Protein–RNA interactions for Protein: Q8BN59

Larp6, La-related protein 6, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Larp6Q8BN59 Gm25239-201ENSMUST00000174915 86 ntBASIC41.95■■■■■ 4.31
Larp6Q8BN59 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC39.04■■■■□ 3.84
Larp6Q8BN59 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38.57■■■■□ 3.76
Larp6Q8BN59 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC38.02■■■■□ 3.68
Larp6Q8BN59 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC37.92■■■■□ 3.66
Larp6Q8BN59 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC37.63■■■■□ 3.61
Larp6Q8BN59 Gm15042-201ENSMUST00000120212 883 ntBASIC37.09■■■■□ 3.53
Larp6Q8BN59 Gm15045-201ENSMUST00000117359 883 ntBASIC36.4■■■■□ 3.42
Larp6Q8BN59 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
Larp6Q8BN59 Psd-208ENSMUST00000224556 2034 ntBASIC36.25■■■■□ 3.39
Larp6Q8BN59 Gm24109-201ENSMUST00000175489 103 ntBASIC36.14■■■■□ 3.38
Larp6Q8BN59 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
Larp6Q8BN59 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC35.66■■■■□ 3.3
Larp6Q8BN59 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35.6■■■■□ 3.29
Larp6Q8BN59 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
Larp6Q8BN59 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35.32■■■■□ 3.24
Larp6Q8BN59 Gm23366-201ENSMUST00000175022 89 ntBASIC35.02■■■■□ 3.2
Larp6Q8BN59 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC35■■■■□ 3.19
Larp6Q8BN59 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
Larp6Q8BN59 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.95■■■■□ 3.19
Larp6Q8BN59 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
Larp6Q8BN59 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC34.87■■■■□ 3.17
Larp6Q8BN59 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Larp6Q8BN59 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
Larp6Q8BN59 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34.85■■■■□ 3.17
Larp6Q8BN59 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
Larp6Q8BN59 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.17
Larp6Q8BN59 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
Larp6Q8BN59 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Larp6Q8BN59 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34.6■■■■□ 3.13
Larp6Q8BN59 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
Larp6Q8BN59 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Larp6Q8BN59 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC34.26■■■■□ 3.08
Larp6Q8BN59 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC34.21■■■■□ 3.07
Larp6Q8BN59 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34.16■■■■□ 3.06
Larp6Q8BN59 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Larp6Q8BN59 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.12■■■■□ 3.05
Larp6Q8BN59 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
Larp6Q8BN59 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33.89■■■■□ 3.02
Larp6Q8BN59 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
Larp6Q8BN59 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC33.73■■■□□ 2.99
Larp6Q8BN59 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33.51■■■□□ 2.96
Larp6Q8BN59 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.48■■■□□ 2.95
Larp6Q8BN59 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33.42■■■□□ 2.94
Larp6Q8BN59 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
Larp6Q8BN59 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
Larp6Q8BN59 Gm10524-201ENSMUST00000181931 1893 ntBASIC33.21■■■□□ 2.91
Larp6Q8BN59 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Larp6Q8BN59 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Larp6Q8BN59 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC33.16■■■□□ 2.9
Larp6Q8BN59 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Larp6Q8BN59 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Larp6Q8BN59 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Larp6Q8BN59 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.04■■■□□ 2.88
Larp6Q8BN59 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Larp6Q8BN59 Gm25238-201ENSMUST00000174914 89 ntBASIC32.99■■■□□ 2.87
Larp6Q8BN59 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Larp6Q8BN59 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
Larp6Q8BN59 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Larp6Q8BN59 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.75■■■□□ 2.83
Larp6Q8BN59 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Larp6Q8BN59 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Larp6Q8BN59 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Larp6Q8BN59 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
Larp6Q8BN59 CT025624.2-201ENSMUST00000223609 1909 ntBASIC32.65■■■□□ 2.82
Larp6Q8BN59 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.6■■■□□ 2.81
Larp6Q8BN59 Gm27325-201ENSMUST00000175467 74 ntBASIC32.6■■■□□ 2.81
Larp6Q8BN59 Gm42596-201ENSMUST00000196305 1958 ntBASIC32.57■■■□□ 2.8
Larp6Q8BN59 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC32.56■■■□□ 2.8
Larp6Q8BN59 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC32.56■■■□□ 2.8
Larp6Q8BN59 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.54■■■□□ 2.8
Larp6Q8BN59 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.53■■■□□ 2.8
Larp6Q8BN59 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32.52■■■□□ 2.8
Larp6Q8BN59 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Larp6Q8BN59 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.43■■■□□ 2.78
Larp6Q8BN59 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Larp6Q8BN59 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Larp6Q8BN59 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Larp6Q8BN59 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.18■■■□□ 2.74
Larp6Q8BN59 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Larp6Q8BN59 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC32.12■■■□□ 2.73
Larp6Q8BN59 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.98■■■□□ 2.71
Larp6Q8BN59 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Larp6Q8BN59 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Larp6Q8BN59 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Larp6Q8BN59 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Larp6Q8BN59 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.89■■■□□ 2.7
Larp6Q8BN59 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Larp6Q8BN59 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.86■■■□□ 2.69
Larp6Q8BN59 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Larp6Q8BN59 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Larp6Q8BN59 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
Larp6Q8BN59 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Larp6Q8BN59 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Larp6Q8BN59 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Larp6Q8BN59 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Larp6Q8BN59 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.67
Larp6Q8BN59 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Larp6Q8BN59 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.66■■■□□ 2.66
Larp6Q8BN59 Rab21-202ENSMUST00000218831 843 ntBASIC31.64■■■□□ 2.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms