RNA–Protein interactions for RNA: YMR123W

PKR1, Transcript of V-ATPase assembly factor, yeastyeast

Gene PKR1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PKR1YMR123W ATG23Q06671 453 aa2.94□□□□□ -1.94
PKR1YMR123W MCH4Q08268 501 aa2.94□□□□□ -1.94
PKR1YMR123W DSE3Q08729 430 aa2.94□□□□□ -1.94
PKR1YMR123W BUD7Q08754 746 aa2.94□□□□□ -1.94
PKR1YMR123W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.94□□□□□ -1.94not detected
PKR1YMR123W ATP4P05626 244 aa2.93□□□□□ -1.94
PKR1YMR123W PCT1P13259 424 aa2.93□□□□□ -1.94
PKR1YMR123W GCD7P32502 381 aaPredicted RBP2.93□□□□□ -1.94
PKR1YMR123W GRX7P38068 203 aa2.93□□□□□ -1.94
PKR1YMR123W FSH1P38777 243 aaKnown RBP2.93□□□□□ -1.94
PKR1YMR123W VPS41P38959 992 aa2.93□□□□□ -1.94
PKR1YMR123W SKP2P42843 763 aa2.93□□□□□ -1.94
PKR1YMR123W SNA4Q07549 140 aa2.93□□□□□ -1.94
PKR1YMR123W MLH2Q07980 695 aa2.93□□□□□ -1.94
PKR1YMR123W LRE1P25579 583 aaKnown RBP2.92□□□□□ -1.94
PKR1YMR123W MSH1P25846 959 aa2.92□□□□□ -1.94
PKR1YMR123W ASG1P40467 964 aa2.92□□□□□ -1.94
PKR1YMR123W CAC2Q04199 468 aa2.92□□□□□ -1.94
PKR1YMR123W SWF1Q04629 336 aa2.92□□□□□ -1.94
PKR1YMR123W GSH2Q08220 491 aa2.92□□□□□ -1.94
PKR1YMR123W RRP6Q12149 733 aaKnown RBP2.92□□□□□ -1.94
PKR1YMR123W GPA1P08539 472 aa2.91□□□□□ -1.94
PKR1YMR123W YML003WP0CF16 290 aa2.91□□□□□ -1.94
PKR1YMR123W YFL068WP0CX99 160 aa2.91□□□□□ -1.94
PKR1YMR123W YLL066W-AP0CY00 160 aa2.91□□□□□ -1.94
PKR1YMR123W YLL067W-AP0CY01 160 aa2.91□□□□□ -1.94
PKR1YMR123W YBR138CP38277 524 aa2.91□□□□□ -1.94
PKR1YMR123W ARC40P38328 384 aaKnown RBP2.91□□□□□ -1.94
PKR1YMR123W PCL6P40038 420 aa2.91□□□□□ -1.94
PKR1YMR123W VPS27P40343 622 aaKnown RBP2.91□□□□□ -1.94
PKR1YMR123W UBP8P50102 471 aa2.91□□□□□ -1.94
PKR1YMR123W ADE16P54113 591 aaKnown RBP2.91□□□□□ -1.94
PKR1YMR123W TRS130Q03660 1102 aa2.91□□□□□ -1.94
PKR1YMR123W HIM1Q06674 414 aa2.91□□□□□ -1.94
PKR1YMR123W SUI3P09064 285 aaKnown RBP2.9□□□□□ -1.95
PKR1YMR123W MRP2P10663 115 aaPredicted RBP2.9□□□□□ -1.95
PKR1YMR123W YSP3P25036 478 aa2.9□□□□□ -1.95
PKR1YMR123W YCR043CP25361 127 aa2.9□□□□□ -1.95
PKR1YMR123W RFA2P26754 273 aaKnown RBP2.9□□□□□ -1.95
PKR1YMR123W GEX2P36173 615 aa2.9□□□□□ -1.95
PKR1YMR123W PUG1P40100 303 aa2.9□□□□□ -1.95
PKR1YMR123W TES1P41903 349 aaKnown RBP2.9□□□□□ -1.95
PKR1YMR123W ZAP1P47043 880 aa2.9□□□□□ -1.95
PKR1YMR123W VPS25P47142 202 aa2.9□□□□□ -1.95
PKR1YMR123W PAP2P53632 584 aaKnown RBP2.9□□□□□ -1.95
PKR1YMR123W YMR034CQ05131 434 aaPredicted RBP2.9□□□□□ -1.95
PKR1YMR123W YLR455WQ06188 304 aa2.9□□□□□ -1.95
PKR1YMR123W VAM6Q07468 1049 aa2.9□□□□□ -1.95
PKR1YMR123W NEW1Q08972 1196 aaKnown RBP2.9□□□□□ -1.95
PKR1YMR123W GCS1P35197 352 aa2.89□□□□□ -1.95
PKR1YMR123W EXO84P38261 753 aa2.89□□□□□ -1.95
PKR1YMR123W YHL041WP38730 149 aa2.89□□□□□ -1.95
PKR1YMR123W YAT2P40017 923 aa2.89□□□□□ -1.95
PKR1YMR123W FAF1P40546 346 aaPredicted RBP2.89□□□□□ -1.95
PKR1YMR123W ERR3P42222 437 aa2.89□□□□□ -1.95
PKR1YMR123W YGL036WP53185 909 aaPredicted RBP2.89□□□□□ -1.95
PKR1YMR123W DCP2P53550 970 aaKnown RBP2.89□□□□□ -1.95
PKR1YMR123W YLR281CQ05863 155 aa2.89□□□□□ -1.95
PKR1YMR123W ECI1Q05871 280 aa2.89□□□□□ -1.95
PKR1YMR123W FRE3Q08905 711 aa2.89□□□□□ -1.95
PKR1YMR123W SWT1Q12104 458 aa2.89□□□□□ -1.95
PKR1YMR123W RPL42AP0CX27 106 aaKnown RBP2.88□□□□□ -1.95
PKR1YMR123W RPL42BP0CX28 106 aaKnown RBP2.88□□□□□ -1.95
PKR1YMR123W SPO16P17122 198 aa2.88□□□□□ -1.95
PKR1YMR123W CLB4P24871 460 aa2.88□□□□□ -1.95
PKR1YMR123W YCR006CP25350 157 aa2.88□□□□□ -1.95
PKR1YMR123W NPR3P38742 1146 aa2.88□□□□□ -1.95
PKR1YMR123W MET30P39014 640 aa2.88□□□□□ -1.95
PKR1YMR123W YIL169CP40442 995 aa2.88□□□□□ -1.95
PKR1YMR123W YIL161WP40449 235 aaKnown RBP2.88□□□□□ -1.95
PKR1YMR123W ARP9Q05123 467 aa2.88□□□□□ -1.95
PKR1YMR123W GRS2Q06817 618 aa2.88□□□□□ -1.95
PKR1YMR123W POS5Q06892 414 aa2.88□□□□□ -1.95
PKR1YMR123W YER145C-AA0A023PYF4 145 aa2.87□□□□□ -1.95
PKR1YMR123W PHO81P17442 1178 aa2.87□□□□□ -1.95
PKR1YMR123W STE50P25344 346 aa2.87□□□□□ -1.95
PKR1YMR123W RGT1P32862 1170 aa2.87□□□□□ -1.95
PKR1YMR123W ADE17P38009 592 aaKnown RBP2.87□□□□□ -1.95
PKR1YMR123W MNN2P38069 597 aa2.87□□□□□ -1.95
PKR1YMR123W MAF1P41910 395 aa2.87□□□□□ -1.95
PKR1YMR123W CSL4P53859 292 aaPredicted RBP2.87□□□□□ -1.95
PKR1YMR123W BET4Q00618 327 aa2.87□□□□□ -1.95
PKR1YMR123W STP3Q05937 343 aa2.87□□□□□ -1.95
PKR1YMR123W SWA2Q06677 668 aa2.87□□□□□ -1.95
PKR1YMR123W NDD1Q08887 554 aa2.87□□□□□ -1.95
PKR1YMR123W YLR112WQ12130 139 aa2.87□□□□□ -1.95
PKR1YMR123W NYV1Q12255 253 aa2.87□□□□□ -1.95
PKR1YMR123W YOR111WQ99210 232 aa2.87□□□□□ -1.95
PKR1YMR123W NCP1P16603 691 aaKnown RBP2.86□□□□□ -1.95
PKR1YMR123W SRP54P20424 541 aaKnown RBP2.86□□□□□ -1.95
PKR1YMR123W YCL049CP25577 312 aa2.86□□□□□ -1.95
PKR1YMR123W NUP120P35729 1037 aa2.86□□□□□ -1.95
PKR1YMR123W MRPL36P36531 177 aa2.86□□□□□ -1.95
PKR1YMR123W UBP13P38187 747 aa2.86□□□□□ -1.95
PKR1YMR123W RKM3P38222 552 aa2.86□□□□□ -1.95
PKR1YMR123W ACA1P39970 489 aa2.86□□□□□ -1.95
PKR1YMR123W IZH1Q03419 316 aa2.86□□□□□ -1.95
PKR1YMR123W ECM16Q04217 1267 aaKnown RBP2.86□□□□□ -1.95
PKR1YMR123W YLR049CQ12110 428 aa2.86□□□□□ -1.95
PKR1YMR123W INO80P53115 1489 aa2.85□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 70.4 ms