RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 GSY1P23337 708 aa-0.13□□□□□ -2.43
snR38snR38 YIM1P28625 365 aa-0.13□□□□□ -2.43
snR38snR38 ARO2P28777 376 aaKnown RBP-0.13□□□□□ -2.43
snR38snR38 SHP1P34223 423 aa-0.13□□□□□ -2.43
snR38snR38 SEF1P34228 1148 aa-0.13□□□□□ -2.43
snR38snR38 RPF2P36160 344 aaKnown RBP-0.13□□□□□ -2.43
snR38snR38 AGP2P38090 596 aa-0.13□□□□□ -2.43
snR38snR38 PEA2P40091 420 aa-0.13□□□□□ -2.43
snR38snR38 YGR125WP53273 1036 aa-0.13□□□□□ -2.43
snR38snR38 ARP10Q04549 284 aa-0.13□□□□□ -2.43
snR38snR38 YPQ1Q12010 308 aa-0.13□□□□□ -2.43
snR38snR38 YCL021W-AQ96VH3 125 aa-0.13□□□□□ -2.43
snR38snR38 ERG1P32476 496 aaKnown RBP-0.14□□□□□ -2.43
snR38snR38 IME2P32581 645 aa-0.14□□□□□ -2.43
snR38snR38 YNK1P36010 153 aaKnown RBP-0.14□□□□□ -2.43
snR38snR38 LEU5P38702 357 aa-0.14□□□□□ -2.43
snR38snR38 SEC31P38968 1273 aaKnown RBP-0.14□□□□□ -2.43
snR38snR38 CDC1P40986 491 aa-0.14□□□□□ -2.43
snR38snR38 UBX6P47049 396 aa-0.14□□□□□ -2.43
snR38snR38 YGL082WP53155 381 aa-0.14□□□□□ -2.43
snR38snR38 RNH70P53331 553 aa-0.14□□□□□ -2.43
snR38snR38 EKI1Q03764 534 aa-0.14□□□□□ -2.43
snR38snR38 TMA64Q04600 565 aaKnown RBP-0.14□□□□□ -2.43
snR38snR38 HNT3Q08702 217 aa-0.14□□□□□ -2.43
snR38snR38 YLR049CQ12110 428 aa-0.14□□□□□ -2.43
snR38snR38 Q0010Q9ZZX9 128 aa-0.14□□□□□ -2.43
snR38snR38 RPS17AP02407 136 aaKnown RBP-0.15□□□□□ -2.43
snR38snR38 PHO8P11491 566 aa-0.15□□□□□ -2.43
snR38snR38 HMG2P12684 1045 aa-0.15□□□□□ -2.43
snR38snR38 CLN3P13365 580 aa-0.15□□□□□ -2.43
snR38snR38 RPS17BP14127 136 aaKnown RBP-0.15□□□□□ -2.43
snR38snR38 HSP26P15992 214 aaKnown RBP RIP-Chip data-0.15□□□□□ -2.43not detected
snR38snR38 GID7P25569 745 aa-0.15□□□□□ -2.43
snR38snR38 HEM3P28789 327 aa-0.15□□□□□ -2.43
snR38snR38 NDC1P32500 655 aa-0.15□□□□□ -2.43
snR38snR38 SIP1P32578 815 aa-0.15□□□□□ -2.43
snR38snR38 BET3P36149 193 aa-0.15□□□□□ -2.43
snR38snR38 SWD3P38123 315 aa-0.15□□□□□ -2.43
snR38snR38 HLJ1P48353 224 aa-0.15□□□□□ -2.43
snR38snR38 ALD6P54115 500 aaKnown RBP-0.15□□□□□ -2.43
snR38snR38 ATG21Q02887 496 aa-0.15□□□□□ -2.43
snR38snR38 VHS1Q03785 461 aa-0.15□□□□□ -2.43
snR38snR38 AIM32Q04689 311 aa-0.15□□□□□ -2.43
snR38snR38 RRN11Q04712 507 aa-0.15□□□□□ -2.43
snR38snR38 FPR4Q06205 392 aaPredicted RBP-0.15□□□□□ -2.43
snR38snR38 WTM1Q12363 437 aaKnown RBP-0.15□□□□□ -2.43
snR38snR38 YOL098CQ12496 1037 aa-0.15□□□□□ -2.43
snR38snR38 TEF1P02994 458 aaKnown RBP-0.16□□□□□ -2.44
snR38snR38 MRP2P10663 115 aaPredicted RBP-0.16□□□□□ -2.44
snR38snR38 PAH1P32567 862 aa-0.16□□□□□ -2.44
snR38snR38 FMT1P32785 401 aa-0.16□□□□□ -2.44
snR38snR38 PTR2P32901 601 aa-0.16□□□□□ -2.44
snR38snR38 ERG7P38604 731 aa-0.16□□□□□ -2.44
snR38snR38 BUD16P39988 312 aa-0.16□□□□□ -2.44
snR38snR38 RGI2P40188 164 aa-0.16□□□□□ -2.44
snR38snR38 TMA108P40462 946 aa-0.16□□□□□ -2.44
snR38snR38 RPR2P40571 144 aa-0.16□□□□□ -2.44
snR38snR38 FET5P43561 622 aa-0.16□□□□□ -2.44
snR38snR38 YRB30P53107 440 aaPredicted RBP-0.16□□□□□ -2.44
snR38snR38 YPR003CP53394 754 aa-0.16□□□□□ -2.44
snR38snR38 SQS1P53866 767 aaKnown RBP-0.16□□□□□ -2.44
snR38snR38 IRC15Q02733 499 aa-0.16□□□□□ -2.44
snR38snR38 RPM2Q02773 1202 aa-0.16□□□□□ -2.44
snR38snR38 ECM7Q06200 448 aa-0.16□□□□□ -2.44
snR38snR38 INP53Q12271 1107 aa-0.16□□□□□ -2.44
snR38snR38 GPA1P08539 472 aa-0.17□□□□□ -2.44
snR38snR38 RPL20AP0CX23 172 aaKnown RBP-0.17□□□□□ -2.44
snR38snR38 RPL20BP0CX24 172 aaPredicted RBP-0.17□□□□□ -2.44
snR38snR38 SPO7P18410 259 aa-0.17□□□□□ -2.44
snR38snR38 SAG1P20840 650 aa-0.17□□□□□ -2.44
snR38snR38 MRC1P25588 1096 aa-0.17□□□□□ -2.44
snR38snR38 SPC110P32380 944 aa-0.17□□□□□ -2.44
snR38snR38 SAC6P32599 642 aaKnown RBP-0.17□□□□□ -2.44
snR38snR38 VPS8P39702 1274 aa-0.17□□□□□ -2.44
snR38snR38 PFS2P42841 465 aaKnown RBP-0.17□□□□□ -2.44
snR38snR38 SNG1P46950 547 aa-0.17□□□□□ -2.44
snR38snR38 YDL183CP48569 320 aa-0.17□□□□□ -2.44
snR38snR38 MSO1P53604 210 aaKnown RBP-0.17□□□□□ -2.44
snR38snR38 CDC9P04819 755 aa-0.18□□□□□ -2.44
snR38snR38 NAM2P11325 894 aa-0.18□□□□□ -2.44
snR38snR38 GRX1P25373 110 aaKnown RBP-0.18□□□□□ -2.44
snR38snR38 TUL1P36096 758 aa-0.18□□□□□ -2.44
snR38snR38 STV1P37296 890 aa-0.18□□□□□ -2.44
snR38snR38 ARA1P38115 344 aa-0.18□□□□□ -2.44
snR38snR38 VAC8P39968 578 aa-0.18□□□□□ -2.44
snR38snR38 RPT2P40327 437 aaKnown RBP-0.18□□□□□ -2.44
snR38snR38 SGF73P53165 657 aa-0.18□□□□□ -2.44
snR38snR38 BSC5P53755 489 aa-0.18□□□□□ -2.44
snR38snR38 ELP3Q02908 557 aaKnown RBP-0.18□□□□□ -2.44
snR38snR38 PBA1Q05778 276 aa-0.18□□□□□ -2.44
snR38snR38 TMS1Q12116 473 aa-0.18□□□□□ -2.44
snR38snR38 ARP6Q12509 438 aa-0.18□□□□□ -2.44
snR38snR38 YER078W-AQ3E7A2 54 aa-0.18□□□□□ -2.44
snR38snR38 TY1B-AO13527 1196 aaKnown RBP-0.19□□□□□ -2.44
snR38snR38 SUI3P09064 285 aaKnown RBP-0.19□□□□□ -2.44
snR38snR38 SWI6P09959 803 aa-0.19□□□□□ -2.44
snR38snR38 RPB8P20436 146 aa-0.19□□□□□ -2.44
snR38snR38 AEP2P22136 580 aa-0.19□□□□□ -2.44
snR38snR38 RER1P25560 188 aa-0.19□□□□□ -2.44
snR38snR38 FUN19P28003 413 aaPredicted RBP-0.19□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms