Protein–RNA interactions for Protein: Q8C561

Lmbrd2, LMBR1 domain-containing protein 2, mousemouse

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmbrd2Q8C561 Gm25239-201ENSMUST00000174915 86 ntBASIC44,95■■■■■ 4,79
Lmbrd2Q8C561 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC41,42■■■■■ 4,22
Lmbrd2Q8C561 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC40,8■■■■■ 4,12
Lmbrd2Q8C561 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC40,63■■■■■ 4,1
Lmbrd2Q8C561 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC39,62■■■■□ 3,93
Lmbrd2Q8C561 Gm15042-201ENSMUST00000120212 883 ntBASIC39,59■■■■□ 3,93
Lmbrd2Q8C561 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC39,2■■■■□ 3,87
Lmbrd2Q8C561 Gm24109-201ENSMUST00000175489 103 ntBASIC38,84■■■■□ 3,81
Lmbrd2Q8C561 Gm15045-201ENSMUST00000117359 883 ntBASIC38,83■■■■□ 3,81
Lmbrd2Q8C561 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC38,22■■■■□ 3,71
Lmbrd2Q8C561 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC38,02■■■■□ 3,68
Lmbrd2Q8C561 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC37,89■■■■□ 3,66
Lmbrd2Q8C561 Psd-208ENSMUST00000224556 2034 ntBASIC37,6■■■■□ 3,61
Lmbrd2Q8C561 Gm23366-201ENSMUST00000175022 89 ntBASIC37,52■■■■□ 3,6
Lmbrd2Q8C561 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC37,49■■■■□ 3,59
Lmbrd2Q8C561 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC37,45■■■■□ 3,59
Lmbrd2Q8C561 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC37,35■■■■□ 3,57
Lmbrd2Q8C561 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC37,19■■■■□ 3,54
Lmbrd2Q8C561 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC37,09■■■■□ 3,53
Lmbrd2Q8C561 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC37,03■■■■□ 3,52
Lmbrd2Q8C561 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC36,97■■■■□ 3,51
Lmbrd2Q8C561 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC36,88■■■■□ 3,49
Lmbrd2Q8C561 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC36,86■■■■□ 3,49
Lmbrd2Q8C561 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC36,77■■■■□ 3,48
Lmbrd2Q8C561 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC36,61■■■■□ 3,45
Lmbrd2Q8C561 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC36,55■■■■□ 3,44
Lmbrd2Q8C561 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC36,55■■■■□ 3,44
Lmbrd2Q8C561 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC36,43■■■■□ 3,42
Lmbrd2Q8C561 AC153911.1-202ENSMUST00000218534 1034 ntBASIC36,35■■■■□ 3,41
Lmbrd2Q8C561 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC36,28■■■■□ 3,4
Lmbrd2Q8C561 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC36,28■■■■□ 3,4
Lmbrd2Q8C561 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC36,1■■■■□ 3,37
Lmbrd2Q8C561 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC36,01■■■■□ 3,36
Lmbrd2Q8C561 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC35,97■■■■□ 3,35
Lmbrd2Q8C561 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC35,92■■■■□ 3,34
Lmbrd2Q8C561 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC35,59■■■■□ 3,29
Lmbrd2Q8C561 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC35,58■■■■□ 3,29
Lmbrd2Q8C561 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC35,52■■■■□ 3,28
Lmbrd2Q8C561 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC35,51■■■■□ 3,28
Lmbrd2Q8C561 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC35,51■■■■□ 3,28
Lmbrd2Q8C561 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC35,47■■■■□ 3,27
Lmbrd2Q8C561 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC35,44■■■■□ 3,26
Lmbrd2Q8C561 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC35,42■■■■□ 3,26
Lmbrd2Q8C561 Gm25238-201ENSMUST00000174914 89 ntBASIC35,4■■■■□ 3,26
Lmbrd2Q8C561 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC35,38■■■■□ 3,25
Lmbrd2Q8C561 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC35,3■■■■□ 3,24
Lmbrd2Q8C561 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC35,25■■■■□ 3,23
Lmbrd2Q8C561 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC35,21■■■■□ 3,23
Lmbrd2Q8C561 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC35,16■■■■□ 3,22
Lmbrd2Q8C561 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC35,06■■■■□ 3,2
Lmbrd2Q8C561 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC34,95■■■■□ 3,19
Lmbrd2Q8C561 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC34,95■■■■□ 3,18
Lmbrd2Q8C561 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC34,94■■■■□ 3,18
Lmbrd2Q8C561 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34,81■■■■□ 3,16
Lmbrd2Q8C561 Gm27325-201ENSMUST00000175467 74 ntBASIC34,76■■■■□ 3,16
Lmbrd2Q8C561 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC34,75■■■■□ 3,15
Lmbrd2Q8C561 Gm10524-201ENSMUST00000181931 1893 ntBASIC34,71■■■■□ 3,15
Lmbrd2Q8C561 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC34,7■■■■□ 3,15
Lmbrd2Q8C561 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC34,65■■■■□ 3,14
Lmbrd2Q8C561 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC34,61■■■■□ 3,13
Lmbrd2Q8C561 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC34,56■■■■□ 3,12
Lmbrd2Q8C561 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC34,52■■■■□ 3,12
Lmbrd2Q8C561 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC34,44■■■■□ 3,1
Lmbrd2Q8C561 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC34,43■■■■□ 3,1
Lmbrd2Q8C561 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC34,41■■■■□ 3,1
Lmbrd2Q8C561 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC34,39■■■■□ 3,1
Lmbrd2Q8C561 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC34,31■■■■□ 3,08
Lmbrd2Q8C561 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC34,3■■■■□ 3,08
Lmbrd2Q8C561 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC34,25■■■■□ 3,07
Lmbrd2Q8C561 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC34,23■■■■□ 3,07
Lmbrd2Q8C561 CT025624.2-201ENSMUST00000223609 1909 ntBASIC34,23■■■■□ 3,07
Lmbrd2Q8C561 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC34,23■■■■□ 3,07
Lmbrd2Q8C561 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC34,22■■■■□ 3,07
Lmbrd2Q8C561 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC34,21■■■■□ 3,07
Lmbrd2Q8C561 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC34,2■■■■□ 3,07
Lmbrd2Q8C561 Gm42596-201ENSMUST00000196305 1958 ntBASIC34,18■■■■□ 3,06
Lmbrd2Q8C561 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC34,12■■■■□ 3,05
Lmbrd2Q8C561 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC34,08■■■■□ 3,05
Lmbrd2Q8C561 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC34,02■■■■□ 3,04
Lmbrd2Q8C561 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC33,94■■■■□ 3,02
Lmbrd2Q8C561 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC33,9■■■■□ 3,02
Lmbrd2Q8C561 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC33,89■■■■□ 3,02
Lmbrd2Q8C561 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC33,88■■■■□ 3,01
Lmbrd2Q8C561 Rab21-202ENSMUST00000218831 843 ntBASIC33,87■■■■□ 3,01
Lmbrd2Q8C561 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC33,82■■■■□ 3,01
Lmbrd2Q8C561 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC33,71■■■□□ 2,99
Lmbrd2Q8C561 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC33,69■■■□□ 2,98
Lmbrd2Q8C561 Gm25262-201ENSMUST00000174934 133 ntBASIC33,64■■■□□ 2,98
Lmbrd2Q8C561 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC33,58■■■□□ 2,97
Lmbrd2Q8C561 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC33,54■■■□□ 2,96
Lmbrd2Q8C561 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC33,54■■■□□ 2,96
Lmbrd2Q8C561 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC33,54■■■□□ 2,96
Lmbrd2Q8C561 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC33,54■■■□□ 2,96
Lmbrd2Q8C561 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC33,51■■■□□ 2,95
Lmbrd2Q8C561 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC33,5■■■□□ 2,95
Lmbrd2Q8C561 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC33,47■■■□□ 2,95
Lmbrd2Q8C561 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC33,46■■■□□ 2,95
Lmbrd2Q8C561 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC33,44■■■□□ 2,94
Lmbrd2Q8C561 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC33,43■■■□□ 2,94
Lmbrd2Q8C561 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC33,42■■■□□ 2,94
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms