RNA–Protein interactions for RNA: YBR055C

PRP6, Transcript of Splicing factor, yeastyeast

Gene PRP6, Length 2,700 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP6YBR055C UBX6P47049 396 aa2.5□□□□□ -2.01
PRP6YBR055C BNI5P53890 448 aaKnown RBP2.5□□□□□ -2.01
PRP6YBR055C UFO1Q04511 668 aa2.5□□□□□ -2.01
PRP6YBR055C PEP1P32319 1579 aa2.5□□□□□ -2.01
PRP6YBR055C COX1P00401 534 aa2.49□□□□□ -2.01
PRP6YBR055C DFR1P07807 211 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
PRP6YBR055C REC107P21651 314 aa2.49□□□□□ -2.01
PRP6YBR055C GAS1P22146 559 aaKnown RBP2.49□□□□□ -2.01
PRP6YBR055C TOD6P34219 525 aa2.49□□□□□ -2.01
PRP6YBR055C APL3P38065 1025 aa2.49□□□□□ -2.01
PRP6YBR055C CST26P38226 397 aa2.49□□□□□ -2.01
PRP6YBR055C GDI1P39958 451 aaKnown RBP2.49□□□□□ -2.01
PRP6YBR055C THI6P41835 540 aa2.49□□□□□ -2.01
PRP6YBR055C ROK1P45818 564 aaPredicted RBP2.49□□□□□ -2.01
PRP6YBR055C CTK2P46962 323 aa2.49□□□□□ -2.01
PRP6YBR055C BUL1P48524 976 aa2.49□□□□□ -2.01
PRP6YBR055C CTR1P49573 406 aa2.49□□□□□ -2.01
PRP6YBR055C SPC98P53540 846 aa2.49□□□□□ -2.01
PRP6YBR055C SNF12P53628 566 aa2.49□□□□□ -2.01
PRP6YBR055C YAT1P80235 687 aa2.49□□□□□ -2.01
PRP6YBR055C YML053CQ04978 212 aa2.49□□□□□ -2.01
PRP6YBR055C ECM22Q05958 814 aaPredicted RBP2.49□□□□□ -2.01
PRP6YBR055C PDH1Q12428 516 aaKnown RBP2.49□□□□□ -2.01
PRP6YBR055C AI5_ALPHAQ9ZZX1 630 aa2.49□□□□□ -2.01
PRP6YBR055C GAL80P04387 435 aa2.49□□□□□ -2.01
PRP6YBR055C ARD1P07347 238 aaPredicted RBP2.49□□□□□ -2.01
PRP6YBR055C APE1P14904 514 aa2.49□□□□□ -2.01
PRP6YBR055C DAL5P15365 543 aa2.49□□□□□ -2.01
PRP6YBR055C VMA16P23968 213 aa2.49□□□□□ -2.01
PRP6YBR055C KRR1P25586 316 aaPredicted RBP2.49□□□□□ -2.01
PRP6YBR055C PAP1P29468 568 aaKnown RBP2.49□□□□□ -2.01
PRP6YBR055C OMA1P36163 345 aa2.49□□□□□ -2.01
PRP6YBR055C BUR6P40096 142 aa2.49□□□□□ -2.01
PRP6YBR055C SEC28P40509 296 aaKnown RBP2.49□□□□□ -2.01
PRP6YBR055C ECL1P48235 211 aa2.49□□□□□ -2.01
PRP6YBR055C RIM8P53179 542 aa2.49□□□□□ -2.01
PRP6YBR055C RPS15Q01855 142 aaKnown RBP2.49□□□□□ -2.01
PRP6YBR055C UBP16Q02863 499 aa2.49□□□□□ -2.01
PRP6YBR055C YDR109CQ04585 715 aa2.49□□□□□ -2.01
PRP6YBR055C VPS38Q05919 439 aa2.49□□□□□ -2.01
PRP6YBR055C MRI1Q06489 411 aaKnown RBP2.49□□□□□ -2.01
PRP6YBR055C SWA2Q06677 668 aa2.49□□□□□ -2.01
PRP6YBR055C SMF3Q12078 473 aaPredicted RBP2.49□□□□□ -2.01
PRP6YBR055C SSK2P53599 1579 aa2.49□□□□□ -2.01
PRP6YBR055C YML133CQ03099 1374 aa2.49□□□□□ -2.01
PRP6YBR055C YLL067CQ07888 1374 aa2.49□□□□□ -2.01
PRP6YBR055C YLL066CQ99208 1374 aa2.49□□□□□ -2.01
PRP6YBR055C LAM4P38800 1345 aa2.49□□□□□ -2.01
PRP6YBR055C AMD2P22580 549 aa2.48□□□□□ -2.01
PRP6YBR055C ERG4P25340 473 aa2.48□□□□□ -2.01
PRP6YBR055C YCR051WP25631 222 aa2.48□□□□□ -2.01
PRP6YBR055C CNE1P27825 502 aa2.48□□□□□ -2.01
PRP6YBR055C LOT5P34234 306 aa2.48□□□□□ -2.01
PRP6YBR055C YKL100CP34248 587 aa2.48□□□□□ -2.01
PRP6YBR055C ERC1P38767 581 aa2.48□□□□□ -2.01
PRP6YBR055C POP2P39008 433 aa2.48□□□□□ -2.01
PRP6YBR055C CCT6P39079 546 aa2.48□□□□□ -2.01
PRP6YBR055C YIL166CP40445 542 aa2.48□□□□□ -2.01
PRP6YBR055C IRC8P47046 822 aa2.48□□□□□ -2.01
PRP6YBR055C PET130P47065 347 aa2.48□□□□□ -2.01
PRP6YBR055C NPA3P47122 385 aa2.48□□□□□ -2.01
PRP6YBR055C MSE1P48525 536 aa2.48□□□□□ -2.01
PRP6YBR055C STR3P53101 465 aaKnown RBP2.48□□□□□ -2.01
PRP6YBR055C NNF2P53253 936 aa2.48□□□□□ -2.01
PRP6YBR055C VPS9P54787 451 aa2.48□□□□□ -2.01
PRP6YBR055C OAZ1Q02803 292 aa2.48□□□□□ -2.01
PRP6YBR055C PEX25Q02969 394 aa2.48□□□□□ -2.01
PRP6YBR055C FMP45Q07651 309 aa2.48□□□□□ -2.01
PRP6YBR055C ESC8Q08119 714 aa2.48□□□□□ -2.01
PRP6YBR055C PGC1Q08959 321 aa2.48□□□□□ -2.01
PRP6YBR055C TGS1Q12052 315 aa2.48□□□□□ -2.01
PRP6YBR055C ATG29Q12092 213 aa2.48□□□□□ -2.01
PRP6YBR055C SPT6P23615 1451 aaKnown RBP2.48□□□□□ -2.01
PRP6YBR055C MDS3P53094 1487 aa2.48□□□□□ -2.01
PRP6YBR055C NTR2P36118 322 aaPredicted RBP2.48□□□□□ -2.01
PRP6YBR055C RPF2P36160 344 aaKnown RBP2.48□□□□□ -2.01
PRP6YBR055C MNN2P38069 597 aa2.48□□□□□ -2.01
PRP6YBR055C SWP82P43554 623 aa2.48□□□□□ -2.01
PRP6YBR055C MNN10P50108 393 aaKnown RBP2.48□□□□□ -2.01
PRP6YBR055C VID30P53076 958 aa2.48□□□□□ -2.01
PRP6YBR055C MRD1Q06106 887 aaKnown RBP2.48□□□□□ -2.01
PRP6YBR055C YDL242WQ07746 117 aa2.48□□□□□ -2.01
PRP6YBR055C AFI1Q99222 893 aa2.48□□□□□ -2.01
PRP6YBR055C ALG7P07286 448 aa2.48□□□□□ -2.01
PRP6YBR055C MDH1P17505 334 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
PRP6YBR055C STE4P18851 423 aa2.48□□□□□ -2.01
PRP6YBR055C STE11P23561 717 aa2.48□□□□□ -2.01
PRP6YBR055C RRP7P25368 297 aaPredicted RBP2.48□□□□□ -2.01
PRP6YBR055C AAD3P25612 363 aa2.48□□□□□ -2.01
PRP6YBR055C ERV1P27882 189 aa2.48□□□□□ -2.01
PRP6YBR055C PDB1P32473 366 aaKnown RBP2.48□□□□□ -2.01
PRP6YBR055C GDA1P32621 518 aa2.48□□□□□ -2.01
PRP6YBR055C TFB1P32776 642 aa2.48□□□□□ -2.01
PRP6YBR055C YNL092WP53934 400 aa2.48□□□□□ -2.01
PRP6YBR055C ADE16P54113 591 aaKnown RBP2.48□□□□□ -2.01
PRP6YBR055C YPL062WQ02781 134 aa2.48□□□□□ -2.01
PRP6YBR055C INA17Q02888 182 aa2.48□□□□□ -2.01
PRP6YBR055C LUC7Q07508 261 aaPredicted RBP2.48□□□□□ -2.01
PRP6YBR055C MRN1Q08925 612 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
PRP6YBR055C NFI1Q12216 726 aa2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms