RNA–Protein interactions for RNA: YDL201W

TRM8, Transcript of Noncatalytic subunit of a tRNA methyltransferase complex, yeast

Gene TRM8, Length 861 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM8	YDL201W	ETP1	P38748	585 aa	Known RBP	4.91	□□□□□ -1.62
TRM8	YDL201W	CTM1	P38818	585 aa		4.91	□□□□□ -1.62
TRM8	YDL201W	REV7	P38927	245 aa		4.91	□□□□□ -1.62
TRM8	YDL201W	YDR089W	P38966	869 aa		4.91	□□□□□ -1.62
TRM8	YDL201W	OSW5	P40219	148 aa		4.91	□□□□□ -1.62
TRM8	YDL201W	NAS2	P40555	220 aa		4.91	□□□□□ -1.62
TRM8	YDL201W	LIA1	P47120	325 aa	Known RBP	4.91	□□□□□ -1.62
TRM8	YDL201W	AAD10	P47182	288 aa		4.91	□□□□□ -1.62
TRM8	YDL201W	YGR045C	P53229	120 aa		4.91	□□□□□ -1.62
TRM8	YDL201W	PEF1	P53238	335 aa		4.91	□□□□□ -1.62
TRM8	YDL201W	RRP46	P53256	223 aa	Predicted RBP	4.91	□□□□□ -1.62
TRM8	YDL201W	LSC1	P53598	329 aa	Known RBP	4.91	□□□□□ -1.62
TRM8	YDL201W	SQS1	P53866	767 aa	Known RBP	4.91	□□□□□ -1.62
TRM8	YDL201W	YLR456W	Q06199	204 aa		4.91	□□□□□ -1.62
TRM8	YDL201W	SKG3	Q06315	1026 aa		4.91	□□□□□ -1.62
TRM8	YDL201W	ARV1	Q06541	321 aa		4.91	□□□□□ -1.62
TRM8	YDL201W	BMS1	Q08965	1183 aa	Known RBP	4.91	□□□□□ -1.62
TRM8	YDL201W	PSY3	Q12318	242 aa		4.91	□□□□□ -1.62
TRM8	YDL201W	GPM3	Q12326	303 aa		4.91	□□□□□ -1.62
TRM8	YDL201W	ERG27	Q12452	347 aa	Known RBP	4.91	□□□□□ -1.62
TRM8	YDL201W	Q0142	Q9ZZW4	58 aa		4.91	□□□□□ -1.62
TRM8	YDL201W	RPO41	P13433	1351 aa	Known RBP	4.91	□□□□□ -1.62
TRM8	YDL201W	TY4B-H	P0C2J7	1802 aa		4.9	□□□□□ -1.62
TRM8	YDL201W	TY4B-J	P47024	1803 aa		4.9	□□□□□ -1.62
TRM8	YDL201W	PRP6	P19735	899 aa	Predicted RBP	4.9	□□□□□ -1.63
TRM8	YDL201W	PHO91	P27514	894 aa		4.9	□□□□□ -1.63
TRM8	YDL201W	URA7	P28274	579 aa	Known RBP	4.9	□□□□□ -1.63
TRM8	YDL201W	CAP1	P28495	268 aa	Known RBP	4.9	□□□□□ -1.63
TRM8	YDL201W	ARP2	P32381	391 aa	Known RBP	4.9	□□□□□ -1.63
TRM8	YDL201W	LTV1	P34078	463 aa		4.9	□□□□□ -1.63
TRM8	YDL201W	YUH1	P35127	236 aa		4.9	□□□□□ -1.63
TRM8	YDL201W	AKL1	P38080	1108 aa	Known RBP	4.9	□□□□□ -1.63
TRM8	YDL201W	PCH2	P38126	564 aa		4.9	□□□□□ -1.63
TRM8	YDL201W	APN2	P38207	520 aa		4.9	□□□□□ -1.63
TRM8	YDL201W	MIP6	P38760	659 aa	Known RBP	4.9	□□□□□ -1.63
TRM8	YDL201W	GPB2	P39717	880 aa		4.9	□□□□□ -1.63
TRM8	YDL201W	ARB1	P40024	610 aa	Known RBP	4.9	□□□□□ -1.63
TRM8	YDL201W	RTR1	P40084	226 aa	Predicted RBP	4.9	□□□□□ -1.63
TRM8	YDL201W	RGI2	P40188	164 aa		4.9	□□□□□ -1.63
TRM8	YDL201W	CEP3	P40969	608 aa		4.9	□□□□□ -1.63
TRM8	YDL201W	EPL1	P43572	832 aa		4.9	□□□□□ -1.63
TRM8	YDL201W	GLO1	P50107	326 aa		4.9	□□□□□ -1.63
TRM8	YDL201W	SHE4	P51534	789 aa		4.9	□□□□□ -1.63
TRM8	YDL201W	COG1	P53079	417 aa		4.9	□□□□□ -1.63
TRM8	YDL201W	BRE5	P53741	515 aa	Known RBP	4.9	□□□□□ -1.63
TRM8	YDL201W	YKR011C	Q02209	353 aa		4.9	□□□□□ -1.63
TRM8	YDL201W	RAD30	Q04049	632 aa		4.9	□□□□□ -1.63
TRM8	YDL201W	MCP2	Q06567	569 aa		4.9	□□□□□ -1.63
TRM8	YDL201W	CIR2	Q08822	631 aa		4.9	□□□□□ -1.63
TRM8	YDL201W	RPN5	Q12250	445 aa	Known RBP	4.9	□□□□□ -1.63
TRM8	YDL201W	PFK27	Q12471	397 aa	Predicted RBP	4.9	□□□□□ -1.63
TRM8	YDL201W	CTF3	Q12748	733 aa		4.9	□□□□□ -1.63
TRM8	YDL201W	YJR112W-A	Q3E743	109 aa		4.9	□□□□□ -1.63
TRM8	YDL201W	YOL159C-A	Q3E769	90 aa		4.9	□□□□□ -1.63
TRM8	YDL201W	YRF1-2	P40105	1681 aa		4.89	□□□□□ -1.63
TRM8	YDL201W	COQ4	O13525	335 aa		4.89	□□□□□ -1.63
TRM8	YDL201W	PUT4	P15380	627 aa		4.89	□□□□□ -1.63
TRM8	YDL201W	RPB4	P20433	221 aa	Predicted RBP	4.89	□□□□□ -1.63
TRM8	YDL201W	DBP3	P20447	523 aa	Known RBP	4.89	□□□□□ -1.63
TRM8	YDL201W	MRPL25	P23369	157 aa		4.89	□□□□□ -1.63
TRM8	YDL201W	YJU2	P28320	278 aa	Predicted RBP	4.89	□□□□□ -1.63
TRM8	YDL201W	EFB1	P32471	206 aa	Known RBP	4.89	□□□□□ -1.63
TRM8	YDL201W	GCD7	P32502	381 aa	Predicted RBP	4.89	□□□□□ -1.63
TRM8	YDL201W	MRP4	P32902	394 aa		4.89	□□□□□ -1.63
TRM8	YDL201W	HEL1	P36113	551 aa		4.89	□□□□□ -1.63
TRM8	YDL201W	CDS1	P38221	457 aa		4.89	□□□□□ -1.63
TRM8	YDL201W	TDP1	P38319	544 aa		4.89	□□□□□ -1.63
TRM8	YDL201W	YHR097C	P38809	366 aa	Known RBP	4.89	□□□□□ -1.63
TRM8	YDL201W	WSS1	P38838	269 aa		4.89	□□□□□ -1.63
TRM8	YDL201W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
TRM8	YDL201W	SEC9	P40357	651 aa		4.89	□□□□□ -1.63
TRM8	YDL201W	YIL089W	P40500	205 aa		4.89	□□□□□ -1.63
TRM8	YDL201W	PKP1	P40530	394 aa		4.89	□□□□□ -1.63
TRM8	YDL201W	MET28	P40573	187 aa		4.89	□□□□□ -1.63
TRM8	YDL201W	STU2	P46675	888 aa		4.89	□□□□□ -1.63
TRM8	YDL201W	NCS6	P53088	359 aa		4.89	□□□□□ -1.63
TRM8	YDL201W	MDR1	P53258	950 aa		4.89	□□□□□ -1.63
TRM8	YDL201W	CSL4	P53859	292 aa	Predicted RBP	4.89	□□□□□ -1.63
TRM8	YDL201W	PDR16	P53860	351 aa	Known RBP	4.89	□□□□□ -1.63
TRM8	YDL201W	HDA1	P53973	706 aa		4.89	□□□□□ -1.63
TRM8	YDL201W	DAK1	P54838	584 aa	Known RBP	4.89	□□□□□ -1.63
TRM8	YDL201W	PRO2	P54885	456 aa	Known RBP	4.89	□□□□□ -1.63
TRM8	YDL201W	ARP4	P80428	489 aa		4.89	□□□□□ -1.63
TRM8	YDL201W	TOF2	Q02208	771 aa		4.89	□□□□□ -1.63
TRM8	YDL201W	VPS64	Q03944	604 aa		4.89	□□□□□ -1.63
TRM8	YDL201W	SSL1	Q04673	461 aa	Predicted RBP	4.89	□□□□□ -1.63
TRM8	YDL201W	DON1	Q05610	365 aa		4.89	□□□□□ -1.63
TRM8	YDL201W	NOP6	Q07623	225 aa	Known RBP	4.89	□□□□□ -1.63
TRM8	YDL201W	ENT4	Q07872	247 aa		4.89	□□□□□ -1.63
TRM8	YDL201W	OSW2	Q12202	724 aa		4.89	□□□□□ -1.63
TRM8	YDL201W	YOR022C	Q12204	715 aa		4.89	□□□□□ -1.63
TRM8	YDL201W	NBL1	Q3E7Y6	73 aa		4.89	□□□□□ -1.63
TRM8	YDL201W	AFI1	Q99222	893 aa		4.89	□□□□□ -1.63
TRM8	YDL201W	YOR019W	Q99248	730 aa		4.89	□□□□□ -1.63
TRM8	YDL201W	SIR4	P11978	1358 aa		4.89	□□□□□ -1.63
TRM8	YDL201W	TY2A-LR1	P0C2J4	438 aa		4.88	□□□□□ -1.63
TRM8	YDL201W	RPS24A	P0CX31	135 aa	Known RBP	4.88	□□□□□ -1.63
TRM8	YDL201W	RPS24B	P0CX32	135 aa	Known RBP	4.88	□□□□□ -1.63
TRM8	YDL201W	TY2A-F	P0CX61	438 aa		4.88	□□□□□ -1.63
TRM8	YDL201W	TY2A-GR2	P0CX62	438 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 22 ms