RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W MDH1P17505 334 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59not detected
ROT1YMR200W YCK1P23291 538 aa5.09□□□□□ -1.59
ROT1YMR200W PRE8P23639 250 aa5.09□□□□□ -1.59
ROT1YMR200W CLB3P24870 427 aa5.09□□□□□ -1.59
ROT1YMR200W MRP20P32387 263 aa5.09□□□□□ -1.59
ROT1YMR200W FRD1P32614 470 aaKnown RBP5.09□□□□□ -1.59
ROT1YMR200W GYP6P32806 458 aa5.09□□□□□ -1.59
ROT1YMR200W AKL1P38080 1108 aaKnown RBP5.09□□□□□ -1.59
ROT1YMR200W SRO77P38163 1010 aa5.09□□□□□ -1.59
ROT1YMR200W FLC2P39719 783 aa5.09□□□□□ -1.59
ROT1YMR200W YIL161WP40449 235 aaKnown RBP5.09□□□□□ -1.59
ROT1YMR200W CAB2P40506 365 aa5.09□□□□□ -1.59
ROT1YMR200W EFM4P40516 257 aa5.09□□□□□ -1.59
ROT1YMR200W BUD27P43573 796 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59not detected
ROT1YMR200W NOP9P47077 666 aaKnown RBP5.09□□□□□ -1.59
ROT1YMR200W IMA1P53051 589 aa5.09□□□□□ -1.59
ROT1YMR200W CUL3P53202 744 aa5.09□□□□□ -1.59
ROT1YMR200W SPO1P53541 631 aa5.09□□□□□ -1.59
ROT1YMR200W YNR068CP53754 272 aa5.09□□□□□ -1.59
ROT1YMR200W TOF1P53840 1238 aa5.09□□□□□ -1.59
ROT1YMR200W LEE1Q02799 301 aaKnown RBP5.09□□□□□ -1.59
ROT1YMR200W RAD30Q04049 632 aa5.09□□□□□ -1.59
ROT1YMR200W YPS7Q06325 596 aa5.09□□□□□ -1.59
ROT1YMR200W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59not detected
ROT1YMR200W HOS1Q12214 470 aa5.09□□□□□ -1.59
ROT1YMR200W MDY2Q12285 212 aa5.09□□□□□ -1.59
ROT1YMR200W SKS1Q12505 502 aa5.09□□□□□ -1.59
ROT1YMR200W ATG11Q12527 1178 aa5.09□□□□□ -1.59
ROT1YMR200W OM45P16547 393 aa5.08□□□□□ -1.6
ROT1YMR200W PRP28P23394 588 aa5.08□□□□□ -1.6
ROT1YMR200W RAD51P25454 400 aa5.08□□□□□ -1.6
ROT1YMR200W MTG2P38860 518 aa5.08□□□□□ -1.6
ROT1YMR200W BFR1P38934 470 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6 RIP-Chip
ROT1YMR200W LYS9P38999 446 aa5.08□□□□□ -1.6
ROT1YMR200W BUD16P39988 312 aa5.08□□□□□ -1.6
ROT1YMR200W FMP10P40098 244 aa5.08□□□□□ -1.6
ROT1YMR200W BST1P43571 1029 aa5.08□□□□□ -1.6
ROT1YMR200W COG1P53079 417 aa5.08□□□□□ -1.6
ROT1YMR200W TEX1P53851 422 aaKnown RBP5.08□□□□□ -1.6
ROT1YMR200W ORC4P54791 529 aa5.08□□□□□ -1.6
ROT1YMR200W CWC21Q03375 135 aaKnown RBP5.08□□□□□ -1.6
ROT1YMR200W ECM22Q05958 814 aaPredicted RBP5.08□□□□□ -1.6
ROT1YMR200W SPH1Q06160 661 aa5.08□□□□□ -1.6
ROT1YMR200W YLR456WQ06199 204 aa5.08□□□□□ -1.6
ROT1YMR200W BMS1Q08965 1183 aaKnown RBP5.08□□□□□ -1.6
ROT1YMR200W NMD4Q12129 218 aa5.08□□□□□ -1.6
ROT1YMR200W GPM3Q12326 303 aa5.08□□□□□ -1.6
ROT1YMR200W URA3P03962 267 aa5.07□□□□□ -1.6
ROT1YMR200W STE12P13574 688 aa5.07□□□□□ -1.6
ROT1YMR200W GRR1P24814 1151 aa5.07□□□□□ -1.6
ROT1YMR200W CAP1P28495 268 aaKnown RBP5.07□□□□□ -1.6
ROT1YMR200W MSP1P28737 362 aa5.07□□□□□ -1.6
ROT1YMR200W NIP1P32497 812 aaKnown RBP5.07□□□□□ -1.6
ROT1YMR200W HIS7P33734 552 aaKnown RBP5.07□□□□□ -1.6
ROT1YMR200W YHR033WP38690 423 aa5.07□□□□□ -1.6
ROT1YMR200W SMF1P38925 575 aa5.07□□□□□ -1.6
ROT1YMR200W OSW5P40219 148 aa5.07□□□□□ -1.6
ROT1YMR200W PFK26P40433 827 aaKnown RBP5.07□□□□□ -1.6
ROT1YMR200W IST3P40565 148 aaPredicted RBP5.07□□□□□ -1.6
ROT1YMR200W GCD10P41814 478 aa5.07□□□□□ -1.6
ROT1YMR200W TEL2P53038 688 aa5.07□□□□□ -1.6
ROT1YMR200W RIA1P53893 1110 aa5.07□□□□□ -1.6
ROT1YMR200W FDC1Q03034 503 aa5.07□□□□□ -1.6
ROT1YMR200W STP4Q07351 490 aa5.07□□□□□ -1.6
ROT1YMR200W CRD1Q07560 283 aa5.07□□□□□ -1.6
ROT1YMR200W FMP45Q07651 309 aa5.07□□□□□ -1.6
ROT1YMR200W RIM20Q12033 661 aa5.07□□□□□ -1.6
ROT1YMR200W SPE3Q12074 293 aaKnown RBP5.07□□□□□ -1.6
ROT1YMR200W HOM2P13663 365 aaKnown RBP5.06□□□□□ -1.6
ROT1YMR200W VPS17P32913 551 aa5.06□□□□□ -1.6
ROT1YMR200W NIP100P33420 868 aa5.06□□□□□ -1.6
ROT1YMR200W YBR259WP38338 688 aa5.06□□□□□ -1.6
ROT1YMR200W TIF5P38431 405 aaKnown RBP5.06□□□□□ -1.6
ROT1YMR200W YHR097CP38809 366 aaKnown RBP5.06□□□□□ -1.6
ROT1YMR200W YEL057CP39983 233 aa5.06□□□□□ -1.6
ROT1YMR200W MET18P40469 1032 aa5.06□□□□□ -1.6
ROT1YMR200W NAS2P40555 220 aa5.06□□□□□ -1.6
ROT1YMR200W AGX1P43567 385 aa5.06□□□□□ -1.6
ROT1YMR200W AIP1P46680 615 aaKnown RBP5.06□□□□□ -1.6
ROT1YMR200W SNF12P53628 566 aa5.06□□□□□ -1.6
ROT1YMR200W SQS1P53866 767 aaKnown RBP5.06□□□□□ -1.6
ROT1YMR200W REG1Q00816 1014 aa5.06□□□□□ -1.6
ROT1YMR200W ATG21Q02887 496 aa5.06□□□□□ -1.6
ROT1YMR200W RCO1Q04779 684 aa5.06□□□□□ -1.6
ROT1YMR200W GTB1Q04924 702 aa5.06□□□□□ -1.6
ROT1YMR200W RPB2P08518 1224 aaKnown RBP5.05□□□□□ -1.6
ROT1YMR200W YML002WP0CF17 737 aa5.05□□□□□ -1.6
ROT1YMR200W HNM1P19807 563 aa5.05□□□□□ -1.6
ROT1YMR200W CWH43P25618 953 aa5.05□□□□□ -1.6
ROT1YMR200W YCR051WP25631 222 aa5.05□□□□□ -1.6
ROT1YMR200W SUR1P33300 382 aa5.05□□□□□ -1.6
ROT1YMR200W UBP11P36026 717 aa5.05□□□□□ -1.6
ROT1YMR200W APN2P38207 520 aa5.05□□□□□ -1.6
ROT1YMR200W REG2P38232 338 aa5.05□□□□□ -1.6
ROT1YMR200W MIP6P38760 659 aaKnown RBP5.05□□□□□ -1.6
ROT1YMR200W VPS45P38932 577 aa5.05□□□□□ -1.6
ROT1YMR200W FMP52P40008 231 aa5.05□□□□□ -1.6
ROT1YMR200W BUD8P41698 603 aa5.05□□□□□ -1.6
ROT1YMR200W BAP3P41815 604 aa5.05□□□□□ -1.6
ROT1YMR200W FET5P43561 622 aa5.05□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms