RNA–Protein interactions for RNA: YDL076C

RXT3, Transcript of Component of the Rpd3L histone deacetylase complex, yeast

Gene RXT3, Length 885 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RXT3	YDL076C	UBX4	P54730	416 aa		4.59	□□□□□ -1.67
RXT3	YDL076C	SEG1	Q04279	960 aa		4.59	□□□□□ -1.67
RXT3	YDL076C	TMN2	Q04562	672 aa		4.59	□□□□□ -1.67
RXT3	YDL076C	CSR1	Q06705	408 aa	Known RBP	4.59	□□□□□ -1.67
RXT3	YDL076C	TPO1	Q07824	586 aa		4.59	□□□□□ -1.67
RXT3	YDL076C	TCO89	Q08921	799 aa		4.59	□□□□□ -1.67
RXT3	YDL076C	YPQ1	Q12010	308 aa		4.59	□□□□□ -1.67
RXT3	YDL076C	NBP2	Q12163	236 aa		4.59	□□□□□ -1.67
RXT3	YDL076C	GIS3	Q12418	502 aa		4.59	□□□□□ -1.67
RXT3	YDL076C	MSB2	P32334	1306 aa		4.58	□□□□□ -1.68
RXT3	YDL076C	CHS1	P08004	1131 aa		4.58	□□□□□ -1.68
RXT3	YDL076C	SED4	P25365	1065 aa		4.58	□□□□□ -1.68
RXT3	YDL076C	PTP2	P29461	750 aa		4.58	□□□□□ -1.68
RXT3	YDL076C	KTR4	P38131	464 aa		4.58	□□□□□ -1.68
RXT3	YDL076C	SAK1	P38990	1142 aa		4.58	□□□□□ -1.68
RXT3	YDL076C	PZF1	P39933	429 aa		4.58	□□□□□ -1.68
RXT3	YDL076C	AVT2	P39981	480 aa		4.58	□□□□□ -1.68
RXT3	YDL076C	OSW5	P40219	148 aa		4.58	□□□□□ -1.68
RXT3	YDL076C	GUF1	P46943	645 aa		4.58	□□□□□ -1.68
RXT3	YDL076C	ZAP1	P47043	880 aa		4.58	□□□□□ -1.68
RXT3	YDL076C	YJR039W	P47107	1121 aa		4.58	□□□□□ -1.68
RXT3	YDL076C	NUP84	P52891	726 aa		4.58	□□□□□ -1.68
RXT3	YDL076C	NMA2	P53204	395 aa		4.58	□□□□□ -1.68
RXT3	YDL076C	ORC3	P54790	616 aa		4.58	□□□□□ -1.68
RXT3	YDL076C	JIP3	O13555	125 aa		4.57	□□□□□ -1.68
RXT3	YDL076C	GAL1	P04385	528 aa		4.57	□□□□□ -1.68
RXT3	YDL076C	RNR1	P21524	888 aa	Known RBP	4.57	□□□□□ -1.68
RXT3	YDL076C	TRX2	P22803	104 aa	Known RBP	4.57	□□□□□ -1.68
RXT3	YDL076C	RRT12	P25381	491 aa		4.57	□□□□□ -1.68
RXT3	YDL076C	YBR056W	P38081	501 aa		4.57	□□□□□ -1.68
RXT3	YDL076C	AGP2	P38090	596 aa		4.57	□□□□□ -1.68
RXT3	YDL076C	YBR225W	P38321	900 aa		4.57	□□□□□ -1.68
RXT3	YDL076C	SSZ1	P38788	538 aa	Known RBP	4.57	□□□□□ -1.68
RXT3	YDL076C	DSE1	P40077	573 aa		4.57	□□□□□ -1.68
RXT3	YDL076C	LCB2	P40970	561 aa		4.57	□□□□□ -1.68
RXT3	YDL076C	UFE1	P41834	346 aa		4.57	□□□□□ -1.68
RXT3	YDL076C	DRN1	P53255	507 aa	Known RBP	4.57	□□□□□ -1.68
RXT3	YDL076C	SNO2	P53823	222 aa		4.57	□□□□□ -1.68
RXT3	YDL076C	ROT1	Q03691	256 aa		4.57	□□□□□ -1.68
RXT3	YDL076C	COG4	Q06096	861 aa		4.57	□□□□□ -1.68
RXT3	YDL076C	MLC2	Q06580	163 aa		4.57	□□□□□ -1.68
RXT3	YDL076C	BSP1	Q06604	576 aa		4.57	□□□□□ -1.68
RXT3	YDL076C	KIN3	P22209	435 aa		4.56	□□□□□ -1.68
RXT3	YDL076C	YMC2	P38087	329 aa		4.56	□□□□□ -1.68
RXT3	YDL076C	MIP6	P38760	659 aa	Known RBP	4.56	□□□□□ -1.68
RXT3	YDL076C	YJR079W	P47126	109 aa		4.56	□□□□□ -1.68
RXT3	YDL076C	MND1	P53102	219 aa		4.56	□□□□□ -1.68
RXT3	YDL076C	ARP4	P80428	489 aa		4.56	□□□□□ -1.68
RXT3	YDL076C	ECM38	Q05902	660 aa	Predicted RBP	4.56	□□□□□ -1.68
RXT3	YDL076C	YDL073W	Q07454	984 aa		4.56	□□□□□ -1.68
RXT3	YDL076C	ADY3	Q07732	790 aa		4.56	□□□□□ -1.68
RXT3	YDL076C	RPN8	Q08723	338 aa	Known RBP	4.56	□□□□□ -1.68
RXT3	YDL076C	DDC1	Q08949	612 aa		4.56	□□□□□ -1.68
RXT3	YDL076C	SEN1	Q00416	2231 aa	Known RBP	4.56	□□□□□ -1.68
RXT3	YDL076C	BEM2	P39960	2167 aa	Known RBP	4.55	□□□□□ -1.68
RXT3	YDL076C	NGG1	P32494	702 aa		4.55	□□□□□ -1.68
RXT3	YDL076C	DSS4	P32601	143 aa		4.55	□□□□□ -1.68
RXT3	YDL076C	TCD2	P36101	447 aa	Known RBP	4.55	□□□□□ -1.68
RXT3	YDL076C	FAT1	P38225	669 aa		4.55	□□□□□ -1.68
RXT3	YDL076C	TIF5	P38431	405 aa	Known RBP	4.55	□□□□□ -1.68
RXT3	YDL076C	YJR061W	P40355	935 aa		4.55	□□□□□ -1.68
RXT3	YDL076C	MET12	P46151	657 aa		4.55	□□□□□ -1.68
RXT3	YDL076C	CPR7	P47103	393 aa		4.55	□□□□□ -1.68
RXT3	YDL076C	HOP2	P53187	214 aa		4.55	□□□□□ -1.68
RXT3	YDL076C	RSC1	P53236	928 aa		4.55	□□□□□ -1.68
RXT3	YDL076C	HOL1	P53389	586 aa		4.55	□□□□□ -1.68
RXT3	YDL076C	YMR210W	Q03649	449 aa		4.55	□□□□□ -1.68
RXT3	YDL076C	GYL1	Q04322	720 aa		4.55	□□□□□ -1.68
RXT3	YDL076C	GFD1	Q04839	188 aa	Known RBP	4.55	□□□□□ -1.68
RXT3	YDL076C	ECM22	Q05958	814 aa	Predicted RBP	4.55	□□□□□ -1.68
RXT3	YDL076C	CLP1	Q08685	445 aa	Predicted RBP	4.55	□□□□□ -1.68
RXT3	YDL076C	YPL216W	Q08964	1102 aa		4.55	□□□□□ -1.68
RXT3	YDL076C	RRP6	Q12149	733 aa	Known RBP	4.55	□□□□□ -1.68
RXT3	YDL076C	UPC2	Q12151	913 aa		4.55	□□□□□ -1.68
RXT3	YDL076C	PYC1	P11154	1178 aa	Known RBP	4.54	□□□□□ -1.68
RXT3	YDL076C	FPR1	P20081	114 aa	Known RBP	4.54	□□□□□ -1.68
RXT3	YDL076C	IME1	P21190	360 aa		4.54	□□□□□ -1.68
RXT3	YDL076C	MRS6	P32864	603 aa	Known RBP	4.54	□□□□□ -1.68
RXT3	YDL076C	PTH2	P34222	208 aa		4.54	□□□□□ -1.68
RXT3	YDL076C	THI80	P35202	319 aa		4.54	□□□□□ -1.68
RXT3	YDL076C	ECM13	P38195	257 aa		4.54	□□□□□ -1.68
RXT3	YDL076C	BCD1	P38772	366 aa		4.54	□□□□□ -1.68
RXT3	YDL076C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
RXT3	YDL076C	UBP7	P40453	1071 aa		4.54	□□□□□ -1.68
RXT3	YDL076C	URM1	P40554	99 aa	Predicted RBP	4.54	□□□□□ -1.68
RXT3	YDL076C	SAP185	P40856	1058 aa		4.54	□□□□□ -1.68
RXT3	YDL076C	CDC1	P40986	491 aa		4.54	□□□□□ -1.68
RXT3	YDL076C	PFA3	P42836	336 aa		4.54	□□□□□ -1.68
RXT3	YDL076C	SET2	P46995	733 aa	Known RBP	4.54	□□□□□ -1.68
RXT3	YDL076C	PYK2	P52489	506 aa	Known RBP	4.54	□□□□□ -1.68
RXT3	YDL076C	YGR021W	P53212	290 aa		4.54	□□□□□ -1.68
RXT3	YDL076C	COQ6	P53318	479 aa		4.54	□□□□□ -1.68
RXT3	YDL076C	HST1	P53685	503 aa		4.54	□□□□□ -1.68
RXT3	YDL076C	PLB2	Q03674	706 aa		4.54	□□□□□ -1.68
RXT3	YDL076C	RTN1	Q04947	295 aa	Known RBP	4.54	□□□□□ -1.68
RXT3	YDL076C	TAF9	Q05027	157 aa		4.54	□□□□□ -1.68
RXT3	YDL076C	YLR297W	Q05899	129 aa		4.54	□□□□□ -1.68
RXT3	YDL076C	SWM1	Q12379	170 aa		4.54	□□□□□ -1.68
RXT3	YDL076C	ARP7	Q12406	477 aa		4.54	□□□□□ -1.68
RXT3	YDL076C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms