RNA–Protein interactions for RNA: ENSMUST00000116359.2

Ctc1-202, Transcript of CST complex subunit CTC1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ctc1, Length 3,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-202ENSMUST00000116359 Sap30bpQ02614 308 aa11.38□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Ddx3xQ62167 662 aaKnown RBP11.38□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Lrrc45Q8CIM1 670 aa11.38□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Zscan18E9PUD6 809 aa11.38□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Cyp2d34L7N463 504 aa11.38□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Sdc2P43407 202 aa11.38□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Exosc10P56960 887 aaKnown RBP11.38□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Casp4P70343 373 aa11.38□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Slc35g1Q8BY79 368 aa11.38□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Usp20Q8C6M1 916 aa11.38□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Vps53Q8CCB4 832 aa11.38□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Arhgef16Q3U5C8 713 aa11.37□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Gja3Q64448 417 aa11.37□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Papd7Q6PB75 542 aa11.37□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Gigyf2Q6Y7W8 1291 aaKnown RBP11.37□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Armcx6Q8K3A6 301 aa11.37□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Ranbp17Q99NF8 1088 aa11.37□□□□□ -0.59
Ctc1-202ENSMUST00000116359 CflarO35732 481 aa11.37□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Snx12O70493 165 aa11.37□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Nr1d1Q3UV55 615 aa11.37□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Xlr3bQ6P205 226 aa11.37□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Cul5Q9D5V5 780 aa11.37□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Lrrc34Q9DAM1 415 aa11.37□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Pus3Q9JI38 481 aa11.37□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Ercc4Q9QZD4 917 aa11.37□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Sept3Q9Z1S5 350 aa11.37□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Slit3Q9WVB4 1523 aa11.37□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Ildr2B5TVM2 661 aa11.37□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Gm20425E9Q035 978 aaKnown RBP11.37□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Trove2O08848 538 aa11.37□□□□□ -0.59
Ctc1-202ENSMUST00000116359 PnnO35691 725 aaKnown RBP11.37□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Trmt1Q3TX08 663 aa11.37□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Ccdc50Q810U5 305 aaKnown RBP11.37□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Iffo1Q8BXL9 562 aa11.37□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Larp1bA0A0A6YXJ7 370 aaKnown RBP11.36□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Akr1b10G5E895 316 aa11.36□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Atf5O70191 283 aa11.36□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Tmprss11aQ3UQ41 389 aa11.36□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Cypt2Q6P924 180 aa11.36□□□□□ -0.59
Ctc1-202ENSMUST00000116359 F13a1Q8BH61 732 aa11.36□□□□□ -0.59
Ctc1-202ENSMUST00000116359 MtrrQ8C1A3 696 aa11.36□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Vwa5aQ99KC8 793 aaKnown RBP11.36□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Gm28042B7ZCM9 1014 aa11.36□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Ebf2O08792 575 aa11.36□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Cplx1P63040 134 aa11.36□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Meis3P97368 378 aa11.36□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Kctd16Q5DTY9 427 aa11.36□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Orc2Q60862 576 aaKnown RBP11.36□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Phc1Q64028 1012 aa11.36□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Ddx47Q9CWX9 455 aaKnown RBP11.36□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Gfpt1P47856 697 aa11.36□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Jarid2Q62315 1234 aa11.36□□□□□ -0.59
Ctc1-202ENSMUST00000116359 PawrQ925B0 333 aa11.36□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Fam133bQ9CVI2 245 aaKnown RBP11.36□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Sf3a3Q9D554 501 aaKnown RBP11.36□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Gm5580A0A0N4SVP8 411 aa11.35□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Rbbp8nlA2ABX0 614 aa11.35□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Vmn2r23E9PXI5 849 aa11.35□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Tpp1O89023 562 aa11.35□□□□□ -0.59
Ctc1-202ENSMUST00000116359 RpsaP14206 295 aaKnown RBP11.35□□□□□ -0.59
Ctc1-202ENSMUST00000116359 G3bp2P97379 482 aaKnown RBP11.35□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Ehbp1Q69ZW3 1231 aa11.35□□□□□ -0.59
Ctc1-202ENSMUST00000116359 WlsQ6DID7 541 aa11.35□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Hook2Q7TMK6 716 aa11.35□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Thap2Q9D305 217 aa11.35□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Polr2dQ9D7M8 142 aaKnown RBP11.35□□□□□ -0.59
Ctc1-202ENSMUST00000116359 IncenpQ9WU62 880 aa11.35□□□□□ -0.59
Ctc1-202ENSMUST00000116359 PplQ9R269 1755 aa11.35□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Scgb2b18A0A087WPA9 112 aa11.35□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Grin1P35438 938 aa11.35□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Abcd1P48410 736 aa11.35□□□□□ -0.59
Ctc1-202ENSMUST00000116359 VeztQ3ZK22 780 aa11.35□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Anks1bQ8BIZ1 1259 aa11.35□□□□□ -0.59
Ctc1-202ENSMUST00000116359 RalylQ8BTF8 293 aa11.35□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Ccdc43Q9CR29 222 aaKnown RBP11.35□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Rreb1Q3UH06 1700 aaKnown RBP11.35□□□□□ -0.59
Ctc1-202ENSMUST00000116359 VimP20152 466 aaKnown RBP11.35□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Tmod1P49813 359 aa11.35□□□□□ -0.59
Ctc1-202ENSMUST00000116359 SfswapQ3USH5 945 aaKnown RBP11.35□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Serpinb1cQ5SV42 375 aa11.35□□□□□ -0.59
Ctc1-202ENSMUST00000116359 AmphQ7TQF7 686 aa11.35□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Uso1Q9Z1Z0 959 aaKnown RBP11.35□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Lrrn2Q6PHP6 730 aa11.35□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Larp6Q8BN59 492 aa11.35□□□□□ -0.59
Ctc1-202ENSMUST00000116359 AidaQ8C4Q6 305 aa11.35□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Usp33Q8R5K2 909 aa11.35□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Pde3aQ9Z0X4 1141 aa11.35□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Nr1i2O54915 431 aa11.34□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Cyp26a1O55127 497 aa11.34□□□□□ -0.59
Ctc1-202ENSMUST00000116359 CoilQ5SU73 570 aa11.34□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Pabpc4Q6PHQ9 660 aaKnown RBP11.34□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Dnph1Q80VJ3 173 aa11.34□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Clic6Q8BHB9 596 aa11.34□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Lmbrd2Q8C561 694 aa11.34□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Pex19Q8VCI5 299 aa11.34□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Nsmce1Q9D720 266 aa11.34□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Scgb2b7D3YYY1 112 aa11.34□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Opa1P58281 960 aa11.34□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Zbed4Q80WQ9 1168 aa11.34□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Sec24bQ80ZX0 1251 aa11.34□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms