RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W RRP9Q06506 573 aaKnown RBP5.36□□□□□ -1.55
SPG4YMR107W NBA1Q08229 501 aaKnown RBP5.36□□□□□ -1.55
SPG4YMR107W CUE5Q08412 411 aaKnown RBP5.36□□□□□ -1.55
SPG4YMR107W FLC1Q08967 793 aa5.36□□□□□ -1.55
SPG4YMR107W YPL260WQ08977 551 aa5.36□□□□□ -1.55
SPG4YMR107W APC9Q12107 265 aa5.36□□□□□ -1.55
SPG4YMR107W MED2Q12124 431 aa5.36□□□□□ -1.55
SPG4YMR107W ATP16Q12165 160 aa5.36□□□□□ -1.55
SPG4YMR107W GTT2Q12390 233 aa5.36□□□□□ -1.55
SPG4YMR107W EMP46Q12396 444 aa5.36□□□□□ -1.55
SPG4YMR107W RRP36Q12481 300 aaPredicted RBP5.36□□□□□ -1.55
SPG4YMR107W GPM1P00950 247 aaKnown RBP5.35□□□□□ -1.55
SPG4YMR107W RPS3P05750 240 aaKnown RBP5.35□□□□□ -1.55
SPG4YMR107W TPK3P05986 398 aa5.35□□□□□ -1.55
SPG4YMR107W CDC33P07260 213 aaKnown RBP5.35□□□□□ -1.55
SPG4YMR107W PUT2P07275 575 aa5.35□□□□□ -1.55
SPG4YMR107W PCK1P10963 549 aa5.35□□□□□ -1.55
SPG4YMR107W GLN4P13188 809 aaKnown RBP5.35□□□□□ -1.55
SPG4YMR107W PMS1P14242 873 aa5.35□□□□□ -1.55
SPG4YMR107W VPS33P20795 691 aa5.35□□□□□ -1.55
SPG4YMR107W KGD1P20967 1014 aaKnown RBP5.35□□□□□ -1.55
SPG4YMR107W SRO9P25567 434 aaKnown RBP5.35□□□□□ -1.55
SPG4YMR107W SPB1P25582 841 aaPredicted RBP5.35□□□□□ -1.55
SPG4YMR107W YCR015CP25616 317 aa5.35□□□□□ -1.55
SPG4YMR107W SBA1P28707 216 aaKnown RBP5.35□□□□□ -1.55
SPG4YMR107W MEI4P29467 408 aa5.35□□□□□ -1.55
SPG4YMR107W PPQ1P32945 549 aa5.35□□□□□ -1.55
SPG4YMR107W MRT4P33201 236 aaKnown RBP5.35□□□□□ -1.55
SPG4YMR107W TFA2P36145 328 aa5.35□□□□□ -1.55
SPG4YMR107W NDT80P38830 627 aa5.35□□□□□ -1.55
SPG4YMR107W FAA2P39518 744 aa5.35□□□□□ -1.55
SPG4YMR107W IRC6P43615 237 aa5.35□□□□□ -1.55
SPG4YMR107W HAM1P47119 197 aaKnown RBP5.35□□□□□ -1.55
SPG4YMR107W RMR1P53060 241 aa5.35□□□□□ -1.55
SPG4YMR107W RCF2P53721 224 aa5.35□□□□□ -1.55
SPG4YMR107W NOG2P53742 486 aaKnown RBP5.35□□□□□ -1.55
SPG4YMR107W HXT15P54854 567 aa5.35□□□□□ -1.55
SPG4YMR107W SPR6Q01684 191 aa5.35□□□□□ -1.55
SPG4YMR107W YPL034WQ03083 165 aa5.35□□□□□ -1.55
SPG4YMR107W PFA5Q03289 374 aa5.35□□□□□ -1.55
SPG4YMR107W HER2Q03557 464 aa5.35□□□□□ -1.55
SPG4YMR107W YMR209CQ03648 457 aa5.35□□□□□ -1.55
SPG4YMR107W URC2Q04411 772 aa5.35□□□□□ -1.55
SPG4YMR107W PRM6Q04705 352 aa5.35□□□□□ -1.55
SPG4YMR107W EMG1Q06287 252 aaKnown RBP5.35□□□□□ -1.55
SPG4YMR107W ARR2Q06597 130 aa5.35□□□□□ -1.55
SPG4YMR107W SGT1Q08446 395 aa5.35□□□□□ -1.55
SPG4YMR107W YDL109CQ12103 647 aa5.35□□□□□ -1.55
SPG4YMR107W DPH6Q12429 685 aa5.35□□□□□ -1.55
SPG4YMR107W ARP6Q12509 438 aa5.35□□□□□ -1.55
SPG4YMR107W CDC19P00549 500 aaKnown RBP5.34□□□□□ -1.55
SPG4YMR107W SPE1P08432 466 aa5.34□□□□□ -1.55
SPG4YMR107W WHI2P12611 486 aa5.34□□□□□ -1.55
SPG4YMR107W KSS1P14681 368 aa5.34□□□□□ -1.55
SPG4YMR107W NMT1P14743 455 aa5.34□□□□□ -1.55
SPG4YMR107W PMA2P19657 947 aa5.34□□□□□ -1.55
SPG4YMR107W DAL2P25335 343 aa5.34□□□□□ -1.55
SPG4YMR107W SNT1P25357 1226 aa5.34□□□□□ -1.55
SPG4YMR107W YCR016WP25617 290 aaKnown RBP5.34□□□□□ -1.55
SPG4YMR107W PTC6P25646 442 aa5.34□□□□□ -1.55
SPG4YMR107W CMK1P27466 446 aaKnown RBP5.34□□□□□ -1.55
SPG4YMR107W KRE2P27809 442 aa5.34□□□□□ -1.55
SPG4YMR107W PEX3P28795 441 aa5.34□□□□□ -1.55
SPG4YMR107W NUP2P32499 720 aa5.34□□□□□ -1.55
SPG4YMR107W ABD1P32783 436 aaPredicted RBP5.34□□□□□ -1.55
SPG4YMR107W FRE1P32791 686 aa5.34□□□□□ -1.55
SPG4YMR107W UGA4P32837 571 aa5.34□□□□□ -1.55
SPG4YMR107W CSG2P35206 410 aa5.34□□□□□ -1.55
SPG4YMR107W UBP11P36026 717 aa5.34□□□□□ -1.55
SPG4YMR107W ECM31P38122 312 aa5.34□□□□□ -1.55
SPG4YMR107W YBR241CP38142 488 aa5.34□□□□□ -1.55
SPG4YMR107W YEL020CP39994 560 aa5.34□□□□□ -1.55
SPG4YMR107W TMN3P40071 706 aa5.34□□□□□ -1.55
SPG4YMR107W YER156CP40093 338 aaKnown RBP5.34□□□□□ -1.55
SPG4YMR107W MSS2P40990 351 aa5.34□□□□□ -1.55
SPG4YMR107W YFL012WP43580 148 aa5.34□□□□□ -1.55
SPG4YMR107W CWC23P52868 283 aaPredicted RBP5.34□□□□□ -1.55
SPG4YMR107W GET1P53192 235 aa5.34□□□□□ -1.55
SPG4YMR107W TWF1P53250 332 aa5.34□□□□□ -1.55
SPG4YMR107W CLD1P53264 445 aa5.34□□□□□ -1.55
SPG4YMR107W RPT4P53549 437 aaKnown RBP5.34□□□□□ -1.55
SPG4YMR107W ESF2P53743 316 aaKnown RBP5.34□□□□□ -1.55
SPG4YMR107W TIM8P57744 87 aa5.34□□□□□ -1.55
SPG4YMR107W RSN1Q03516 953 aa5.34□□□□□ -1.55
SPG4YMR107W YMR111CQ04461 462 aaPredicted RBP5.34□□□□□ -1.55
SPG4YMR107W CSM3Q04659 317 aa5.34□□□□□ -1.55
SPG4YMR107W PEX10Q05568 337 aa5.34□□□□□ -1.55
SPG4YMR107W YCS4Q06156 1176 aa5.34□□□□□ -1.55
SPG4YMR107W YPR084WQ06821 456 aa5.34□□□□□ -1.55
SPG4YMR107W LOT6Q07923 191 aa5.34□□□□□ -1.55
SPG4YMR107W THI21Q08975 551 aa5.34□□□□□ -1.55
SPG4YMR107W PSY3Q12318 242 aa5.34□□□□□ -1.55
SPG4YMR107W LDB17Q12342 491 aa5.34□□□□□ -1.55
SPG4YMR107W FMP16Q12497 93 aa5.34□□□□□ -1.55
SPG4YMR107W ADF1Q2V2Q1 113 aa5.34□□□□□ -1.55
SPG4YMR107W YBR298C-AQ8TGK4 73 aa5.34□□□□□ -1.55
SPG4YMR107W CAR1P00812 333 aaKnown RBP5.33□□□□□ -1.56
SPG4YMR107W FUS1P11710 512 aa5.33□□□□□ -1.56
SPG4YMR107W VPS34P22543 875 aa5.33□□□□□ -1.56
SPG4YMR107W PEX1P24004 1043 aa5.33□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms