25092 1073 aa8.43□□□□□ -1.06
CLIP1-205ENST00000514271 ACTN2P35609 894 aa8.43□□□□□ -1.06
CLIP1-205ENST00000514271 RASGRF1Q13972 1273 aa8.43□□□□□ -1.06
CLIP1-205ENST00000514271 UBE3CQ15386 1083 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms