RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C TDA10P42938 290 aa4.46□□□□□ -1.7
USB1YLR132C YNL092WP53934 400 aa4.46□□□□□ -1.7
USB1YLR132C RAD33Q04231 177 aa4.46□□□□□ -1.7
USB1YLR132C VID22Q05934 901 aa4.46□□□□□ -1.7
USB1YLR132C IRC3Q06683 689 aa4.46□□□□□ -1.7
USB1YLR132C VAM6Q07468 1049 aa4.46□□□□□ -1.7
USB1YLR132C PCL8Q08966 492 aa4.46□□□□□ -1.7
USB1YLR132C NEW1Q08972 1196 aaKnown RBP4.46□□□□□ -1.7
USB1YLR132C NBP2Q12163 236 aa4.46□□□□□ -1.7
USB1YLR132C RGT2Q12300 763 aa4.46□□□□□ -1.7
USB1YLR132C ENT1Q12518 454 aa4.46□□□□□ -1.7
USB1YLR132C NUP192P47054 1683 aa4.45□□□□□ -1.7
USB1YLR132C YLR302CO13544 120 aa4.45□□□□□ -1.7
USB1YLR132C SNF1P06782 633 aaKnown RBP4.45□□□□□ -1.7
USB1YLR132C LRE1P25579 583 aaKnown RBP4.45□□□□□ -1.7
USB1YLR132C CDC15P27636 974 aa4.45□□□□□ -1.7
USB1YLR132C VBA2P38358 474 aaKnown RBP4.45□□□□□ -1.7
USB1YLR132C NAB3P38996 802 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
USB1YLR132C SAP1P39955 897 aaKnown RBP4.45□□□□□ -1.7
USB1YLR132C TAM41P53230 385 aa4.45□□□□□ -1.7
USB1YLR132C YGR079WP53249 370 aa4.45□□□□□ -1.7
USB1YLR132C YDR109CQ04585 715 aa4.45□□□□□ -1.7
USB1YLR132C ORM2Q06144 216 aa4.45□□□□□ -1.7
USB1YLR132C YOR389WQ08912 624 aa4.45□□□□□ -1.7
USB1YLR132C NUS1Q12063 375 aa4.45□□□□□ -1.7
USB1YLR132C BAG7Q12128 409 aa4.45□□□□□ -1.7
USB1YLR132C NKP1Q12493 238 aa4.45□□□□□ -1.7
USB1YLR132C COX1P00401 534 aa4.44□□□□□ -1.7
USB1YLR132C TY2A-LR1P0C2J4 438 aa4.44□□□□□ -1.7
USB1YLR132C TY2A-FP0CX61 438 aa4.44□□□□□ -1.7
USB1YLR132C TY2A-GR2P0CX62 438 aa4.44□□□□□ -1.7
USB1YLR132C TY2A-CP25383 438 aa4.44□□□□□ -1.7
USB1YLR132C LAC1P28496 418 aa4.44□□□□□ -1.7
USB1YLR132C TFC3P34111 1160 aa4.44□□□□□ -1.7
USB1YLR132C YER010CP40011 234 aa4.44□□□□□ -1.7
USB1YLR132C VID27P40157 782 aa4.44□□□□□ -1.7
USB1YLR132C NPA3P47122 385 aa4.44□□□□□ -1.7
USB1YLR132C DCP2P53550 970 aaKnown RBP4.44□□□□□ -1.7
USB1YLR132C CSL4P53859 292 aaPredicted RBP4.44□□□□□ -1.7
USB1YLR132C YAT1P80235 687 aa4.44□□□□□ -1.7
USB1YLR132C TY2A-DR2Q03483 438 aa4.44□□□□□ -1.7
USB1YLR132C IMH1Q06704 911 aaKnown RBP4.44□□□□□ -1.7
USB1YLR132C TY2A-BQ12260 438 aa4.44□□□□□ -1.7
USB1YLR132C TY2A-OR2Q12293 438 aa4.44□□□□□ -1.7
USB1YLR132C TY2A-DR1Q12392 438 aa4.44□□□□□ -1.7
USB1YLR132C TY2A-OR1Q12439 438 aa4.44□□□□□ -1.7
USB1YLR132C TY2A-DR3Q99303 438 aa4.44□□□□□ -1.7
USB1YLR132C SEC3P33332 1336 aaKnown RBP4.44□□□□□ -1.7
USB1YLR132C HES1P35843 434 aa4.43□□□□□ -1.7
USB1YLR132C ERC1P38767 581 aa4.43□□□□□ -1.7
USB1YLR132C VPS8P39702 1274 aa4.43□□□□□ -1.7
USB1YLR132C ULP2P40537 1034 aaPredicted RBP4.43□□□□□ -1.7
USB1YLR132C PSP1P50896 841 aaKnown RBP4.43□□□□□ -1.7
USB1YLR132C CBK1P53894 756 aa4.43□□□□□ -1.7
USB1YLR132C VPS72Q03388 795 aa4.43□□□□□ -1.7
USB1YLR132C YDL121CQ07541 149 aa4.43□□□□□ -1.7
USB1YLR132C TMA16Q08687 178 aa4.43□□□□□ -1.7
USB1YLR132C TRM8Q12009 286 aa4.43□□□□□ -1.7
USB1YLR132C FRE7Q12333 620 aa4.43□□□□□ -1.7
USB1YLR132C AQY1P0CD91 305 aa4.42□□□□□ -1.7
USB1YLR132C RRP43P25359 394 aaPredicted RBP4.42□□□□□ -1.7
USB1YLR132C GFD2P25370 566 aaKnown RBP4.42□□□□□ -1.7
USB1YLR132C PTC6P25646 442 aa4.42□□□□□ -1.7
USB1YLR132C KES1P35844 434 aaKnown RBP4.42□□□□□ -1.7
USB1YLR132C BUD16P39988 312 aa4.42□□□□□ -1.7
USB1YLR132C ASG1P40467 964 aa4.42□□□□□ -1.7
USB1YLR132C HRD3Q05787 833 aa4.42□□□□□ -1.7
USB1YLR132C CYK3Q07533 885 aa4.42□□□□□ -1.7
USB1YLR132C RDL1Q12305 139 aaKnown RBP4.42□□□□□ -1.7
USB1YLR132C GSY2P27472 705 aa4.41□□□□□ -1.7
USB1YLR132C YJU2P28320 278 aaPredicted RBP4.41□□□□□ -1.7
USB1YLR132C CHS3P29465 1165 aa4.41□□□□□ -1.7
USB1YLR132C PFK26P40433 827 aaKnown RBP4.41□□□□□ -1.7
USB1YLR132C UBP7P40453 1071 aa4.41□□□□□ -1.7
USB1YLR132C YRB30P53107 440 aaPredicted RBP4.41□□□□□ -1.7
USB1YLR132C STP1Q00947 519 aa4.41□□□□□ -1.7
USB1YLR132C YPL071CQ02864 156 aa4.41□□□□□ -1.7
USB1YLR132C FCP1Q03254 732 aa4.41□□□□□ -1.7
USB1YLR132C STP3Q05937 343 aa4.41□□□□□ -1.7
USB1YLR132C URB1P34241 1764 aaKnown RBP4.4□□□□□ -1.7
USB1YLR132C SES1P07284 462 aaKnown RBP4.4□□□□□ -1.71
USB1YLR132C SUI3P09064 285 aaKnown RBP4.4□□□□□ -1.71
USB1YLR132C PRE8P23639 250 aa4.4□□□□□ -1.71
USB1YLR132C RFA2P26754 273 aaKnown RBP4.4□□□□□ -1.71
USB1YLR132C MSS51P32335 436 aa4.4□□□□□ -1.71
USB1YLR132C MCM10P32354 571 aa4.4□□□□□ -1.71
USB1YLR132C TMA108P40462 946 aa4.4□□□□□ -1.71
USB1YLR132C PSA1P41940 361 aaKnown RBP4.4□□□□□ -1.71
USB1YLR132C BNA1P47096 177 aa4.4□□□□□ -1.71
USB1YLR132C ATP23P53722 227 aa4.4□□□□□ -1.71
USB1YLR132C MPS1P54199 764 aa4.4□□□□□ -1.71
USB1YLR132C TFC6Q06339 672 aa4.4□□□□□ -1.71
USB1YLR132C SPN1Q06505 410 aaPredicted RBP4.4□□□□□ -1.71
USB1YLR132C LEA1Q08963 238 aaPredicted RBP4.4□□□□□ -1.71
USB1YLR132C SKM1Q12469 655 aa4.4□□□□□ -1.71
USB1YLR132C PCD1Q12524 340 aa4.4□□□□□ -1.71
USB1YLR132C TY3B-IQ7LHG5 1498 aaKnown RBP4.39□□□□□ -1.71
USB1YLR132C FUM1P08417 488 aaKnown RBP4.39□□□□□ -1.71
USB1YLR132C ILS1P09436 1072 aaKnown RBP4.39□□□□□ -1.71
USB1YLR132C YML003WP0CF16 290 aa4.39□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms