RNA–Protein interactions for RNA: YDL007W

RPT2, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT2, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT2YDL007W CCL1P37366 393 aa5.48□□□□□ -1.53
RPT2YDL007W CRP1P38845 465 aaKnown RBP5.48□□□□□ -1.53
RPT2YDL007W MPT5P39016 859 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
RPT2YDL007W GEM1P39722 662 aa5.48□□□□□ -1.53
RPT2YDL007W STL1P39932 569 aa5.48□□□□□ -1.53
RPT2YDL007W DSE1P40077 573 aa5.48□□□□□ -1.53
RPT2YDL007W NIT1P40447 199 aa5.48□□□□□ -1.53
RPT2YDL007W MET18P40469 1032 aa5.48□□□□□ -1.53
RPT2YDL007W MKT1P40850 830 aaKnown RBP5.48□□□□□ -1.53
RPT2YDL007W SWP82P43554 623 aa5.48□□□□□ -1.53
RPT2YDL007W FMP32P43557 207 aa5.48□□□□□ -1.53
RPT2YDL007W LAM5P43560 674 aa5.48□□□□□ -1.53
RPT2YDL007W YJL055WP47044 245 aa5.48□□□□□ -1.53
RPT2YDL007W ATP22P50273 684 aaPredicted RBP5.48□□□□□ -1.53
RPT2YDL007W NBP1P52919 319 aaPredicted RBP5.48□□□□□ -1.53
RPT2YDL007W PAN2P53010 1115 aaPredicted RBP5.48□□□□□ -1.53
RPT2YDL007W NMA2P53204 395 aa5.48□□□□□ -1.53
RPT2YDL007W COP1P53622 1201 aaKnown RBP5.48□□□□□ -1.53
RPT2YDL007W YDR239CQ03780 787 aa5.48□□□□□ -1.53
RPT2YDL007W RAD30Q04049 632 aa5.48□□□□□ -1.53
RPT2YDL007W YMR027WQ04371 470 aa5.48□□□□□ -1.53
RPT2YDL007W YLR297WQ05899 129 aa5.48□□□□□ -1.53
RPT2YDL007W ASA1Q06822 443 aa5.48□□□□□ -1.53
RPT2YDL007W YDL057WQ07379 328 aa5.48□□□□□ -1.53
RPT2YDL007W YDL114WQ07530 308 aa5.48□□□□□ -1.53
RPT2YDL007W NTG2Q08214 380 aa5.48□□□□□ -1.53
RPT2YDL007W YOR352WQ08816 343 aa5.48□□□□□ -1.53
RPT2YDL007W UIP4Q08926 304 aa5.48□□□□□ -1.53
RPT2YDL007W YLR053CQ12026 108 aa5.48□□□□□ -1.53
RPT2YDL007W ICL2Q12031 575 aa5.48□□□□□ -1.53
RPT2YDL007W LPX1Q12405 387 aaKnown RBP5.48□□□□□ -1.53
RPT2YDL007W RRD2Q12461 358 aa5.48□□□□□ -1.53
RPT2YDL007W NOT5Q12514 560 aaPredicted RBP5.48□□□□□ -1.53
RPT2YDL007W GLT1Q12680 2145 aaKnown RBP5.48□□□□□ -1.53
RPT2YDL007W REP1P03871 373 aa5.48□□□□□ -1.53
RPT2YDL007W MSD1P15179 658 aaKnown RBP5.48□□□□□ -1.53
RPT2YDL007W SNF5P18480 905 aa5.48□□□□□ -1.53
RPT2YDL007W FAR1P21268 830 aa5.48□□□□□ -1.53
RPT2YDL007W SNT1P25357 1226 aa5.48□□□□□ -1.53
RPT2YDL007W MSH2P25847 964 aa5.48□□□□□ -1.53
RPT2YDL007W RPS5P26783 225 aaKnown RBP5.48□□□□□ -1.53
RPT2YDL007W APE4P38821 490 aa5.48□□□□□ -1.53
RPT2YDL007W SPC72P39723 622 aa5.48□□□□□ -1.53
RPT2YDL007W YEN1P40028 759 aa5.48□□□□□ -1.53
RPT2YDL007W AVT6P40074 448 aa5.48□□□□□ -1.53
RPT2YDL007W YMR134WP40207 237 aa5.48□□□□□ -1.53
RPT2YDL007W SNL1P40548 159 aa5.48□□□□□ -1.53
RPT2YDL007W YJL107CP42947 387 aa5.48□□□□□ -1.53
RPT2YDL007W MRM2P53123 320 aa5.48□□□□□ -1.53
RPT2YDL007W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
RPT2YDL007W SWP1Q02795 286 aa5.48□□□□□ -1.53
RPT2YDL007W FIN1Q03898 291 aa5.48□□□□□ -1.53
RPT2YDL007W ERB1Q04660 807 aaKnown RBP5.48□□□□□ -1.53
RPT2YDL007W ARP9Q05123 467 aa5.48□□□□□ -1.53
RPT2YDL007W THI3Q07471 609 aa5.48□□□□□ -1.53
RPT2YDL007W DNL4Q08387 944 aaPredicted RBP5.48□□□□□ -1.53
RPT2YDL007W DSE3Q08729 430 aa5.48□□□□□ -1.53
RPT2YDL007W RKM1Q08961 583 aaPredicted RBP5.48□□□□□ -1.53
RPT2YDL007W YPR071WQ12346 211 aa5.48□□□□□ -1.53
RPT2YDL007W SSC1P0CS90 654 aaKnown RBP5.47□□□□□ -1.53
RPT2YDL007W RPL8AP17076 256 aaKnown RBP5.47□□□□□ -1.53
RPT2YDL007W SAN1P22470 610 aa5.47□□□□□ -1.53
RPT2YDL007W GFD2P25370 566 aaKnown RBP5.47□□□□□ -1.53
RPT2YDL007W KAR4P25583 335 aa5.47□□□□□ -1.53
RPT2YDL007W ACH1P32316 526 aa5.47□□□□□ -1.53
RPT2YDL007W AAR2P32357 355 aaPredicted RBP5.47□□□□□ -1.53
RPT2YDL007W SAS3P34218 831 aa5.47□□□□□ -1.53
RPT2YDL007W DUG2P38149 878 aa5.47□□□□□ -1.53
RPT2YDL007W YBR138CP38277 524 aa5.47□□□□□ -1.53
RPT2YDL007W POP4P38336 279 aa5.47□□□□□ -1.53
RPT2YDL007W CCT3P39077 534 aaKnown RBP5.47□□□□□ -1.53
RPT2YDL007W GDH3P39708 457 aa5.47□□□□□ -1.53
RPT2YDL007W SAH1P39954 449 aaKnown RBP5.47□□□□□ -1.53
RPT2YDL007W YJR054WP47114 497 aa5.47□□□□□ -1.53
RPT2YDL007W YGR266WP53326 701 aa5.47□□□□□ -1.53
RPT2YDL007W YTP1P53584 459 aa5.47□□□□□ -1.53
RPT2YDL007W BIO4P53630 237 aa5.47□□□□□ -1.53
RPT2YDL007W SNO2P53823 222 aa5.47□□□□□ -1.53
RPT2YDL007W SLU7Q02775 382 aaKnown RBP5.47□□□□□ -1.53
RPT2YDL007W SMC5Q08204 1093 aa5.47□□□□□ -1.53
RPT2YDL007W SGO1Q08490 590 aa5.47□□□□□ -1.53
RPT2YDL007W FAP7Q12055 197 aaPredicted RBP5.47□□□□□ -1.53
RPT2YDL007W VPS5Q92331 675 aa5.47□□□□□ -1.53
RPT2YDL007W BRR1Q99177 341 aaPredicted RBP5.47□□□□□ -1.53
RPT2YDL007W FLO1P32768 1537 aa5.46□□□□□ -1.53
RPT2YDL007W SEN1Q00416 2231 aaKnown RBP5.46□□□□□ -1.54
RPT2YDL007W ATP2P00830 511 aaKnown RBP5.46□□□□□ -1.54
RPT2YDL007W HIS3P06633 220 aa5.46□□□□□ -1.54
RPT2YDL007W COR1P07256 457 aa5.46□□□□□ -1.54
RPT2YDL007W KIN2P13186 1147 aaKnown RBP5.46□□□□□ -1.54
RPT2YDL007W VPS34P22543 875 aa5.46□□□□□ -1.54
RPT2YDL007W DBP2P24783 546 aaKnown RBP5.46□□□□□ -1.54
RPT2YDL007W CAD1P24813 409 aaKnown RBP5.46□□□□□ -1.54
RPT2YDL007W MGT1P26188 188 aa5.46□□□□□ -1.54
RPT2YDL007W DBF4P32325 704 aa5.46□□□□□ -1.54
RPT2YDL007W TFC1P32367 649 aa5.46□□□□□ -1.54
RPT2YDL007W SFP1P32432 683 aa5.46□□□□□ -1.54
RPT2YDL007W YHR112CP38716 378 aa5.46□□□□□ -1.54
RPT2YDL007W SMF2P38778 549 aa5.46□□□□□ -1.54
RPT2YDL007W YDR089WP38966 869 aa5.46□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms