RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C PHO23P50947 330 aa0.95□□□□□ -2.26
RKR1YMR247C PIP2P52960 996 aa0.95□□□□□ -2.26
RKR1YMR247C MNT2P53059 558 aa0.95□□□□□ -2.26
RKR1YMR247C YIP4P53093 235 aa0.95□□□□□ -2.26
RKR1YMR247C STP1Q00947 519 aa0.95□□□□□ -2.26
RKR1YMR247C PDS5Q04264 1277 aa0.95□□□□□ -2.26
RKR1YMR247C ERP1Q05359 219 aaKnown RBP0.95□□□□□ -2.26
RKR1YMR247C BLS1Q06071 122 aa0.95□□□□□ -2.26
RKR1YMR247C LAS17Q12446 633 aa0.95□□□□□ -2.26
RKR1YMR247C AHA1Q12449 350 aaKnown RBP0.95□□□□□ -2.26
RKR1YMR247C TY1B-GR3Q12316 1755 aa0.95□□□□□ -2.26
RKR1YMR247C TY1B-ORQ92393 1755 aa0.95□□□□□ -2.26
RKR1YMR247C GDB1Q06625 1536 aa0.94□□□□□ -2.26
RKR1YMR247C HIR3P47171 1648 aa0.94□□□□□ -2.26
RKR1YMR247C YEL076C-AP0CX16 216 aa0.94□□□□□ -2.26
RKR1YMR247C YLR464WP0CX17 216 aa0.94□□□□□ -2.26
RKR1YMR247C UBC1P21734 215 aaKnown RBP0.94□□□□□ -2.26
RKR1YMR247C MBR1P23493 339 aa0.94□□□□□ -2.26
RKR1YMR247C YCR007CP25354 239 aa0.94□□□□□ -2.26
RKR1YMR247C PTC6P25646 442 aa0.94□□□□□ -2.26
RKR1YMR247C MSH1P25846 959 aa0.94□□□□□ -2.26
RKR1YMR247C RPD3P32561 433 aa0.94□□□□□ -2.26
RKR1YMR247C TEF4P36008 412 aaKnown RBP0.94□□□□□ -2.26
RKR1YMR247C SNU114P36048 1008 aaKnown RBP0.94□□□□□ -2.26
RKR1YMR247C PMC1P38929 1173 aaPredicted RBP0.94□□□□□ -2.26
RKR1YMR247C YEL076CP39971 216 aa0.94□□□□□ -2.26
RKR1YMR247C NUG1P40010 520 aaKnown RBP0.94□□□□□ -2.26
RKR1YMR247C YAT2P40017 923 aa0.94□□□□□ -2.26
RKR1YMR247C GET2P40056 285 aa0.94□□□□□ -2.26
RKR1YMR247C YJL070CP40361 888 aa0.94□□□□□ -2.26
RKR1YMR247C RIC1P40395 1056 aa0.94□□□□□ -2.26
RKR1YMR247C CTF18P49956 741 aa0.94□□□□□ -2.26
RKR1YMR247C MTL1P53214 551 aa0.94□□□□□ -2.26
RKR1YMR247C COX18P53239 316 aa0.94□□□□□ -2.26
RKR1YMR247C ALF1P53904 254 aa0.94□□□□□ -2.26
RKR1YMR247C COG6P53959 839 aa0.94□□□□□ -2.26
RKR1YMR247C MCP2Q06567 569 aa0.94□□□□□ -2.26
RKR1YMR247C NGL1Q08213 363 aaKnown RBP0.94□□□□□ -2.26
RKR1YMR247C USV1Q12132 391 aa0.94□□□□□ -2.26
RKR1YMR247C PUF2Q12221 1075 aaKnown RBP RIP-Chip data0.94□□□□□ -2.26 RIP-Chip
RKR1YMR247C LSP1Q12230 341 aaKnown RBP0.94□□□□□ -2.26
RKR1YMR247C CRC1Q12289 327 aa0.94□□□□□ -2.26
RKR1YMR247C ADR1P07248 1323 aa0.94□□□□□ -2.26
RKR1YMR247C ILV2P07342 687 aaKnown RBP0.94□□□□□ -2.26
RKR1YMR247C PRP16P15938 1071 aaPredicted RBP0.94□□□□□ -2.26
RKR1YMR247C APN1P22936 367 aa0.94□□□□□ -2.26
RKR1YMR247C MIH1P23748 554 aa0.94□□□□□ -2.26
RKR1YMR247C SPS22P25380 463 aa0.94□□□□□ -2.26
RKR1YMR247C GID7P25569 745 aa0.94□□□□□ -2.26
RKR1YMR247C CBF2P32504 956 aa0.94□□□□□ -2.26
RKR1YMR247C SDH3P33421 198 aa0.94□□□□□ -2.26
RKR1YMR247C YKL023WP36103 277 aaKnown RBP0.94□□□□□ -2.26
RKR1YMR247C GRX7P38068 203 aa0.94□□□□□ -2.26
RKR1YMR247C UBP13P38187 747 aa0.94□□□□□ -2.26
RKR1YMR247C FTH1P38310 465 aa0.94□□□□□ -2.26
RKR1YMR247C ERC1P38767 581 aa0.94□□□□□ -2.26
RKR1YMR247C CCT4P39078 528 aaKnown RBP0.94□□□□□ -2.26
RKR1YMR247C PHO90P39535 881 aa0.94□□□□□ -2.26
RKR1YMR247C FLC2P39719 783 aa0.94□□□□□ -2.26
RKR1YMR247C SAP1P39955 897 aaKnown RBP0.94□□□□□ -2.26
RKR1YMR247C POL31P46957 487 aa0.94□□□□□ -2.26
RKR1YMR247C MDV1P47025 714 aa0.94□□□□□ -2.26
RKR1YMR247C MSY1P48527 492 aa0.94□□□□□ -2.26
RKR1YMR247C COP1P53622 1201 aaKnown RBP0.94□□□□□ -2.26
RKR1YMR247C TEP1P53916 434 aa0.94□□□□□ -2.26
RKR1YMR247C RSC9Q03124 581 aa0.94□□□□□ -2.26
RKR1YMR247C RIM13Q03792 727 aa0.94□□□□□ -2.26
RKR1YMR247C PLM2Q04383 521 aa0.94□□□□□ -2.26
RKR1YMR247C RTT103Q05543 409 aa0.94□□□□□ -2.26
RKR1YMR247C UTP21Q06078 939 aaPredicted RBP0.94□□□□□ -2.26
RKR1YMR247C YDL242WQ07746 117 aa0.94□□□□□ -2.26
RKR1YMR247C SSP2Q08646 371 aa0.94□□□□□ -2.26
RKR1YMR247C YLR049CQ12110 428 aa0.94□□□□□ -2.26
RKR1YMR247C SNU66Q12420 587 aaPredicted RBP0.94□□□□□ -2.26
RKR1YMR247C LAM4P38800 1345 aa0.94□□□□□ -2.26
RKR1YMR247C ULS1Q08562 1619 aa0.94□□□□□ -2.26
RKR1YMR247C GPH1P06738 902 aaKnown RBP0.94□□□□□ -2.26
RKR1YMR247C PRP4P20053 465 aaKnown RBP0.94□□□□□ -2.26
RKR1YMR247C STE50P25344 346 aa0.94□□□□□ -2.26
RKR1YMR247C YJU2P28320 278 aaPredicted RBP0.94□□□□□ -2.26
RKR1YMR247C SSH4P32343 579 aa0.94□□□□□ -2.26
RKR1YMR247C MTC7P32633 139 aa0.94□□□□□ -2.26
RKR1YMR247C PIM1P36775 1133 aa0.94□□□□□ -2.26
RKR1YMR247C YHR033WP38690 423 aa0.94□□□□□ -2.26
RKR1YMR247C RIX1P38883 763 aaPredicted RBP0.94□□□□□ -2.26
RKR1YMR247C FTR1P40088 404 aa0.94□□□□□ -2.26
RKR1YMR247C VRG4P40107 337 aa0.94□□□□□ -2.26
RKR1YMR247C TPM2P40414 161 aa0.94□□□□□ -2.26
RKR1YMR247C CSM2P40465 213 aa0.94□□□□□ -2.26
RKR1YMR247C DPB11P47027 764 aaPredicted RBP0.94□□□□□ -2.26
RKR1YMR247C VPS25P47142 202 aa0.94□□□□□ -2.26
RKR1YMR247C EAF7P53911 425 aaKnown RBP0.94□□□□□ -2.26
RKR1YMR247C MPS1P54199 764 aa0.94□□□□□ -2.26
RKR1YMR247C HCR1Q05775 265 aaKnown RBP0.94□□□□□ -2.26
RKR1YMR247C PIG1Q06216 648 aa0.94□□□□□ -2.26
RKR1YMR247C VPS36Q06696 566 aa0.94□□□□□ -2.26
RKR1YMR247C BRE1Q07457 700 aaKnown RBP0.94□□□□□ -2.26
RKR1YMR247C MCH4Q08268 501 aa0.94□□□□□ -2.26
RKR1YMR247C SSM4P40318 1319 aa0.94□□□□□ -2.26
RKR1YMR247C FKS3Q04952 1785 aa0.94□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 46 ms