Protein–RNA interactions for Protein: Q8C6M1

Usp20, Ubiquitin carboxyl-terminal hydrolase 20, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp20Q8C6M1 Gm25239-201ENSMUST00000174915 86 ntBASIC42.91■■■■■ 4.46
Usp20Q8C6M1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC39.74■■■■□ 3.95
Usp20Q8C6M1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.13■■■■□ 3.85
Usp20Q8C6M1 Gm15042-201ENSMUST00000120212 883 ntBASIC37.34■■■■□ 3.57
Usp20Q8C6M1 Gm24109-201ENSMUST00000175489 103 ntBASIC37.23■■■■□ 3.55
Usp20Q8C6M1 Gm15045-201ENSMUST00000117359 883 ntBASIC36.52■■■■□ 3.44
Usp20Q8C6M1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.42■■■■□ 3.42
Usp20Q8C6M1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
Usp20Q8C6M1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.2■■■■□ 3.39
Usp20Q8C6M1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35.97■■■■□ 3.35
Usp20Q8C6M1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
Usp20Q8C6M1 Gm23366-201ENSMUST00000175022 89 ntBASIC35.76■■■■□ 3.32
Usp20Q8C6M1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
Usp20Q8C6M1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.2■■■■□ 3.22
Usp20Q8C6M1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
Usp20Q8C6M1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34.81■■■■□ 3.16
Usp20Q8C6M1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.57■■■■□ 3.12
Usp20Q8C6M1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Usp20Q8C6M1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.5■■■■□ 3.11
Usp20Q8C6M1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.4■■■■□ 3.1
Usp20Q8C6M1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.39■■■■□ 3.1
Usp20Q8C6M1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.39■■■■□ 3.1
Usp20Q8C6M1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
Usp20Q8C6M1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Usp20Q8C6M1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
Usp20Q8C6M1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.98■■■■□ 3.03
Usp20Q8C6M1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.96■■■■□ 3.03
Usp20Q8C6M1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
Usp20Q8C6M1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
Usp20Q8C6M1 Gm25238-201ENSMUST00000174914 89 ntBASIC33.93■■■■□ 3.02
Usp20Q8C6M1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.93■■■■□ 3.02
Usp20Q8C6M1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33.83■■■■□ 3.01
Usp20Q8C6M1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
Usp20Q8C6M1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.65■■■□□ 2.98
Usp20Q8C6M1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.64■■■□□ 2.98
Usp20Q8C6M1 Psd-208ENSMUST00000224556 2034 ntBASIC33.44■■■□□ 2.94
Usp20Q8C6M1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.35■■■□□ 2.93
Usp20Q8C6M1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.93
Usp20Q8C6M1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.12■■■□□ 2.89
Usp20Q8C6M1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Usp20Q8C6M1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.99■■■□□ 2.87
Usp20Q8C6M1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
Usp20Q8C6M1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.96■■■□□ 2.87
Usp20Q8C6M1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.77■■■□□ 2.84
Usp20Q8C6M1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Usp20Q8C6M1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.73■■■□□ 2.83
Usp20Q8C6M1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32.72■■■□□ 2.83
Usp20Q8C6M1 Gm27325-201ENSMUST00000175467 74 ntBASIC32.71■■■□□ 2.83
Usp20Q8C6M1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Usp20Q8C6M1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.58■■■□□ 2.81
Usp20Q8C6M1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Usp20Q8C6M1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Usp20Q8C6M1 Gm25262-201ENSMUST00000174934 133 ntBASIC32.49■■■□□ 2.79
Usp20Q8C6M1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.32■■■□□ 2.76
Usp20Q8C6M1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Usp20Q8C6M1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.27■■■□□ 2.76
Usp20Q8C6M1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
Usp20Q8C6M1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Usp20Q8C6M1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.21■■■□□ 2.75
Usp20Q8C6M1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
Usp20Q8C6M1 Rab21-202ENSMUST00000218831 843 ntBASIC32.16■■■□□ 2.74
Usp20Q8C6M1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.09■■■□□ 2.73
Usp20Q8C6M1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
Usp20Q8C6M1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Usp20Q8C6M1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.93■■■□□ 2.7
Usp20Q8C6M1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.9■■■□□ 2.7
Usp20Q8C6M1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.89■■■□□ 2.7
Usp20Q8C6M1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Usp20Q8C6M1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.86■■■□□ 2.69
Usp20Q8C6M1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
Usp20Q8C6M1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.83■■■□□ 2.69
Usp20Q8C6M1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Usp20Q8C6M1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Usp20Q8C6M1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.74■■■□□ 2.67
Usp20Q8C6M1 Gm26115-201ENSMUST00000175605 87 ntBASIC31.72■■■□□ 2.67
Usp20Q8C6M1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Usp20Q8C6M1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Usp20Q8C6M1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Usp20Q8C6M1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Usp20Q8C6M1 Gm8109-201ENSMUST00000194076 746 ntBASIC31.6■■■□□ 2.65
Usp20Q8C6M1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Usp20Q8C6M1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
Usp20Q8C6M1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
Usp20Q8C6M1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Usp20Q8C6M1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Usp20Q8C6M1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
Usp20Q8C6M1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Usp20Q8C6M1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
Usp20Q8C6M1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.43■■■□□ 2.62
Usp20Q8C6M1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Usp20Q8C6M1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Usp20Q8C6M1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.38■■■□□ 2.61
Usp20Q8C6M1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
Usp20Q8C6M1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.36■■■□□ 2.61
Usp20Q8C6M1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Usp20Q8C6M1 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.35■■■□□ 2.61
Usp20Q8C6M1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Usp20Q8C6M1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.2■■■□□ 2.58
Usp20Q8C6M1 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.19■■■□□ 2.58
Usp20Q8C6M1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.16■■■□□ 2.58
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms