RNA–Protein interactions for RNA: YCL005W-A

VMA9, Transcript of Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex, yeastyeast

Gene VMA9, Length 222 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA9YCL005W-A SIN4P32259 974 aa2.38□□□□□ -2.03
VMA9YCL005W-A PET309P32522 965 aaPredicted RBP2.38□□□□□ -2.03
VMA9YCL005W-A DSS4P32601 143 aa2.38□□□□□ -2.03
VMA9YCL005W-A ARC19P33204 171 aaKnown RBP2.38□□□□□ -2.03
VMA9YCL005W-A NIP100P33420 868 aa2.38□□□□□ -2.03
VMA9YCL005W-A CPR5P35176 225 aa2.38□□□□□ -2.03
VMA9YCL005W-A KDX1P36005 433 aa2.38□□□□□ -2.03
VMA9YCL005W-A FLO10P36170 1169 aa2.38□□□□□ -2.03
VMA9YCL005W-A JNM1P36224 373 aa2.38□□□□□ -2.03
VMA9YCL005W-A APL3P38065 1025 aa2.38□□□□□ -2.03
VMA9YCL005W-A YBR242WP38331 238 aa2.38□□□□□ -2.03
VMA9YCL005W-A EFM2P38347 419 aa2.38□□□□□ -2.03
VMA9YCL005W-A OSH3P38713 996 aaKnown RBP2.38□□□□□ -2.03
VMA9YCL005W-A PIH1P38768 344 aa2.38□□□□□ -2.03
VMA9YCL005W-A KOG1P38873 1557 aa2.38□□□□□ -2.03
VMA9YCL005W-A PMC1P38929 1173 aaPredicted RBP2.38□□□□□ -2.03
VMA9YCL005W-A YEL025CP39991 1188 aa2.38□□□□□ -2.03
VMA9YCL005W-A SPO22P40511 975 aa2.38□□□□□ -2.03
VMA9YCL005W-A HIS6P40545 261 aa2.38□□□□□ -2.03
VMA9YCL005W-A GSM1P42950 618 aa2.38□□□□□ -2.03
VMA9YCL005W-A QRI7P43122 407 aa2.38□□□□□ -2.03
VMA9YCL005W-A ALB1P47019 175 aaPredicted RBP2.38□□□□□ -2.03
VMA9YCL005W-A MDV1P47025 714 aa2.38□□□□□ -2.03
VMA9YCL005W-A RBL2P48606 106 aaKnown RBP2.38□□□□□ -2.03
VMA9YCL005W-A PIP2P52960 996 aa2.38□□□□□ -2.03
VMA9YCL005W-A CGR1P53188 120 aa2.38□□□□□ -2.03
VMA9YCL005W-A BUD17P53727 317 aa2.38□□□□□ -2.03
VMA9YCL005W-A HEF3P53978 1044 aaKnown RBP2.38□□□□□ -2.03
VMA9YCL005W-A TMA20P89886 181 aaPredicted RBP2.38□□□□□ -2.03
VMA9YCL005W-A RPL6AQ02326 176 aaKnown RBP2.38□□□□□ -2.03
VMA9YCL005W-A FCP1Q03254 732 aa2.38□□□□□ -2.03
VMA9YCL005W-A FIN1Q03898 291 aa2.38□□□□□ -2.03
VMA9YCL005W-A RRP17Q04031 235 aaPredicted RBP2.38□□□□□ -2.03
VMA9YCL005W-A GTB1Q04924 702 aa2.38□□□□□ -2.03
VMA9YCL005W-A YSP2Q06681 1438 aa2.38□□□□□ -2.03
VMA9YCL005W-A SYO1Q07395 620 aa2.38□□□□□ -2.03
VMA9YCL005W-A VAM6Q07468 1049 aa2.38□□□□□ -2.03
VMA9YCL005W-A SDH5Q08230 162 aa2.38□□□□□ -2.03
VMA9YCL005W-A GPN2Q08726 347 aaPredicted RBP2.38□□□□□ -2.03
VMA9YCL005W-A RKM1Q08961 583 aaPredicted RBP2.38□□□□□ -2.03
VMA9YCL005W-A MED2Q12124 431 aa2.38□□□□□ -2.03
VMA9YCL005W-A RIO1Q12196 484 aaKnown RBP2.38□□□□□ -2.03
VMA9YCL005W-A NYV1Q12255 253 aa2.38□□□□□ -2.03
VMA9YCL005W-A MDM20Q12387 796 aaKnown RBP2.38□□□□□ -2.03
VMA9YCL005W-A APC2Q12440 853 aa2.38□□□□□ -2.03
VMA9YCL005W-A TY3B-IQ7LHG5 1498 aaKnown RBP2.38□□□□□ -2.03
VMA9YCL005W-A RTC1Q08281 1341 aa2.38□□□□□ -2.03
VMA9YCL005W-A GDB1Q06625 1536 aa2.37□□□□□ -2.03
VMA9YCL005W-A SEC18P18759 758 aaKnown RBP2.37□□□□□ -2.03
VMA9YCL005W-A CDC43P18898 376 aa2.37□□□□□ -2.03
VMA9YCL005W-A YAP1P19880 650 aaKnown RBP2.37□□□□□ -2.03
VMA9YCL005W-A PWP1P21304 576 aaKnown RBP2.37□□□□□ -2.03
VMA9YCL005W-A RPS5P26783 225 aaKnown RBP2.37□□□□□ -2.03
VMA9YCL005W-A RPS7AP26786 190 aaKnown RBP2.37□□□□□ -2.03
VMA9YCL005W-A CDC15P27636 974 aa2.37□□□□□ -2.03
VMA9YCL005W-A CNE1P27825 502 aa2.37□□□□□ -2.03
VMA9YCL005W-A RAD16P31244 790 aa2.37□□□□□ -2.03
VMA9YCL005W-A YMC1P32331 307 aa2.37□□□□□ -2.03
VMA9YCL005W-A SMY1P32364 656 aaKnown RBP2.37□□□□□ -2.03
VMA9YCL005W-A PDB1P32473 366 aaKnown RBP2.37□□□□□ -2.03
VMA9YCL005W-A PEX2P32800 271 aa2.37□□□□□ -2.03
VMA9YCL005W-A RIB7P33312 244 aa2.37□□□□□ -2.03
VMA9YCL005W-A DBP7P36120 742 aaKnown RBP2.37□□□□□ -2.03
VMA9YCL005W-A SRL3P36167 246 aa2.37□□□□□ -2.03
VMA9YCL005W-A YPT10P38146 199 aa2.37□□□□□ -2.03
VMA9YCL005W-A HEK2P38199 381 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
VMA9YCL005W-A SPP381P38282 291 aaPredicted RBP2.37□□□□□ -2.03
VMA9YCL005W-A SIP3P38717 1229 aa2.37□□□□□ -2.03
VMA9YCL005W-A MUP3P38734 546 aa2.37□□□□□ -2.03
VMA9YCL005W-A BFR1P38934 470 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
VMA9YCL005W-A PCF11P39081 626 aaPredicted RBP2.37□□□□□ -2.03
VMA9YCL005W-A YJL193WP39542 402 aa2.37□□□□□ -2.03
VMA9YCL005W-A SAW1P39735 261 aa2.37□□□□□ -2.03
VMA9YCL005W-A TIF4631P39935 952 aaKnown RBP2.37□□□□□ -2.03
VMA9YCL005W-A BUD16P39988 312 aa2.37□□□□□ -2.03
VMA9YCL005W-A SER3P40054 469 aa2.37□□□□□ -2.03
VMA9YCL005W-A MAM1P40065 302 aa2.37□□□□□ -2.03
VMA9YCL005W-A GLG2P47011 380 aa2.37□□□□□ -2.03
VMA9YCL005W-A YJR079WP47126 109 aa2.37□□□□□ -2.03
VMA9YCL005W-A PUS4P48567 403 aaKnown RBP2.37□□□□□ -2.03
VMA9YCL005W-A COS12P53053 380 aa2.37□□□□□ -2.03
VMA9YCL005W-A MPS2P53159 387 aa2.37□□□□□ -2.03
VMA9YCL005W-A CAF130P53280 1122 aaPredicted RBP2.37□□□□□ -2.03
VMA9YCL005W-A IMP4P53941 290 aaKnown RBP2.37□□□□□ -2.03
VMA9YCL005W-A YKR005CQ02203 525 aa2.37□□□□□ -2.03
VMA9YCL005W-A ATG26Q06321 1198 aa2.37□□□□□ -2.03
VMA9YCL005W-A VAC14Q06708 880 aa2.37□□□□□ -2.03
VMA9YCL005W-A APC5Q08683 685 aa2.37□□□□□ -2.03
VMA9YCL005W-A PCL8Q08966 492 aa2.37□□□□□ -2.03
VMA9YCL005W-A ATP16Q12165 160 aa2.37□□□□□ -2.03
VMA9YCL005W-A HOS1Q12214 470 aa2.37□□□□□ -2.03
VMA9YCL005W-A HSP42Q12329 375 aa2.37□□□□□ -2.03
VMA9YCL005W-A OCA6Q12454 224 aa2.37□□□□□ -2.03
VMA9YCL005W-A MLP1Q02455 1875 aaKnown RBP2.37□□□□□ -2.03
VMA9YCL005W-A YCF1P39109 1515 aaKnown RBP2.37□□□□□ -2.03
VMA9YCL005W-A TY1B-DR4Q07793 1604 aa2.36□□□□□ -2.03
VMA9YCL005W-A LEU2P04173 364 aaPredicted RBP2.36□□□□□ -2.03
VMA9YCL005W-A RPL22AP05749 121 aaKnown RBP2.36□□□□□ -2.03
VMA9YCL005W-A TPK2P06245 380 aa2.36□□□□□ -2.03
VMA9YCL005W-A CMD1P06787 147 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms