RNA–Protein interactions for RNA: YLR243W

GPN3, Transcript of Putative GTPase with a role in biogenesis of RNA pol II and polIII, yeastyeast

Gene GPN3, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GPN3YLR243W RPT3P33298 428 aaKnown RBP4.3□□□□□ -1.72
GPN3YLR243W JHD1P40034 492 aa4.3□□□□□ -1.72
GPN3YLR243W PSF2P40359 213 aa4.3□□□□□ -1.72
GPN3YLR243W SKP2P42843 763 aa4.3□□□□□ -1.72
GPN3YLR243W BNA1P47096 177 aa4.3□□□□□ -1.72
GPN3YLR243W SCW4P53334 386 aaKnown RBP4.3□□□□□ -1.72
GPN3YLR243W ATP2P00830 511 aaKnown RBP4.29□□□□□ -1.72
GPN3YLR243W UBC1P21734 215 aaKnown RBP4.29□□□□□ -1.72
GPN3YLR243W SWC3P31376 625 aa4.29□□□□□ -1.72
GPN3YLR243W ARN1P38731 627 aa4.29□□□□□ -1.72
GPN3YLR243W YMR124WP39523 943 aaKnown RBP4.29□□□□□ -1.72
GPN3YLR243W COG1P53079 417 aa4.29□□□□□ -1.72
GPN3YLR243W PAP2P53632 584 aaKnown RBP4.29□□□□□ -1.72
GPN3YLR243W BLS1Q06071 122 aa4.29□□□□□ -1.72
GPN3YLR243W NUC1P08466 329 aa4.28□□□□□ -1.72
GPN3YLR243W GPA1P08539 472 aa4.28□□□□□ -1.72
GPN3YLR243W TY2A-LR1P0C2J4 438 aa4.28□□□□□ -1.72
GPN3YLR243W TY2A-FP0CX61 438 aa4.28□□□□□ -1.72
GPN3YLR243W TY2A-GR2P0CX62 438 aa4.28□□□□□ -1.72
GPN3YLR243W CNA1P23287 553 aa4.28□□□□□ -1.72
GPN3YLR243W TY2A-CP25383 438 aa4.28□□□□□ -1.72
GPN3YLR243W ASK1P35734 292 aa4.28□□□□□ -1.72
GPN3YLR243W GND1P38720 489 aaKnown RBP4.28□□□□□ -1.72
GPN3YLR243W VPS41P38959 992 aa4.28□□□□□ -1.72
GPN3YLR243W PCI8P40512 444 aa4.28□□□□□ -1.72
GPN3YLR243W DJP1P40564 432 aa4.28□□□□□ -1.72
GPN3YLR243W CSL4P53859 292 aaPredicted RBP4.28□□□□□ -1.72
GPN3YLR243W EAF7P53911 425 aaKnown RBP4.28□□□□□ -1.72
GPN3YLR243W MPS1P54199 764 aa4.28□□□□□ -1.72
GPN3YLR243W MRPL13Q02204 264 aa4.28□□□□□ -1.72
GPN3YLR243W TY2A-DR2Q03483 438 aa4.28□□□□□ -1.72
GPN3YLR243W SWT1Q12104 458 aa4.28□□□□□ -1.72
GPN3YLR243W BAG7Q12128 409 aa4.28□□□□□ -1.72
GPN3YLR243W TY2A-BQ12260 438 aa4.28□□□□□ -1.72
GPN3YLR243W TY2A-OR2Q12293 438 aa4.28□□□□□ -1.72
GPN3YLR243W TY2A-DR1Q12392 438 aa4.28□□□□□ -1.72
GPN3YLR243W TY2A-OR1Q12439 438 aa4.28□□□□□ -1.72
GPN3YLR243W RRI1Q12468 440 aa4.28□□□□□ -1.72
GPN3YLR243W TY2A-DR3Q99303 438 aa4.28□□□□□ -1.72
GPN3YLR243W YPR089WO13585 888 aa4.27□□□□□ -1.73
GPN3YLR243W SRP54P20424 541 aaKnown RBP4.27□□□□□ -1.73
GPN3YLR243W AIM17P23180 465 aaKnown RBP4.27□□□□□ -1.73
GPN3YLR243W OCT1P35999 772 aa4.27□□□□□ -1.73
GPN3YLR243W ADE17P38009 592 aaKnown RBP4.27□□□□□ -1.73
GPN3YLR243W UBP13P38187 747 aa4.27□□□□□ -1.73
GPN3YLR243W YGL036WP53185 909 aaPredicted RBP4.27□□□□□ -1.73
GPN3YLR243W YNR061CP53747 219 aa4.27□□□□□ -1.73
GPN3YLR243W YPL068CQ02749 293 aa4.27□□□□□ -1.73
GPN3YLR243W PDR8Q06149 701 aa4.27□□□□□ -1.73
GPN3YLR243W ATG23Q06671 453 aa4.27□□□□□ -1.73
GPN3YLR243W SWA2Q06677 668 aa4.27□□□□□ -1.73
GPN3YLR243W MSS51P32335 436 aa4.26□□□□□ -1.73
GPN3YLR243W NPR3P38742 1146 aa4.26□□□□□ -1.73
GPN3YLR243W PSD1P39006 500 aa4.26□□□□□ -1.73
GPN3YLR243W PHM8P40025 321 aa4.26□□□□□ -1.73
GPN3YLR243W SWP82P43554 623 aa4.26□□□□□ -1.73
GPN3YLR243W YPT11P48559 417 aa4.26□□□□□ -1.73
GPN3YLR243W GTR1Q00582 310 aa4.26□□□□□ -1.73
GPN3YLR243W TMA16Q08687 178 aa4.26□□□□□ -1.73
GPN3YLR243W TPK1P06244 397 aa4.25□□□□□ -1.73
GPN3YLR243W YCR006CP25350 157 aa4.25□□□□□ -1.73
GPN3YLR243W FUI1P38196 639 aa4.25□□□□□ -1.73
GPN3YLR243W TPA1P40032 644 aaKnown RBP4.25□□□□□ -1.73
GPN3YLR243W YIL161WP40449 235 aaKnown RBP4.25□□□□□ -1.73
GPN3YLR243W SAP185P40856 1058 aa4.25□□□□□ -1.73
GPN3YLR243W LYS20P48570 428 aaKnown RBP4.25□□□□□ -1.73
GPN3YLR243W CTF18P49956 741 aa4.25□□□□□ -1.73
GPN3YLR243W PSP1P50896 841 aaKnown RBP4.25□□□□□ -1.73
GPN3YLR243W ECM22Q05958 814 aaPredicted RBP4.25□□□□□ -1.73
GPN3YLR243W PIG1Q06216 648 aa4.25□□□□□ -1.73
GPN3YLR243W CSR1Q06705 408 aaKnown RBP4.25□□□□□ -1.73
GPN3YLR243W MCH4Q08268 501 aa4.25□□□□□ -1.73
GPN3YLR243W FRE3Q08905 711 aa4.25□□□□□ -1.73
GPN3YLR243W TRM8Q12009 286 aa4.25□□□□□ -1.73
GPN3YLR243W CHO1P08456 276 aa4.24□□□□□ -1.73
GPN3YLR243W PET111P08468 800 aa4.24□□□□□ -1.73
GPN3YLR243W SUI3P09064 285 aaKnown RBP4.24□□□□□ -1.73
GPN3YLR243W RPL42AP0CX27 106 aaKnown RBP4.24□□□□□ -1.73
GPN3YLR243W RPL42BP0CX28 106 aaKnown RBP4.24□□□□□ -1.73
GPN3YLR243W PXL1P36166 706 aa4.24□□□□□ -1.73
GPN3YLR243W SMK1P41808 388 aa4.24□□□□□ -1.73
GPN3YLR243W REG1Q00816 1014 aa4.24□□□□□ -1.73
GPN3YLR243W ATG16Q03818 150 aa4.24□□□□□ -1.73
GPN3YLR243W CRN1Q06440 651 aa4.24□□□□□ -1.73
GPN3YLR243W PUF2Q12221 1075 aaKnown RBP RIP-Chip data4.24□□□□□ -1.73not detected
GPN3YLR243W SNF1P06782 633 aaKnown RBP4.23□□□□□ -1.73
GPN3YLR243W NTR2P36118 322 aaPredicted RBP4.23□□□□□ -1.73
GPN3YLR243W TOM71P38825 639 aaKnown RBP4.23□□□□□ -1.73
GPN3YLR243W IRC8P47046 822 aa4.23□□□□□ -1.73
GPN3YLR243W YNL144CP53907 740 aa4.23□□□□□ -1.73
GPN3YLR243W VTC3Q02725 835 aa4.23□□□□□ -1.73
GPN3YLR243W YLR455WQ06188 304 aa4.23□□□□□ -1.73
GPN3YLR243W ATX2Q12067 313 aa4.23□□□□□ -1.73
GPN3YLR243W VCX1Q99385 411 aa4.23□□□□□ -1.73
GPN3YLR243W GUK1P15454 187 aaKnown RBP4.22□□□□□ -1.73
GPN3YLR243W FAF1P40546 346 aaPredicted RBP4.22□□□□□ -1.73
GPN3YLR243W RTS3P53289 263 aa4.22□□□□□ -1.73
GPN3YLR243W YLR112WQ12130 139 aa4.22□□□□□ -1.73
GPN3YLR243W SPO16P17122 198 aa4.21□□□□□ -1.74
GPN3YLR243W RAD16P31244 790 aa4.21□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 596 ms