Protein–RNA interactions for Protein: A0A087WPA9

Scgb2b18, ABPBG18, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scgb2b18A0A087WPA9 Gm25239-201ENSMUST00000174915 86 ntBASIC39.03■■■■□ 3.84
Scgb2b18A0A087WPA9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC38.12■■■■□ 3.69
Scgb2b18A0A087WPA9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.89■■■■□ 3.5
Scgb2b18A0A087WPA9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.77■■■■□ 3.48
Scgb2b18A0A087WPA9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.69■■■■□ 3.3
Scgb2b18A0A087WPA9 Psd-208ENSMUST00000224556 2034 ntBASIC35.62■■■■□ 3.29
Scgb2b18A0A087WPA9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
Scgb2b18A0A087WPA9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
Scgb2b18A0A087WPA9 Gm15042-201ENSMUST00000120212 883 ntBASIC34.89■■■■□ 3.18
Scgb2b18A0A087WPA9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.72■■■■□ 3.15
Scgb2b18A0A087WPA9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Scgb2b18A0A087WPA9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Scgb2b18A0A087WPA9 Gm15045-201ENSMUST00000117359 883 ntBASIC34.34■■■■□ 3.09
Scgb2b18A0A087WPA9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
Scgb2b18A0A087WPA9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.27■■■■□ 3.08
Scgb2b18A0A087WPA9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
Scgb2b18A0A087WPA9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.05
Scgb2b18A0A087WPA9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
Scgb2b18A0A087WPA9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.72■■■□□ 2.99
Scgb2b18A0A087WPA9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.96
Scgb2b18A0A087WPA9 Gm24109-201ENSMUST00000175489 103 ntBASIC33.51■■■□□ 2.95
Scgb2b18A0A087WPA9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.47■■■□□ 2.95
Scgb2b18A0A087WPA9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Scgb2b18A0A087WPA9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
Scgb2b18A0A087WPA9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.31■■■□□ 2.92
Scgb2b18A0A087WPA9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.28■■■□□ 2.92
Scgb2b18A0A087WPA9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.28■■■□□ 2.92
Scgb2b18A0A087WPA9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.26■■■□□ 2.91
Scgb2b18A0A087WPA9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC33.24■■■□□ 2.91
Scgb2b18A0A087WPA9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33■■■□□ 2.87
Scgb2b18A0A087WPA9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Scgb2b18A0A087WPA9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Scgb2b18A0A087WPA9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Scgb2b18A0A087WPA9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
Scgb2b18A0A087WPA9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.88■■■□□ 2.85
Scgb2b18A0A087WPA9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.8■■■□□ 2.84
Scgb2b18A0A087WPA9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.73■■■□□ 2.83
Scgb2b18A0A087WPA9 Gm23366-201ENSMUST00000175022 89 ntBASIC32.65■■■□□ 2.82
Scgb2b18A0A087WPA9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.61■■■□□ 2.81
Scgb2b18A0A087WPA9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
Scgb2b18A0A087WPA9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Scgb2b18A0A087WPA9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Scgb2b18A0A087WPA9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.37■■■□□ 2.77
Scgb2b18A0A087WPA9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Scgb2b18A0A087WPA9 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.33■■■□□ 2.77
Scgb2b18A0A087WPA9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Scgb2b18A0A087WPA9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Scgb2b18A0A087WPA9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
Scgb2b18A0A087WPA9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.05■■■□□ 2.72
Scgb2b18A0A087WPA9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.04■■■□□ 2.72
Scgb2b18A0A087WPA9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
Scgb2b18A0A087WPA9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.89■■■□□ 2.7
Scgb2b18A0A087WPA9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Scgb2b18A0A087WPA9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Scgb2b18A0A087WPA9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Scgb2b18A0A087WPA9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
Scgb2b18A0A087WPA9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.55■■■□□ 2.64
Scgb2b18A0A087WPA9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Scgb2b18A0A087WPA9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Scgb2b18A0A087WPA9 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.5■■■□□ 2.63
Scgb2b18A0A087WPA9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Scgb2b18A0A087WPA9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Scgb2b18A0A087WPA9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Scgb2b18A0A087WPA9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
Scgb2b18A0A087WPA9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
Scgb2b18A0A087WPA9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Scgb2b18A0A087WPA9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
Scgb2b18A0A087WPA9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
Scgb2b18A0A087WPA9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Scgb2b18A0A087WPA9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
Scgb2b18A0A087WPA9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.19■■■□□ 2.58
Scgb2b18A0A087WPA9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Scgb2b18A0A087WPA9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Scgb2b18A0A087WPA9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Scgb2b18A0A087WPA9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Scgb2b18A0A087WPA9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.9■■■□□ 2.54
Scgb2b18A0A087WPA9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.88■■■□□ 2.53
Scgb2b18A0A087WPA9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Scgb2b18A0A087WPA9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Scgb2b18A0A087WPA9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Scgb2b18A0A087WPA9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Scgb2b18A0A087WPA9 Gm27325-201ENSMUST00000175467 74 ntBASIC30.76■■■□□ 2.51
Scgb2b18A0A087WPA9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Scgb2b18A0A087WPA9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Scgb2b18A0A087WPA9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Scgb2b18A0A087WPA9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Scgb2b18A0A087WPA9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
Scgb2b18A0A087WPA9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Scgb2b18A0A087WPA9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Scgb2b18A0A087WPA9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Scgb2b18A0A087WPA9 Gm25238-201ENSMUST00000174914 89 ntBASIC30.57■■■□□ 2.48
Scgb2b18A0A087WPA9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Scgb2b18A0A087WPA9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Scgb2b18A0A087WPA9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Scgb2b18A0A087WPA9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.56■■■□□ 2.48
Scgb2b18A0A087WPA9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
Scgb2b18A0A087WPA9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Scgb2b18A0A087WPA9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30.43■■■□□ 2.46
Scgb2b18A0A087WPA9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.38■■■□□ 2.45
Scgb2b18A0A087WPA9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Retrieved 100 of 76,532 protein–RNA pairs in 8.8 ms