RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C GLO4Q12320 285 aa3.52□□□□□ -1.85
SHH3YMR118C LDB17Q12342 491 aa3.52□□□□□ -1.85
SHH3YMR118C GPR1Q12361 961 aa3.52□□□□□ -1.85
SHH3YMR118C GIS3Q12418 502 aa3.52□□□□□ -1.85
SHH3YMR118C HSH49Q99181 213 aaPredicted RBP3.52□□□□□ -1.85
SHH3YMR118C RGS2Q99188 309 aa3.52□□□□□ -1.85
SHH3YMR118C YLR278CQ05854 1341 aa3.51□□□□□ -1.85
SHH3YMR118C STE2D6VTK4 431 aa3.51□□□□□ -1.85
SHH3YMR118C CAR1P00812 333 aaKnown RBP3.51□□□□□ -1.85
SHH3YMR118C TUB2P02557 457 aaKnown RBP3.51□□□□□ -1.85
SHH3YMR118C PMA1P05030 918 aaKnown RBP3.51□□□□□ -1.85
SHH3YMR118C HEM1P09950 548 aaPredicted RBP3.51□□□□□ -1.85
SHH3YMR118C HVG1P0CE11 249 aa3.51□□□□□ -1.85
SHH3YMR118C SNF4P12904 322 aa3.51□□□□□ -1.85
SHH3YMR118C KSS1P14681 368 aa3.51□□□□□ -1.85
SHH3YMR118C THR1P17423 357 aaKnown RBP3.51□□□□□ -1.85
SHH3YMR118C FAR1P21268 830 aa3.51□□□□□ -1.85
SHH3YMR118C RPB10P22139 70 aa3.51□□□□□ -1.85
SHH3YMR118C UBA1P22515 1024 aaKnown RBP3.51□□□□□ -1.85
SHH3YMR118C BRF1P29056 596 aa3.51□□□□□ -1.85
SHH3YMR118C PTP2P29461 750 aa3.51□□□□□ -1.85
SHH3YMR118C SEC1P30619 724 aaKnown RBP3.51□□□□□ -1.85
SHH3YMR118C HEM12P32347 362 aaPredicted RBP3.51□□□□□ -1.85
SHH3YMR118C PHA2P32452 334 aa3.51□□□□□ -1.85
SHH3YMR118C COT1P32798 439 aa3.51□□□□□ -1.85
SHH3YMR118C UGP1P32861 499 aaKnown RBP3.51□□□□□ -1.85
SHH3YMR118C PTH2P34222 208 aa3.51□□□□□ -1.85
SHH3YMR118C KDX1P36005 433 aa3.51□□□□□ -1.85
SHH3YMR118C RCN1P36054 211 aa3.51□□□□□ -1.85
SHH3YMR118C IRS4P36115 615 aaKnown RBP3.51□□□□□ -1.85
SHH3YMR118C GPT2P36148 743 aa3.51□□□□□ -1.85
SHH3YMR118C KAP104P38217 918 aaKnown RBP3.51□□□□□ -1.85
SHH3YMR118C YBR285WP38354 144 aa3.51□□□□□ -1.85
SHH3YMR118C VMA22P38784 181 aa3.51□□□□□ -1.85
SHH3YMR118C PET100P38958 111 aa3.51□□□□□ -1.85
SHH3YMR118C SEC31P38968 1273 aaKnown RBP3.51□□□□□ -1.85
SHH3YMR118C SHC1P39000 512 aa3.51□□□□□ -1.85
SHH3YMR118C IRC5P43610 853 aa3.51□□□□□ -1.85
SHH3YMR118C ASN1P49089 572 aaKnown RBP3.51□□□□□ -1.85
SHH3YMR118C LSG1P53145 640 aaKnown RBP3.51□□□□□ -1.85
SHH3YMR118C YGL039WP53183 348 aaKnown RBP3.51□□□□□ -1.85
SHH3YMR118C GET1P53192 235 aa3.51□□□□□ -1.85
SHH3YMR118C CUS2P53830 285 aaPredicted RBP3.51□□□□□ -1.85
SHH3YMR118C ORC3P54790 616 aa3.51□□□□□ -1.85
SHH3YMR118C CDC55Q00362 526 aa3.51□□□□□ -1.85
SHH3YMR118C SED5Q01590 340 aa3.51□□□□□ -1.85
SHH3YMR118C RNY1Q02933 434 aaKnown RBP3.51□□□□□ -1.85
SHH3YMR118C TRS130Q03660 1102 aa3.51□□□□□ -1.85
SHH3YMR118C GPI17Q04080 534 aa3.51□□□□□ -1.85
SHH3YMR118C ERB1Q04660 807 aaKnown RBP3.51□□□□□ -1.85
SHH3YMR118C DYN3Q04949 312 aa3.51□□□□□ -1.85
SHH3YMR118C FAR10Q06001 478 aa3.51□□□□□ -1.85
SHH3YMR118C YCS4Q06156 1176 aa3.51□□□□□ -1.85
SHH3YMR118C UIP4Q08926 304 aa3.51□□□□□ -1.85
SHH3YMR118C RKM1Q08961 583 aaPredicted RBP3.51□□□□□ -1.85
SHH3YMR118C APC9Q12107 265 aa3.51□□□□□ -1.85
SHH3YMR118C YLR125WQ12138 136 aa3.51□□□□□ -1.85
SHH3YMR118C YLL056CQ12177 298 aa3.51□□□□□ -1.85
SHH3YMR118C YOR342CQ12182 319 aa3.51□□□□□ -1.85
SHH3YMR118C YLL054CQ12244 843 aa3.51□□□□□ -1.85
SHH3YMR118C HER1Q12276 1246 aa3.51□□□□□ -1.85
SHH3YMR118C PSY3Q12318 242 aa3.51□□□□□ -1.85
SHH3YMR118C SCM3Q12334 223 aa3.51□□□□□ -1.85
SHH3YMR118C NOP56Q12460 504 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
SHH3YMR118C RHO2P06781 192 aa3.5□□□□□ -1.85
SHH3YMR118C GCY1P14065 312 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
SHH3YMR118C FBA1P14540 359 aaKnown RBP3.5□□□□□ -1.85
SHH3YMR118C HSC82P15108 705 aaKnown RBP3.5□□□□□ -1.85
SHH3YMR118C POL30P15873 258 aaKnown RBP3.5□□□□□ -1.85
SHH3YMR118C GAS1P22146 559 aaKnown RBP3.5□□□□□ -1.85
SHH3YMR118C CAD1P24813 409 aaKnown RBP3.5□□□□□ -1.85
SHH3YMR118C CLB3P24870 427 aa3.5□□□□□ -1.85
SHH3YMR118C SPB1P25582 841 aaPredicted RBP3.5□□□□□ -1.85
SHH3YMR118C MSH2P25847 964 aa3.5□□□□□ -1.85
SHH3YMR118C ATP7P30902 174 aa3.5□□□□□ -1.85
SHH3YMR118C RIM1P32445 135 aaKnown RBP3.5□□□□□ -1.85
SHH3YMR118C AEP1P32493 518 aa3.5□□□□□ -1.85
SHH3YMR118C NGG1P32494 702 aa3.5□□□□□ -1.85
SHH3YMR118C CSE1P33307 960 aa3.5□□□□□ -1.85
SHH3YMR118C DOM34P33309 386 aa3.5□□□□□ -1.85
SHH3YMR118C HSP78P33416 811 aa3.5□□□□□ -1.85
SHH3YMR118C PET112P33893 541 aa3.5□□□□□ -1.85
SHH3YMR118C RDH54P38086 958 aa3.5□□□□□ -1.85
SHH3YMR118C APN2P38207 520 aa3.5□□□□□ -1.85
SHH3YMR118C QNS1P38795 714 aaKnown RBP3.5□□□□□ -1.85
SHH3YMR118C CRP1P38845 465 aaKnown RBP3.5□□□□□ -1.85
SHH3YMR118C PIK1P39104 1066 aa3.5□□□□□ -1.85
SHH3YMR118C YIL054WP40524 105 aa3.5□□□□□ -1.85
SHH3YMR118C MSS2P40990 351 aa3.5□□□□□ -1.85
SHH3YMR118C MRK1P50873 501 aa3.5□□□□□ -1.85
SHH3YMR118C NOP19P53317 196 aaPredicted RBP3.5□□□□□ -1.85
SHH3YMR118C RTT102P53330 157 aa3.5□□□□□ -1.85
SHH3YMR118C ARC35P53731 342 aaKnown RBP3.5□□□□□ -1.85
SHH3YMR118C ESF2P53743 316 aaKnown RBP3.5□□□□□ -1.85
SHH3YMR118C GPD1Q00055 391 aaKnown RBP3.5□□□□□ -1.85
SHH3YMR118C ROD1Q02805 837 aa3.5□□□□□ -1.85
SHH3YMR118C CLU1Q03690 1277 aaKnown RBP3.5□□□□□ -1.85
SHH3YMR118C GMC2Q06201 188 aa3.5□□□□□ -1.85
SHH3YMR118C JIP5Q06214 492 aaPredicted RBP3.5□□□□□ -1.85
SHH3YMR118C GGA1Q06336 557 aa3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 44 ms