RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN8YOR261C MRPL13Q02204 264 aa4.77□□□□□ -1.65
RPN8YOR261C BLS1Q06071 122 aa4.77□□□□□ -1.65
RPN8YOR261C TFC6Q06339 672 aa4.77□□□□□ -1.65
RPN8YOR261C PFA4Q12006 378 aa4.77□□□□□ -1.65
RPN8YOR261C ATP2P00830 511 aaKnown RBP4.76□□□□□ -1.65
RPN8YOR261C UBC1P21734 215 aaKnown RBP4.76□□□□□ -1.65
RPN8YOR261C CSL4P53859 292 aaPredicted RBP4.76□□□□□ -1.65
RPN8YOR261C SWT1Q12104 458 aa4.76□□□□□ -1.65
RPN8YOR261C PCD1Q12524 340 aa4.76□□□□□ -1.65
RPN8YOR261C YPR089WO13585 888 aa4.75□□□□□ -1.65
RPN8YOR261C PTH2P34222 208 aa4.75□□□□□ -1.65
RPN8YOR261C SEC5P89102 971 aa4.75□□□□□ -1.65
RPN8YOR261C COX17Q12287 69 aa4.75□□□□□ -1.65
RPN8YOR261C CNA1P23287 553 aa4.74□□□□□ -1.65
RPN8YOR261C NUP120P35729 1037 aa4.74□□□□□ -1.65
RPN8YOR261C MRPL36P36531 177 aa4.74□□□□□ -1.65
RPN8YOR261C IFA38P38286 347 aa4.74□□□□□ -1.65
RPN8YOR261C FLO5P38894 1075 aa4.74□□□□□ -1.65
RPN8YOR261C TPA1P40032 644 aaKnown RBP4.74□□□□□ -1.65
RPN8YOR261C PCI8P40512 444 aa4.74□□□□□ -1.65
RPN8YOR261C RPL15BP54780 204 aaPredicted RBP4.74□□□□□ -1.65
RPN8YOR261C PDR8Q06149 701 aa4.74□□□□□ -1.65
RPN8YOR261C SPO16P17122 198 aa4.73□□□□□ -1.65
RPN8YOR261C SRP54P20424 541 aaKnown RBP4.73□□□□□ -1.65
RPN8YOR261C MSS51P32335 436 aa4.73□□□□□ -1.65
RPN8YOR261C XRS2P33301 854 aa4.73□□□□□ -1.65
RPN8YOR261C ASK1P35734 292 aa4.73□□□□□ -1.65
RPN8YOR261C OCT1P35999 772 aa4.73□□□□□ -1.65
RPN8YOR261C TOM71P38825 639 aaKnown RBP4.73□□□□□ -1.65
RPN8YOR261C VPS41P38959 992 aa4.73□□□□□ -1.65
RPN8YOR261C EAF7P53911 425 aaKnown RBP4.73□□□□□ -1.65
RPN8YOR261C ATG16Q03818 150 aa4.73□□□□□ -1.65
RPN8YOR261C HER1Q12276 1246 aa4.73□□□□□ -1.65
RPN8YOR261C RRI1Q12468 440 aa4.73□□□□□ -1.65
RPN8YOR261C AIM17P23180 465 aaKnown RBP4.72□□□□□ -1.65
RPN8YOR261C RPT3P33298 428 aaKnown RBP4.72□□□□□ -1.65
RPN8YOR261C VPS24P36095 224 aaKnown RBP4.72□□□□□ -1.65
RPN8YOR261C SPC97P38863 823 aa4.72□□□□□ -1.65
RPN8YOR261C YMR124WP39523 943 aaKnown RBP4.72□□□□□ -1.65
RPN8YOR261C YIL161WP40449 235 aaKnown RBP4.72□□□□□ -1.65
RPN8YOR261C SAP185P40856 1058 aa4.72□□□□□ -1.65
RPN8YOR261C SMK1P41808 388 aa4.72□□□□□ -1.65
RPN8YOR261C BNA1P47096 177 aa4.72□□□□□ -1.65
RPN8YOR261C COG1P53079 417 aa4.72□□□□□ -1.65
RPN8YOR261C DCP2P53550 970 aaKnown RBP4.72□□□□□ -1.65
RPN8YOR261C VTC3Q02725 835 aa4.72□□□□□ -1.65
RPN8YOR261C YPL068CQ02749 293 aa4.72□□□□□ -1.65
RPN8YOR261C PIG1Q06216 648 aa4.72□□□□□ -1.65
RPN8YOR261C PSR2Q07949 397 aa4.72□□□□□ -1.65
RPN8YOR261C CIR2Q08822 631 aa4.72□□□□□ -1.65
RPN8YOR261C ATX2Q12067 313 aa4.72□□□□□ -1.65
RPN8YOR261C TY2A-LR1P0C2J4 438 aa4.71□□□□□ -1.66
RPN8YOR261C TY2A-FP0CX61 438 aa4.71□□□□□ -1.66
RPN8YOR261C TY2A-GR2P0CX62 438 aa4.71□□□□□ -1.66
RPN8YOR261C YCP4P25349 247 aaKnown RBP4.71□□□□□ -1.66
RPN8YOR261C TY2A-CP25383 438 aa4.71□□□□□ -1.66
RPN8YOR261C PWP2P25635 923 aaKnown RBP4.71□□□□□ -1.66
RPN8YOR261C MGM1P32266 881 aa4.71□□□□□ -1.66
RPN8YOR261C ASG1P40467 964 aa4.71□□□□□ -1.66
RPN8YOR261C CTF18P49956 741 aa4.71□□□□□ -1.66
RPN8YOR261C RRT6P53117 311 aaPredicted RBP4.71□□□□□ -1.66
RPN8YOR261C RTS3P53289 263 aa4.71□□□□□ -1.66
RPN8YOR261C SCW4P53334 386 aaKnown RBP4.71□□□□□ -1.66
RPN8YOR261C MPS1P54199 764 aa4.71□□□□□ -1.66
RPN8YOR261C TY2A-DR2Q03483 438 aa4.71□□□□□ -1.66
RPN8YOR261C MRPL1Q04599 285 aa4.71□□□□□ -1.66
RPN8YOR261C SWA2Q06677 668 aa4.71□□□□□ -1.66
RPN8YOR261C CSR1Q06705 408 aaKnown RBP4.71□□□□□ -1.66
RPN8YOR261C TMA16Q08687 178 aa4.71□□□□□ -1.66
RPN8YOR261C TY2A-BQ12260 438 aa4.71□□□□□ -1.66
RPN8YOR261C TY2A-OR2Q12293 438 aa4.71□□□□□ -1.66
RPN8YOR261C TY2A-DR1Q12392 438 aa4.71□□□□□ -1.66
RPN8YOR261C TY2A-OR1Q12439 438 aa4.71□□□□□ -1.66
RPN8YOR261C TY2A-DR3Q99303 438 aa4.71□□□□□ -1.66
RPN8YOR261C TPK1P06244 397 aa4.7□□□□□ -1.66
RPN8YOR261C SUI3P09064 285 aaKnown RBP4.7□□□□□ -1.66
RPN8YOR261C MRP2P10663 115 aaPredicted RBP4.7□□□□□ -1.66
RPN8YOR261C YCR006CP25350 157 aa4.7□□□□□ -1.66
RPN8YOR261C UBP13P38187 747 aa4.7□□□□□ -1.66
RPN8YOR261C ASE1P50275 885 aa4.7□□□□□ -1.66
RPN8YOR261C PSP1P50896 841 aaKnown RBP4.7□□□□□ -1.66
RPN8YOR261C YGR021WP53212 290 aa4.7□□□□□ -1.66
RPN8YOR261C ECM22Q05958 814 aaPredicted RBP4.7□□□□□ -1.66
RPN8YOR261C MCH4Q08268 501 aa4.7□□□□□ -1.66
RPN8YOR261C YER145C-AA0A023PYF4 145 aa4.69□□□□□ -1.66
RPN8YOR261C ADE17P38009 592 aaKnown RBP4.69□□□□□ -1.66
RPN8YOR261C VMS1Q04311 632 aaKnown RBP4.69□□□□□ -1.66
RPN8YOR261C CRN1Q06440 651 aa4.69□□□□□ -1.66
RPN8YOR261C FRE3Q08905 711 aa4.69□□□□□ -1.66
RPN8YOR261C GPA1P08539 472 aa4.68□□□□□ -1.66
RPN8YOR261C MRS6P32864 603 aaKnown RBP4.68□□□□□ -1.66
RPN8YOR261C SWP82P43554 623 aa4.68□□□□□ -1.66
RPN8YOR261C YLR455WQ06188 304 aa4.68□□□□□ -1.66
RPN8YOR261C TRM8Q12009 286 aa4.68□□□□□ -1.66
RPN8YOR261C SNF1P06782 633 aaKnown RBP4.67□□□□□ -1.66
RPN8YOR261C CHO1P08456 276 aa4.67□□□□□ -1.66
RPN8YOR261C SRB5P32585 307 aa4.67□□□□□ -1.66
RPN8YOR261C NTR2P36118 322 aaPredicted RBP4.67□□□□□ -1.66
RPN8YOR261C AAP1P37898 856 aaKnown RBP4.67□□□□□ -1.66
RPN8YOR261C PSY4P38193 441 aa4.67□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms