RNA–Protein interactions for RNA: YFR004W

RPN11, Transcript of Metalloprotease subunit of 19S regulatory particle, yeastyeast

Gene RPN11, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN11YFR004W GCN5Q03330 439 aa6.12□□□□□ -1.43
RPN11YFR004W RKM2Q03942 479 aa6.12□□□□□ -1.43
RPN11YFR004W SXM1Q04175 944 aaKnown RBP6.12□□□□□ -1.43
RPN11YFR004W RTT10Q08924 1013 aa6.12□□□□□ -1.43
RPN11YFR004W TY4A-HQ6Q5P6 413 aa6.12□□□□□ -1.43
RPN11YFR004W CSF1Q12150 2958 aa6.11□□□□□ -1.43
RPN11YFR004W SAT4P25333 603 aaKnown RBP6.11□□□□□ -1.43
RPN11YFR004W SNT1P25357 1226 aa6.11□□□□□ -1.43
RPN11YFR004W GBP2P25555 427 aaKnown RBP RIP-Chip data6.11□□□□□ -1.43 RIP-Chip
RPN11YFR004W GAR1P28007 205 aaKnown RBP6.11□□□□□ -1.43
RPN11YFR004W MLF3P32047 452 aa6.11□□□□□ -1.43
RPN11YFR004W FRE1P32791 686 aa6.11□□□□□ -1.43
RPN11YFR004W STE5P32917 917 aa6.11□□□□□ -1.43
RPN11YFR004W SET3P36124 751 aa6.11□□□□□ -1.43
RPN11YFR004W NOP4P37838 685 aaKnown RBP6.11□□□□□ -1.43
RPN11YFR004W ATG12P38316 186 aa6.11□□□□□ -1.43
RPN11YFR004W YBR225WP38321 900 aa6.11□□□□□ -1.43
RPN11YFR004W REV7P38927 245 aa6.11□□□□□ -1.43
RPN11YFR004W CKB2P38930 258 aa6.11□□□□□ -1.43
RPN11YFR004W FHL1P39521 936 aa6.11□□□□□ -1.43
RPN11YFR004W RSP5P39940 809 aaKnown RBP6.11□□□□□ -1.43
RPN11YFR004W AVT2P39981 480 aa6.11□□□□□ -1.43
RPN11YFR004W AXL1P40851 1208 aa6.11□□□□□ -1.43
RPN11YFR004W ERG10P41338 398 aaKnown RBP6.11□□□□□ -1.43
RPN11YFR004W SAE2P46946 345 aa6.11□□□□□ -1.43
RPN11YFR004W TAH11P47112 604 aa6.11□□□□□ -1.43
RPN11YFR004W ERP6P53198 216 aa6.11□□□□□ -1.43
RPN11YFR004W UBP2Q01476 1272 aa6.11□□□□□ -1.43
RPN11YFR004W TOF2Q02208 771 aa6.11□□□□□ -1.43
RPN11YFR004W LGE1Q02796 332 aaKnown RBP6.11□□□□□ -1.43
RPN11YFR004W INA17Q02888 182 aa6.11□□□□□ -1.43
RPN11YFR004W MSH6Q03834 1242 aa6.11□□□□□ -1.43
RPN11YFR004W SND1Q04007 877 aa6.11□□□□□ -1.43
RPN11YFR004W GTB1Q04924 702 aa6.11□□□□□ -1.43
RPN11YFR004W ECM22Q05958 814 aaPredicted RBP6.11□□□□□ -1.43
RPN11YFR004W LCB5Q06147 687 aaKnown RBP6.11□□□□□ -1.43
RPN11YFR004W YSH1Q06224 779 aaPredicted RBP6.11□□□□□ -1.43
RPN11YFR004W PUT4P15380 627 aa6.1□□□□□ -1.43
RPN11YFR004W DAL1P32375 460 aa6.1□□□□□ -1.43
RPN11YFR004W DSS4P32601 143 aa6.1□□□□□ -1.43
RPN11YFR004W TFB1P32776 642 aa6.1□□□□□ -1.43
RPN11YFR004W YSC84P32793 468 aa6.1□□□□□ -1.43
RPN11YFR004W RRN3P36070 627 aa6.1□□□□□ -1.43
RPN11YFR004W UTH1P36135 365 aa6.1□□□□□ -1.43
RPN11YFR004W ABZ1P37254 787 aaPredicted RBP6.1□□□□□ -1.43
RPN11YFR004W YJL206CP39529 758 aa6.1□□□□□ -1.43
RPN11YFR004W OSW5P40219 148 aa6.1□□□□□ -1.43
RPN11YFR004W VTC4P47075 721 aa6.1□□□□□ -1.43
RPN11YFR004W YJR054WP47114 497 aa6.1□□□□□ -1.43
RPN11YFR004W PAN2P53010 1115 aaPredicted RBP6.1□□□□□ -1.43
RPN11YFR004W YGR283CP53336 341 aaPredicted RBP6.1□□□□□ -1.43
RPN11YFR004W YNR065CP53751 1116 aa6.1□□□□□ -1.43
RPN11YFR004W YPL014WQ02606 381 aa6.1□□□□□ -1.43
RPN11YFR004W ATP25Q03153 612 aa6.1□□□□□ -1.43
RPN11YFR004W MUB1Q03162 620 aa6.1□□□□□ -1.43
RPN11YFR004W MZM1Q03429 123 aaPredicted RBP6.1□□□□□ -1.43
RPN11YFR004W YMR160WQ03823 816 aa6.1□□□□□ -1.43
RPN11YFR004W MDM38Q08179 573 aa6.1□□□□□ -1.43
RPN11YFR004W VPS54Q12071 889 aa6.1□□□□□ -1.43
RPN11YFR004W IMA3P0CW40 589 aa6.09□□□□□ -1.43
RPN11YFR004W IMA4P0CW41 589 aa6.09□□□□□ -1.43
RPN11YFR004W ERR1P0CX10 437 aa6.09□□□□□ -1.43
RPN11YFR004W ERR2P0CX11 437 aa6.09□□□□□ -1.43
RPN11YFR004W HSF1P10961 833 aa6.09□□□□□ -1.43
RPN11YFR004W NPP1P25353 742 aa6.09□□□□□ -1.43
RPN11YFR004W KAP122P32767 1081 aa6.09□□□□□ -1.43
RPN11YFR004W YDR089WP38966 869 aa6.09□□□□□ -1.43
RPN11YFR004W GDH3P39708 457 aa6.09□□□□□ -1.43
RPN11YFR004W DSE1P40077 573 aa6.09□□□□□ -1.43
RPN11YFR004W SEC26P41810 973 aaKnown RBP6.09□□□□□ -1.43
RPN11YFR004W RTA1P53047 317 aa6.09□□□□□ -1.43
RPN11YFR004W PCL10P53124 433 aa6.09□□□□□ -1.43
RPN11YFR004W USE1P53146 245 aa6.09□□□□□ -1.43
RPN11YFR004W YNL247WP53852 767 aaKnown RBP6.09□□□□□ -1.43
RPN11YFR004W TDA7P53882 636 aaPredicted RBP6.09□□□□□ -1.43
RPN11YFR004W YAT1P80235 687 aa6.09□□□□□ -1.43
RPN11YFR004W RNY1Q02933 434 aaKnown RBP6.09□□□□□ -1.43
RPN11YFR004W DIS3Q08162 1001 aaKnown RBP6.09□□□□□ -1.43
RPN11YFR004W IMA2Q08295 589 aa6.09□□□□□ -1.43
RPN11YFR004W THI21Q08975 551 aa6.09□□□□□ -1.43
RPN11YFR004W YLR125WQ12138 136 aa6.09□□□□□ -1.43
RPN11YFR004W YLL056CQ12177 298 aa6.09□□□□□ -1.43
RPN11YFR004W SPE4Q12455 300 aa6.09□□□□□ -1.43
RPN11YFR004W AVL9Q12500 764 aa6.09□□□□□ -1.43
RPN11YFR004W SEC39Q12745 709 aa6.09□□□□□ -1.43
RPN11YFR004W VPS5Q92331 675 aa6.09□□□□□ -1.43
RPN11YFR004W RPL24AP04449 155 aaKnown RBP6.08□□□□□ -1.44
RPN11YFR004W LRE1P25579 583 aaKnown RBP6.08□□□□□ -1.44
RPN11YFR004W YMC2P38087 329 aa6.08□□□□□ -1.44
RPN11YFR004W HSL7P38274 827 aa6.08□□□□□ -1.44
RPN11YFR004W DIA4P38705 446 aaPredicted RBP6.08□□□□□ -1.44
RPN11YFR004W SSN3P39073 555 aa6.08□□□□□ -1.44
RPN11YFR004W PIK1P39104 1066 aa6.08□□□□□ -1.44
RPN11YFR004W HEM14P40012 539 aa6.08□□□□□ -1.44
RPN11YFR004W RIO2P40160 425 aaKnown RBP6.08□□□□□ -1.44
RPN11YFR004W YJL107CP42947 387 aa6.08□□□□□ -1.44
RPN11YFR004W YFL012WP43580 148 aa6.08□□□□□ -1.44
RPN11YFR004W FAR3P46671 204 aa6.08□□□□□ -1.44
RPN11YFR004W GUF1P46943 645 aa6.08□□□□□ -1.44
RPN11YFR004W NUP84P52891 726 aa6.08□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms