RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C ARA2Q04212 335 aa7.45□□□□□ -1.22
RUP1YOR138C KRE28Q04431 385 aa7.45□□□□□ -1.22
RUP1YOR138C ECM38Q05902 660 aaPredicted RBP7.45□□□□□ -1.22
RUP1YOR138C SYT1Q06836 1226 aa7.45□□□□□ -1.22
RUP1YOR138C SLF1Q12034 447 aaKnown RBP7.45□□□□□ -1.22
RUP1YOR138C UBX3Q12229 455 aa7.45□□□□□ -1.22
RUP1YOR138C MDY2Q12285 212 aa7.45□□□□□ -1.22
RUP1YOR138C ABF1P14164 731 aa7.45□□□□□ -1.22
RUP1YOR138C NSP1P14907 823 aaKnown RBP7.45□□□□□ -1.22
RUP1YOR138C VPS3P23643 1011 aa7.45□□□□□ -1.22
RUP1YOR138C CSM1P25651 190 aa7.45□□□□□ -1.22
RUP1YOR138C MSS51P32335 436 aa7.45□□□□□ -1.22
RUP1YOR138C RPT1P33299 467 aaKnown RBP7.45□□□□□ -1.22
RUP1YOR138C YBR053CP38235 358 aa7.45□□□□□ -1.22
RUP1YOR138C FSH1P38777 243 aaKnown RBP7.45□□□□□ -1.22
RUP1YOR138C PRM9P39551 298 aa7.45□□□□□ -1.22
RUP1YOR138C ARB1P40024 610 aaKnown RBP7.45□□□□□ -1.22
RUP1YOR138C SLX8P40072 274 aa7.45□□□□□ -1.22
RUP1YOR138C SEC28P40509 296 aaKnown RBP7.45□□□□□ -1.22
RUP1YOR138C IRR1P40541 1150 aa7.45□□□□□ -1.22
RUP1YOR138C STB1P42845 420 aa7.45□□□□□ -1.22
RUP1YOR138C ROK1P45818 564 aaPredicted RBP7.45□□□□□ -1.22
RUP1YOR138C RRT6P53117 311 aaPredicted RBP7.45□□□□□ -1.22
RUP1YOR138C RMI1Q02685 241 aa7.45□□□□□ -1.22
RUP1YOR138C TRS31Q03337 283 aa7.45□□□□□ -1.22
RUP1YOR138C YDR239CQ03780 787 aa7.45□□□□□ -1.22
RUP1YOR138C RRP15Q06511 250 aaPredicted RBP7.45□□□□□ -1.22
RUP1YOR138C HUA2Q12134 243 aa7.45□□□□□ -1.22
RUP1YOR138C NSL1Q12143 216 aa7.45□□□□□ -1.22
RUP1YOR138C YPL247CQ12523 523 aa7.45□□□□□ -1.22
RUP1YOR138C RHO1P06780 209 aaKnown RBP7.44□□□□□ -1.22
RUP1YOR138C BCY1P07278 416 aaKnown RBP7.44□□□□□ -1.22
RUP1YOR138C GLN4P13188 809 aaKnown RBP7.44□□□□□ -1.22
RUP1YOR138C YCR090CP25654 182 aaKnown RBP7.44□□□□□ -1.22
RUP1YOR138C BRF1P29056 596 aa7.44□□□□□ -1.22
RUP1YOR138C SSE2P32590 693 aaKnown RBP7.44□□□□□ -1.22
RUP1YOR138C UTP11P34247 250 aaPredicted RBP7.44□□□□□ -1.22
RUP1YOR138C CYC2P38909 366 aa7.44□□□□□ -1.22
RUP1YOR138C PCF11P39081 626 aaPredicted RBP7.44□□□□□ -1.22
RUP1YOR138C FAA2P39518 744 aa7.44□□□□□ -1.22
RUP1YOR138C RMR1P53060 241 aa7.44□□□□□ -1.22
RUP1YOR138C JIP4Q03361 876 aa7.44□□□□□ -1.22
RUP1YOR138C MSC2Q03455 724 aa7.44□□□□□ -1.22
RUP1YOR138C RPN9Q04062 393 aaKnown RBP7.44□□□□□ -1.22
RUP1YOR138C YDL073WQ07454 984 aa7.44□□□□□ -1.22
RUP1YOR138C ARP7Q12406 477 aa7.44□□□□□ -1.22
RUP1YOR138C ATP6P00854 259 aa7.44□□□□□ -1.22
RUP1YOR138C TPO5P36029 618 aa7.44□□□□□ -1.22
RUP1YOR138C SHE3P38272 425 aaKnown RBP7.44□□□□□ -1.22
RUP1YOR138C SSZ1P38788 538 aaKnown RBP7.44□□□□□ -1.22
RUP1YOR138C YRB2P40517 327 aa7.44□□□□□ -1.22
RUP1YOR138C CDC1P40986 491 aa7.44□□□□□ -1.22
RUP1YOR138C ELP2P42935 788 aa7.44□□□□□ -1.22
RUP1YOR138C ALT2P52892 507 aa7.44□□□□□ -1.22
RUP1YOR138C MON1P53129 644 aa7.44□□□□□ -1.22
RUP1YOR138C YGR053CP53234 283 aa7.44□□□□□ -1.22
RUP1YOR138C SLM2P53955 656 aa7.44□□□□□ -1.22
RUP1YOR138C TAF12Q03761 539 aa7.44□□□□□ -1.22
RUP1YOR138C SPG3Q04398 127 aaPredicted RBP7.44□□□□□ -1.22
RUP1YOR138C REH1Q06709 432 aa7.44□□□□□ -1.22
RUP1YOR138C DTD1Q07648 150 aaKnown RBP7.44□□□□□ -1.22
RUP1YOR138C RSB1Q08417 382 aa7.44□□□□□ -1.22
RUP1YOR138C BRR1Q99177 341 aaPredicted RBP7.44□□□□□ -1.22
RUP1YOR138C SAC1P32368 623 aaKnown RBP7.43□□□□□ -1.22
RUP1YOR138C RGT1P32862 1170 aa7.43□□□□□ -1.22
RUP1YOR138C GRS1P38088 690 aaKnown RBP7.43□□□□□ -1.22
RUP1YOR138C YBR285WP38354 144 aa7.43□□□□□ -1.22
RUP1YOR138C YJR154WP47181 346 aa7.43□□□□□ -1.22
RUP1YOR138C ISM1P48526 1002 aa7.43□□□□□ -1.22
RUP1YOR138C SIW14P53965 281 aa7.43□□□□□ -1.22
RUP1YOR138C CEG1Q01159 459 aaPredicted RBP7.43□□□□□ -1.22
RUP1YOR138C ORM2Q06144 216 aa7.43□□□□□ -1.22
RUP1YOR138C SWC7Q06707 132 aa7.43□□□□□ -1.22
RUP1YOR138C YOL159CQ08300 171 aa7.43□□□□□ -1.22
RUP1YOR138C CIT2P08679 460 aa7.42□□□□□ -1.22
RUP1YOR138C FBA1P14540 359 aaKnown RBP7.42□□□□□ -1.22
RUP1YOR138C YSP3P25036 478 aa7.42□□□□□ -1.22
RUP1YOR138C YIH1P25637 258 aa7.42□□□□□ -1.22
RUP1YOR138C SRP101P32916 621 aa7.42□□□□□ -1.22
RUP1YOR138C TYE7P33122 291 aaPredicted RBP7.42□□□□□ -1.22
RUP1YOR138C MRP21P38175 177 aa7.42□□□□□ -1.22
RUP1YOR138C IST2P38250 946 aa7.42□□□□□ -1.22
RUP1YOR138C YJR061WP40355 935 aa7.42□□□□□ -1.22
RUP1YOR138C VHR1P40522 640 aa7.42□□□□□ -1.22
RUP1YOR138C YGR054WP53235 642 aaKnown RBP7.42□□□□□ -1.22
RUP1YOR138C HXT15P54854 567 aa7.42□□□□□ -1.22
RUP1YOR138C ADE12P80210 433 aaKnown RBP7.42□□□□□ -1.22
RUP1YOR138C ENT5Q03769 411 aaKnown RBP7.42□□□□□ -1.22
RUP1YOR138C DNL4Q08387 944 aaPredicted RBP7.42□□□□□ -1.22
RUP1YOR138C NBP2Q12163 236 aa7.42□□□□□ -1.22
RUP1YOR138C ATG34Q12292 412 aa7.42□□□□□ -1.22
RUP1YOR138C COX5AP00424 153 aa7.42□□□□□ -1.22
RUP1YOR138C HIS1P00498 297 aaKnown RBP7.42□□□□□ -1.22
RUP1YOR138C RPB4P20433 221 aaPredicted RBP7.42□□□□□ -1.22
RUP1YOR138C CTR86P25355 563 aa7.42□□□□□ -1.22
RUP1YOR138C RAD27P26793 382 aa7.42□□□□□ -1.22
RUP1YOR138C ITR2P30606 609 aa7.42□□□□□ -1.22
RUP1YOR138C CYS4P32582 507 aaKnown RBP7.42□□□□□ -1.22
RUP1YOR138C CSE1P33307 960 aa7.42□□□□□ -1.22
RUP1YOR138C YHB1P39676 399 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms