RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C YMR254CQ04838 102 aa3.67□□□□□ -1.82
ATG38YLR211C FMP42Q04991 504 aa3.67□□□□□ -1.82
ATG38YLR211C CIA1Q05583 330 aa3.67□□□□□ -1.82
ATG38YLR211C GPN2Q08726 347 aaPredicted RBP3.67□□□□□ -1.82
ATG38YLR211C SWT1Q12104 458 aa3.67□□□□□ -1.82
ATG38YLR211C PCD1Q12524 340 aa3.67□□□□□ -1.82
ATG38YLR211C PHO2P07269 559 aa3.66□□□□□ -1.82
ATG38YLR211C PPZ1P26570 692 aa3.66□□□□□ -1.82
ATG38YLR211C GRX7P38068 203 aa3.66□□□□□ -1.82
ATG38YLR211C SWP82P43554 623 aa3.66□□□□□ -1.82
ATG38YLR211C IML2P47031 731 aa3.66□□□□□ -1.82
ATG38YLR211C PFA5Q03289 374 aa3.66□□□□□ -1.82
ATG38YLR211C YLR049CQ12110 428 aa3.66□□□□□ -1.82
ATG38YLR211C HNM1P19807 563 aa3.65□□□□□ -1.83
ATG38YLR211C RTT107P38850 1070 aa3.65□□□□□ -1.83
ATG38YLR211C VRG4P40107 337 aa3.65□□□□□ -1.83
ATG38YLR211C PSP1P50896 841 aaKnown RBP3.65□□□□□ -1.83
ATG38YLR211C DCP2P53550 970 aaKnown RBP3.65□□□□□ -1.83
ATG38YLR211C CSL4P53859 292 aaPredicted RBP3.65□□□□□ -1.83
ATG38YLR211C SMA1Q02651 245 aa3.65□□□□□ -1.83
ATG38YLR211C RRP6Q12149 733 aaKnown RBP3.65□□□□□ -1.83
ATG38YLR211C ATP2P00830 511 aaKnown RBP3.64□□□□□ -1.83
ATG38YLR211C ATP4P05626 244 aa3.64□□□□□ -1.83
ATG38YLR211C APA1P16550 321 aaKnown RBP3.64□□□□□ -1.83
ATG38YLR211C TKL1P23254 680 aaKnown RBP3.64□□□□□ -1.83
ATG38YLR211C MGR1P25573 417 aa3.64□□□□□ -1.83
ATG38YLR211C NTR2P36118 322 aaPredicted RBP3.64□□□□□ -1.83
ATG38YLR211C FMP46P36141 133 aaKnown RBP3.64□□□□□ -1.83
ATG38YLR211C RKM3P38222 552 aa3.64□□□□□ -1.83
ATG38YLR211C VPS27P40343 622 aaKnown RBP3.64□□□□□ -1.83
ATG38YLR211C SAD1P43589 448 aa3.64□□□□□ -1.83
ATG38YLR211C TAN1P53072 289 aaPredicted RBP3.64□□□□□ -1.83
ATG38YLR211C ARC35P53731 342 aaKnown RBP3.64□□□□□ -1.83
ATG38YLR211C YLR281CQ05863 155 aa3.64□□□□□ -1.83
ATG38YLR211C UTP21Q06078 939 aaPredicted RBP3.64□□□□□ -1.83
ATG38YLR211C CRN1Q06440 651 aa3.64□□□□□ -1.83
ATG38YLR211C YIL161WP40449 235 aaKnown RBP3.63□□□□□ -1.83
ATG38YLR211C SGF73P53165 657 aa3.63□□□□□ -1.83
ATG38YLR211C YTP1P53584 459 aa3.63□□□□□ -1.83
ATG38YLR211C PDR3P33200 976 aa3.62□□□□□ -1.83
ATG38YLR211C AAP1P37898 856 aaKnown RBP3.62□□□□□ -1.83
ATG38YLR211C CTK2P46962 323 aa3.62□□□□□ -1.83
ATG38YLR211C YNR061CP53747 219 aa3.62□□□□□ -1.83
ATG38YLR211C YNL181WP53878 407 aa3.62□□□□□ -1.83
ATG38YLR211C EKI1Q03764 534 aa3.62□□□□□ -1.83
ATG38YLR211C TFC6Q06339 672 aa3.62□□□□□ -1.83
ATG38YLR211C COX17Q12287 69 aa3.62□□□□□ -1.83
ATG38YLR211C TY2A-LR1P0C2J4 438 aa3.61□□□□□ -1.83
ATG38YLR211C TY2A-FP0CX61 438 aa3.61□□□□□ -1.83
ATG38YLR211C TY2A-GR2P0CX62 438 aa3.61□□□□□ -1.83
ATG38YLR211C BAR1P12630 587 aa3.61□□□□□ -1.83
ATG38YLR211C SPO16P17122 198 aa3.61□□□□□ -1.83
ATG38YLR211C CLB2P24869 491 aa3.61□□□□□ -1.83
ATG38YLR211C TY2A-CP25383 438 aa3.61□□□□□ -1.83
ATG38YLR211C YCL049CP25577 312 aa3.61□□□□□ -1.83
ATG38YLR211C YPK3P38070 525 aa3.61□□□□□ -1.83
ATG38YLR211C ACA1P39970 489 aa3.61□□□□□ -1.83
ATG38YLR211C TY2A-DR2Q03483 438 aa3.61□□□□□ -1.83
ATG38YLR211C MCP2Q06567 569 aa3.61□□□□□ -1.83
ATG38YLR211C YOL159CQ08300 171 aa3.61□□□□□ -1.83
ATG38YLR211C TMA16Q08687 178 aa3.61□□□□□ -1.83
ATG38YLR211C TY2A-BQ12260 438 aa3.61□□□□□ -1.83
ATG38YLR211C TY2A-OR2Q12293 438 aa3.61□□□□□ -1.83
ATG38YLR211C TY2A-DR1Q12392 438 aa3.61□□□□□ -1.83
ATG38YLR211C TY2A-OR1Q12439 438 aa3.61□□□□□ -1.83
ATG38YLR211C TY2A-DR3Q99303 438 aa3.61□□□□□ -1.83
ATG38YLR211C LHS1P36016 881 aa3.6□□□□□ -1.83
ATG38YLR211C IFA38P38286 347 aa3.6□□□□□ -1.83
ATG38YLR211C BZZ1P38822 633 aa3.6□□□□□ -1.83
ATG38YLR211C SEC31P38968 1273 aaKnown RBP3.6□□□□□ -1.83
ATG38YLR211C ECM10P39987 644 aa3.6□□□□□ -1.83
ATG38YLR211C YFR020WP43600 232 aa3.6□□□□□ -1.83
ATG38YLR211C CUL3P53202 744 aa3.6□□□□□ -1.83
ATG38YLR211C RSM28Q03430 361 aa3.6□□□□□ -1.83
ATG38YLR211C ARP10Q04549 284 aa3.6□□□□□ -1.83
ATG38YLR211C RTT103Q05543 409 aa3.6□□□□□ -1.83
ATG38YLR211C BSC1Q12140 328 aa3.6□□□□□ -1.83
ATG38YLR211C TAH18Q12181 623 aa3.6□□□□□ -1.83
ATG38YLR211C EDE1P34216 1381 aa3.6□□□□□ -1.83
ATG38YLR211C YEF3P16521 1044 aaKnown RBP3.59□□□□□ -1.83
ATG38YLR211C SAC1P32368 623 aaKnown RBP3.59□□□□□ -1.83
ATG38YLR211C SRB5P32585 307 aa3.59□□□□□ -1.83
ATG38YLR211C RAD24P32641 659 aa3.59□□□□□ -1.83
ATG38YLR211C RFC1P38630 861 aaKnown RBP3.59□□□□□ -1.83
ATG38YLR211C ARP1P38696 384 aa3.59□□□□□ -1.83
ATG38YLR211C MRX1P40050 688 aa3.59□□□□□ -1.83
ATG38YLR211C RTS2P40962 232 aa3.59□□□□□ -1.83
ATG38YLR211C FET5P43561 622 aa3.59□□□□□ -1.83
ATG38YLR211C ATG27P46989 271 aa3.59□□□□□ -1.83
ATG38YLR211C COG1P53079 417 aa3.59□□□□□ -1.83
ATG38YLR211C RRT6P53117 311 aaPredicted RBP3.59□□□□□ -1.83
ATG38YLR211C NYV1Q12255 253 aa3.59□□□□□ -1.83
ATG38YLR211C MTF2P10849 440 aa3.58□□□□□ -1.84
ATG38YLR211C RAP1P11938 827 aa3.58□□□□□ -1.84
ATG38YLR211C MSM1P22438 575 aa3.58□□□□□ -1.84
ATG38YLR211C SOF1P33750 489 aaKnown RBP3.58□□□□□ -1.84
ATG38YLR211C NUP120P35729 1037 aa3.58□□□□□ -1.84
ATG38YLR211C NPR3P38742 1146 aa3.58□□□□□ -1.84
ATG38YLR211C PSF2P40359 213 aa3.58□□□□□ -1.84
ATG38YLR211C RPN11P43588 306 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms