RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W ERS1P17261 260 aa2.04□□□□□ -2.08
HER1YOR227W DBF4P32325 704 aa2.04□□□□□ -2.08
HER1YOR227W RPD3P32561 433 aa2.04□□□□□ -2.08
HER1YOR227W PET127P32606 800 aa2.04□□□□□ -2.08
HER1YOR227W ASH1P34233 588 aa2.04□□□□□ -2.08
HER1YOR227W WHI3P34761 661 aaKnown RBP2.04□□□□□ -2.08
HER1YOR227W CST26P38226 397 aa2.04□□□□□ -2.08
HER1YOR227W ERG7P38604 731 aa2.04□□□□□ -2.08
HER1YOR227W OSH3P38713 996 aaKnown RBP2.04□□□□□ -2.08
HER1YOR227W CTM1P38818 585 aa2.04□□□□□ -2.08
HER1YOR227W FLC2P39719 783 aa2.04□□□□□ -2.08
HER1YOR227W YER158CP40095 573 aa2.04□□□□□ -2.08
HER1YOR227W YJR061WP40355 935 aa2.04□□□□□ -2.08
HER1YOR227W BUD8P41698 603 aa2.04□□□□□ -2.08
HER1YOR227W ROK1P45818 564 aaPredicted RBP2.04□□□□□ -2.08
HER1YOR227W GCV1P48015 400 aa2.04□□□□□ -2.08
HER1YOR227W PSP2P50109 593 aaKnown RBP2.04□□□□□ -2.08
HER1YOR227W SHE10P53075 577 aa2.04□□□□□ -2.08
HER1YOR227W TAM41P53230 385 aa2.04□□□□□ -2.08
HER1YOR227W NAM8Q00539 523 aaKnown RBP2.04□□□□□ -2.08
HER1YOR227W ADY4Q05955 493 aa2.04□□□□□ -2.08
HER1YOR227W YDL144CQ07589 356 aa2.04□□□□□ -2.08
HER1YOR227W MLH2Q07980 695 aa2.04□□□□□ -2.08
HER1YOR227W NIP1P32497 812 aaKnown RBP2.03□□□□□ -2.08
HER1YOR227W RPN10P38886 268 aaKnown RBP2.03□□□□□ -2.08
HER1YOR227W YAR028WP39548 234 aa2.03□□□□□ -2.08
HER1YOR227W RPN3P40016 523 aaKnown RBP2.03□□□□□ -2.08
HER1YOR227W RGI2P40188 164 aa2.03□□□□□ -2.08
HER1YOR227W ARC1P46672 376 aaKnown RBP2.03□□□□□ -2.08
HER1YOR227W RAD30Q04049 632 aa2.03□□□□□ -2.08
HER1YOR227W RPN5Q12250 445 aaKnown RBP2.03□□□□□ -2.08
HER1YOR227W VCX1Q99385 411 aa2.03□□□□□ -2.08
HER1YOR227W PDR18P53756 1333 aa2.03□□□□□ -2.08
HER1YOR227W LAT1P12695 482 aaKnown RBP2.03□□□□□ -2.08
HER1YOR227W HNM1P19807 563 aa2.03□□□□□ -2.08
HER1YOR227W PRP22P24384 1145 aaKnown RBP2.03□□□□□ -2.08
HER1YOR227W RPS7AP26786 190 aaKnown RBP2.03□□□□□ -2.08
HER1YOR227W YBL028CP38202 106 aa2.03□□□□□ -2.08
HER1YOR227W YHR097CP38809 366 aaKnown RBP2.03□□□□□ -2.08
HER1YOR227W YEL025CP39991 1188 aa2.03□□□□□ -2.08
HER1YOR227W LAM5P43560 674 aa2.03□□□□□ -2.08
HER1YOR227W HST1P53685 503 aa2.03□□□□□ -2.08
HER1YOR227W SQS1P53866 767 aaKnown RBP2.03□□□□□ -2.08
HER1YOR227W HED1Q03937 162 aa2.03□□□□□ -2.08
HER1YOR227W SSL1Q04673 461 aaPredicted RBP2.03□□□□□ -2.08
HER1YOR227W SOV1Q04748 898 aa2.03□□□□□ -2.08
HER1YOR227W TRI1Q05024 226 aa2.03□□□□□ -2.08
HER1YOR227W RBS1Q05672 457 aaKnown RBP2.03□□□□□ -2.08
HER1YOR227W RGC1Q06108 1083 aaKnown RBP2.03□□□□□ -2.08
HER1YOR227W DBP9Q06218 594 aaKnown RBP2.03□□□□□ -2.08
HER1YOR227W YCG1Q06680 1035 aa2.03□□□□□ -2.08
HER1YOR227W LEU9Q12166 604 aaKnown RBP2.03□□□□□ -2.08
HER1YOR227W MRPL25P23369 157 aa2.03□□□□□ -2.09
HER1YOR227W YJU2P28320 278 aaPredicted RBP2.03□□□□□ -2.09
HER1YOR227W YEL043WP32618 956 aa2.03□□□□□ -2.09
HER1YOR227W COY1P34237 679 aa2.03□□□□□ -2.09
HER1YOR227W SWH1P35845 1188 aa2.03□□□□□ -2.09
HER1YOR227W SDS22P36047 338 aa2.03□□□□□ -2.09
HER1YOR227W AHP1P38013 176 aaKnown RBP2.03□□□□□ -2.09
HER1YOR227W POL12P38121 705 aaPredicted RBP2.03□□□□□ -2.09
HER1YOR227W REI1P38344 393 aaPredicted RBP2.03□□□□□ -2.09
HER1YOR227W RFC3P38629 340 aa2.03□□□□□ -2.09
HER1YOR227W GDI1P39958 451 aaKnown RBP2.03□□□□□ -2.09
HER1YOR227W KHA1P40309 873 aa2.03□□□□□ -2.09
HER1YOR227W PKP1P40530 394 aa2.03□□□□□ -2.09
HER1YOR227W PRM2P40534 656 aa2.03□□□□□ -2.09
HER1YOR227W BRE2P43132 505 aa2.03□□□□□ -2.09
HER1YOR227W ENP2P48234 707 aaKnown RBP2.03□□□□□ -2.09
HER1YOR227W MNP1P53163 194 aaPredicted RBP2.03□□□□□ -2.09
HER1YOR227W SPO1P53541 631 aa2.03□□□□□ -2.09
HER1YOR227W CIK1Q01649 594 aa2.03□□□□□ -2.09
HER1YOR227W FMP30Q02883 468 aa2.03□□□□□ -2.09
HER1YOR227W MUB1Q03162 620 aa2.03□□□□□ -2.09
HER1YOR227W ABZ2Q03266 374 aa2.03□□□□□ -2.09
HER1YOR227W HMO1Q03973 246 aaKnown RBP2.03□□□□□ -2.09
HER1YOR227W NOP6Q07623 225 aaKnown RBP2.03□□□□□ -2.09
HER1YOR227W UAF30Q08747 228 aa2.03□□□□□ -2.09
HER1YOR227W YOR022CQ12204 715 aa2.03□□□□□ -2.09
HER1YOR227W COX17Q12287 69 aa2.03□□□□□ -2.09
HER1YOR227W RIB2Q12362 591 aaKnown RBP2.03□□□□□ -2.09
HER1YOR227W SES1P07284 462 aaKnown RBP2.02□□□□□ -2.09
HER1YOR227W TY2A-LR1P0C2J4 438 aa2.02□□□□□ -2.09
HER1YOR227W RPL1AP0CX43 217 aaKnown RBP2.02□□□□□ -2.09
HER1YOR227W RPL1BP0CX44 217 aaKnown RBP2.02□□□□□ -2.09
HER1YOR227W TY2A-FP0CX61 438 aa2.02□□□□□ -2.09
HER1YOR227W TY2A-GR2P0CX62 438 aa2.02□□□□□ -2.09
HER1YOR227W STE12P13574 688 aa2.02□□□□□ -2.09
HER1YOR227W CBS1P14066 229 aa2.02□□□□□ -2.09
HER1YOR227W KIN82P25341 720 aa2.02□□□□□ -2.09
HER1YOR227W TY2A-CP25383 438 aa2.02□□□□□ -2.09
HER1YOR227W PRE4P30657 266 aa2.02□□□□□ -2.09
HER1YOR227W CRM1P30822 1084 aaKnown RBP2.02□□□□□ -2.09
HER1YOR227W DGR2P32330 852 aa2.02□□□□□ -2.09
HER1YOR227W SRP101P32916 621 aa2.02□□□□□ -2.09
HER1YOR227W EHT1P38295 451 aa2.02□□□□□ -2.09
HER1YOR227W MUP3P38734 546 aa2.02□□□□□ -2.09
HER1YOR227W MPT5P39016 859 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
HER1YOR227W LSB1P53281 241 aa2.02□□□□□ -2.09
HER1YOR227W NOG2P53742 486 aaKnown RBP2.02□□□□□ -2.09
HER1YOR227W TY2A-DR2Q03483 438 aa2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 41.5 ms