RNA–Protein interactions for RNA: YNL032W

SIW14, Transcript of Tyrosine phosphatase involved in actin organization and endocytosis, yeast

Gene SIW14, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIW14	YNL032W	PUT4	P15380	627 aa		4.2	□□□□□ -1.74
SIW14	YNL032W	CBF1	P17106	351 aa		4.2	□□□□□ -1.74
SIW14	YNL032W	EXO70	P19658	623 aa		4.2	□□□□□ -1.74
SIW14	YNL032W	RNR1	P21524	888 aa	Known RBP	4.2	□□□□□ -1.74
SIW14	YNL032W	TPS2	P31688	896 aa	Known RBP	4.2	□□□□□ -1.74
SIW14	YNL032W	SKG6	P32900	734 aa	Predicted RBP	4.2	□□□□□ -1.74
SIW14	YNL032W	SLA2	P33338	968 aa		4.2	□□□□□ -1.74
SIW14	YNL032W	MRP8	P35719	219 aa		4.2	□□□□□ -1.74
SIW14	YNL032W	MRX3	P38172	270 aa		4.2	□□□□□ -1.74
SIW14	YNL032W	MMS4	P38257	691 aa		4.2	□□□□□ -1.74
SIW14	YNL032W	SWC5	P38326	303 aa		4.2	□□□□□ -1.74
SIW14	YNL032W	SIC1	P38634	284 aa		4.2	□□□□□ -1.74
SIW14	YNL032W	NDT80	P38830	627 aa		4.2	□□□□□ -1.74
SIW14	YNL032W	MBP1	P39678	833 aa		4.2	□□□□□ -1.74
SIW14	YNL032W	YEL025C	P39991	1188 aa		4.2	□□□□□ -1.74
SIW14	YNL032W	ULP2	P40537	1034 aa	Predicted RBP	4.2	□□□□□ -1.74
SIW14	YNL032W	SNZ3	P43545	298 aa		4.2	□□□□□ -1.74
SIW14	YNL032W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	RIP-Chip
SIW14	YNL032W	ASN1	P49089	572 aa	Known RBP	4.2	□□□□□ -1.74
SIW14	YNL032W	CUL3	P53202	744 aa		4.2	□□□□□ -1.74
SIW14	YNL032W	YGR125W	P53273	1036 aa		4.2	□□□□□ -1.74
SIW14	YNL032W	NOG2	P53742	486 aa	Known RBP	4.2	□□□□□ -1.74
SIW14	YNL032W	SNZ2	P53824	298 aa		4.2	□□□□□ -1.74
SIW14	YNL032W	YNL040W	P53960	456 aa	Predicted RBP	4.2	□□□□□ -1.74
SIW14	YNL032W	TRM44	Q02648	567 aa	Known RBP	4.2	□□□□□ -1.74
SIW14	YNL032W	COQ9	Q05779	260 aa		4.2	□□□□□ -1.74
SIW14	YNL032W	SLX4	Q12098	748 aa		4.2	□□□□□ -1.74
SIW14	YNL032W	SPE4	Q12455	300 aa		4.2	□□□□□ -1.74
SIW14	YNL032W	NOT5	Q12514	560 aa	Predicted RBP	4.2	□□□□□ -1.74
SIW14	YNL032W	PCD1	Q12524	340 aa		4.2	□□□□□ -1.74
SIW14	YNL032W	ECM3	Q99252	613 aa		4.2	□□□□□ -1.74
SIW14	YNL032W	BI3	Q9ZZW7	517 aa		4.2	□□□□□ -1.74
SIW14	YNL032W	GSC2	P40989	1895 aa		4.2	□□□□□ -1.74
SIW14	YNL032W	SNA3	P14359	133 aa		4.19	□□□□□ -1.74
SIW14	YNL032W	IME1	P21190	360 aa		4.19	□□□□□ -1.74
SIW14	YNL032W	TKL1	P23254	680 aa	Known RBP	4.19	□□□□□ -1.74
SIW14	YNL032W	EFT1	P32324	842 aa	Known RBP	4.19	□□□□□ -1.74
SIW14	YNL032W	VPH2	P32341	215 aa		4.19	□□□□□ -1.74
SIW14	YNL032W	TMT1	P32643	299 aa		4.19	□□□□□ -1.74
SIW14	YNL032W	KDX1	P36005	433 aa		4.19	□□□□□ -1.74
SIW14	YNL032W	STV1	P37296	890 aa		4.19	□□□□□ -1.74
SIW14	YNL032W	NOP4	P37838	685 aa	Known RBP	4.19	□□□□□ -1.74
SIW14	YNL032W	DUG2	P38149	878 aa		4.19	□□□□□ -1.74
SIW14	YNL032W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
SIW14	YNL032W	RFC3	P38629	340 aa		4.19	□□□□□ -1.74
SIW14	YNL032W	ERP2	P39704	215 aa		4.19	□□□□□ -1.74
SIW14	YNL032W	TMN3	P40071	706 aa		4.19	□□□□□ -1.74
SIW14	YNL032W	GVP36	P40531	326 aa	Known RBP	4.19	□□□□□ -1.74
SIW14	YNL032W	IRR1	P40541	1150 aa		4.19	□□□□□ -1.74
SIW14	YNL032W	MND2	P40577	368 aa		4.19	□□□□□ -1.74
SIW14	YNL032W	NET1	P47035	1189 aa		4.19	□□□□□ -1.74
SIW14	YNL032W	EAF6	P47128	113 aa		4.19	□□□□□ -1.74
SIW14	YNL032W	YLR224W	Q05947	369 aa		4.19	□□□□□ -1.74
SIW14	YNL032W	UBX5	Q06682	500 aa		4.19	□□□□□ -1.74
SIW14	YNL032W	FMP25	Q08023	583 aa		4.19	□□□□□ -1.74
SIW14	YNL032W	SVS1	Q12254	260 aa		4.19	□□□□□ -1.74
SIW14	YNL032W	RRD2	Q12461	358 aa		4.19	□□□□□ -1.74
SIW14	YNL032W	CMD1	P06787	147 aa	Known RBP	4.18	□□□□□ -1.74
SIW14	YNL032W	CBP1	P07252	654 aa		4.18	□□□□□ -1.74
SIW14	YNL032W	HPR1	P17629	752 aa	Known RBP	4.18	□□□□□ -1.74
SIW14	YNL032W	SLY1	P22213	666 aa		4.18	□□□□□ -1.74
SIW14	YNL032W	TRX1	P22217	103 aa	Known RBP	4.18	□□□□□ -1.74
SIW14	YNL032W	KIN82	P25341	720 aa		4.18	□□□□□ -1.74
SIW14	YNL032W	MGT1	P26188	188 aa		4.18	□□□□□ -1.74
SIW14	YNL032W	URA7	P28274	579 aa	Known RBP	4.18	□□□□□ -1.74
SIW14	YNL032W	DCG1	P32460	244 aa		4.18	□□□□□ -1.74
SIW14	YNL032W	SEC6	P32844	805 aa		4.18	□□□□□ -1.74
SIW14	YNL032W	MRP4	P32902	394 aa		4.18	□□□□□ -1.74
SIW14	YNL032W	DEF1	P35732	738 aa	Known RBP	4.18	□□□□□ -1.74
SIW14	YNL032W	MSS4	P38994	779 aa		4.18	□□□□□ -1.74
SIW14	YNL032W	BEM4	P39011	633 aa		4.18	□□□□□ -1.74
SIW14	YNL032W	FRT2	P39734	528 aa		4.18	□□□□□ -1.74
SIW14	YNL032W	SSP120	P39931	234 aa	Known RBP	4.18	□□□□□ -1.74
SIW14	YNL032W	SCC4	P40090	624 aa		4.18	□□□□□ -1.74
SIW14	YNL032W	DIM1	P41819	318 aa	Known RBP	4.18	□□□□□ -1.74
SIW14	YNL032W	SAD1	P43589	448 aa		4.18	□□□□□ -1.74
SIW14	YNL032W	ERP6	P53198	216 aa		4.18	□□□□□ -1.74
SIW14	YNL032W	VPS62	P53285	467 aa		4.18	□□□□□ -1.74
SIW14	YNL032W	PBP1	P53297	722 aa	Known RBP	4.18	□□□□□ -1.74
SIW14	YNL032W	YPR003C	P53394	754 aa		4.18	□□□□□ -1.74
SIW14	YNL032W	YNL146W	P53906	100 aa		4.18	□□□□□ -1.74
SIW14	YNL032W	LGE1	Q02796	332 aa	Known RBP	4.18	□□□□□ -1.74
SIW14	YNL032W	YAP6	Q03935	383 aa		4.18	□□□□□ -1.74
SIW14	YNL032W	PSR1	Q07800	427 aa		4.18	□□□□□ -1.74
SIW14	YNL032W	APC5	Q08683	685 aa		4.18	□□□□□ -1.74
SIW14	YNL032W	OSW1	Q08692	278 aa		4.18	□□□□□ -1.74
SIW14	YNL032W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
SIW14	YNL032W	HRT3	Q12347	344 aa		4.18	□□□□□ -1.74
SIW14	YNL032W	OCA6	Q12454	224 aa		4.18	□□□□□ -1.74
SIW14	YNL032W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
SIW14	YNL032W	RAD10	P06838	210 aa		4.17	□□□□□ -1.74
SIW14	YNL032W	SSC1	P0CS90	654 aa	Known RBP	4.17	□□□□□ -1.74
SIW14	YNL032W	SAM1	P10659	382 aa	Known RBP	4.17	□□□□□ -1.74
SIW14	YNL032W	CDC24	P11433	854 aa	Predicted RBP	4.17	□□□□□ -1.74
SIW14	YNL032W	VMA2	P16140	517 aa	Known RBP	4.17	□□□□□ -1.74
SIW14	YNL032W	URA4	P20051	364 aa		4.17	□□□□□ -1.74
SIW14	YNL032W	REC107	P21651	314 aa		4.17	□□□□□ -1.74
SIW14	YNL032W	SPS22	P25380	463 aa		4.17	□□□□□ -1.74
SIW14	YNL032W	RPC19	P28000	142 aa	Known RBP	4.17	□□□□□ -1.74
SIW14	YNL032W	SEC1	P30619	724 aa	Known RBP	4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 51.8 ms