Protein–RNA interactions for Protein: O54915

Nr1i2, Nuclear receptor subfamily 1 group I member 2, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i2O54915 Gm25239-201ENSMUST00000174915 86 ntBASIC41.3■■■■■ 4.2
Nr1i2O54915 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC38.52■■■■□ 3.76
Nr1i2O54915 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.92■■■■□ 3.66
Nr1i2O54915 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC37.5■■■■□ 3.59
Nr1i2O54915 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.46■■■■□ 3.59
Nr1i2O54915 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC37.23■■■■□ 3.55
Nr1i2O54915 Gm15042-201ENSMUST00000120212 883 ntBASIC36.67■■■■□ 3.46
Nr1i2O54915 Gm15045-201ENSMUST00000117359 883 ntBASIC35.97■■■■□ 3.35
Nr1i2O54915 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
Nr1i2O54915 Psd-208ENSMUST00000224556 2034 ntBASIC35.77■■■■□ 3.32
Nr1i2O54915 Gm24109-201ENSMUST00000175489 103 ntBASIC35.55■■■■□ 3.28
Nr1i2O54915 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
Nr1i2O54915 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC35.23■■■■□ 3.23
Nr1i2O54915 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35.21■■■■□ 3.23
Nr1i2O54915 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
Nr1i2O54915 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.83■■■■□ 3.17
Nr1i2O54915 Gm23366-201ENSMUST00000175022 89 ntBASIC34.58■■■■□ 3.13
Nr1i2O54915 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.57■■■■□ 3.12
Nr1i2O54915 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Nr1i2O54915 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Nr1i2O54915 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC34.51■■■■□ 3.11
Nr1i2O54915 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.46■■■■□ 3.11
Nr1i2O54915 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Nr1i2O54915 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
Nr1i2O54915 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Nr1i2O54915 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34.37■■■■□ 3.09
Nr1i2O54915 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34.31■■■■□ 3.08
Nr1i2O54915 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Nr1i2O54915 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
Nr1i2O54915 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
Nr1i2O54915 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
Nr1i2O54915 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.91■■■■□ 3.02
Nr1i2O54915 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.83■■■■□ 3.01
Nr1i2O54915 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
Nr1i2O54915 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
Nr1i2O54915 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.72■■■□□ 2.99
Nr1i2O54915 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.65■■■□□ 2.98
Nr1i2O54915 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
Nr1i2O54915 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33.44■■■□□ 2.94
Nr1i2O54915 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Nr1i2O54915 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33.31■■■□□ 2.92
Nr1i2O54915 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC33.17■■■□□ 2.9
Nr1i2O54915 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.95■■■□□ 2.87
Nr1i2O54915 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Nr1i2O54915 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
Nr1i2O54915 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.93■■■□□ 2.86
Nr1i2O54915 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Nr1i2O54915 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.83■■■□□ 2.85
Nr1i2O54915 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Nr1i2O54915 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Nr1i2O54915 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Nr1i2O54915 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Nr1i2O54915 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Nr1i2O54915 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Nr1i2O54915 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.52■■■□□ 2.8
Nr1i2O54915 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
Nr1i2O54915 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.45■■■□□ 2.79
Nr1i2O54915 Gm25238-201ENSMUST00000174914 89 ntBASIC32.42■■■□□ 2.78
Nr1i2O54915 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Nr1i2O54915 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
Nr1i2O54915 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.32■■■□□ 2.76
Nr1i2O54915 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Nr1i2O54915 CT025624.2-201ENSMUST00000223609 1909 ntBASIC32.28■■■□□ 2.76
Nr1i2O54915 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.25■■■□□ 2.75
Nr1i2O54915 Gm27325-201ENSMUST00000175467 74 ntBASIC32.24■■■□□ 2.75
Nr1i2O54915 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.22■■■□□ 2.75
Nr1i2O54915 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Nr1i2O54915 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32.2■■■□□ 2.74
Nr1i2O54915 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.17■■■□□ 2.74
Nr1i2O54915 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC32.17■■■□□ 2.74
Nr1i2O54915 Gm42596-201ENSMUST00000196305 1958 ntBASIC32.16■■■□□ 2.74
Nr1i2O54915 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.02■■■□□ 2.72
Nr1i2O54915 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Nr1i2O54915 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Nr1i2O54915 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.86■■■□□ 2.69
Nr1i2O54915 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.83■■■□□ 2.69
Nr1i2O54915 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Nr1i2O54915 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Nr1i2O54915 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Nr1i2O54915 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Nr1i2O54915 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Nr1i2O54915 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Nr1i2O54915 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Nr1i2O54915 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Nr1i2O54915 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
Nr1i2O54915 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.56■■■□□ 2.64
Nr1i2O54915 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.55■■■□□ 2.64
Nr1i2O54915 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Nr1i2O54915 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.53■■■□□ 2.64
Nr1i2O54915 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
Nr1i2O54915 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
Nr1i2O54915 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Nr1i2O54915 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Nr1i2O54915 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Nr1i2O54915 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Nr1i2O54915 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Nr1i2O54915 Rab21-202ENSMUST00000218831 843 ntBASIC31.27■■■□□ 2.6
Nr1i2O54915 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
Nr1i2O54915 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.24■■■□□ 2.59
Nr1i2O54915 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms