RNA–Protein interactions for RNA: YKL027W

TCD2, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeast

Gene TCD2, Length 1,344 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TCD2	YKL027W	PAN6	P40459	309 aa		11.77	□□□□□ -0.53
TCD2	YKL027W	YJR124C	P47159	448 aa		11.77	□□□□□ -0.53
TCD2	YKL027W	NUP84	P52891	726 aa		11.77	□□□□□ -0.53
TCD2	YKL027W	NMA2	P53204	395 aa		11.77	□□□□□ -0.53
TCD2	YKL027W	FAP1	P53971	965 aa		11.77	□□□□□ -0.53
TCD2	YKL027W	TRS31	Q03337	283 aa		11.77	□□□□□ -0.53
TCD2	YKL027W	USA1	Q03714	838 aa		11.77	□□□□□ -0.53
TCD2	YKL027W	NHX1	Q04121	633 aa		11.77	□□□□□ -0.53
TCD2	YKL027W	SLD7	Q08457	257 aa		11.77	□□□□□ -0.53
TCD2	YKL027W	UBR1	P19812	1950 aa		11.76	□□□□□ -0.53
TCD2	YKL027W	ATP12	P22135	325 aa		11.76	□□□□□ -0.53
TCD2	YKL027W	MAK5	P38112	773 aa	Predicted RBP	11.76	□□□□□ -0.53
TCD2	YKL027W	MRP21	P38175	177 aa		11.76	□□□□□ -0.53
TCD2	YKL027W	DSF2	P38213	736 aa		11.76	□□□□□ -0.53
TCD2	YKL027W	SPC97	P38863	823 aa		11.76	□□□□□ -0.53
TCD2	YKL027W	SAP1	P39955	897 aa	Known RBP	11.76	□□□□□ -0.53
TCD2	YKL027W	SAP4	P53036	818 aa		11.76	□□□□□ -0.53
TCD2	YKL027W	MNT2	P53059	558 aa		11.76	□□□□□ -0.53
TCD2	YKL027W	BUD20	Q08004	166 aa	Predicted RBP	11.76	□□□□□ -0.53
TCD2	YKL027W	IMP3	P32899	183 aa	Predicted RBP	11.75	□□□□□ -0.53
TCD2	YKL027W	ETR1	P38071	380 aa		11.75	□□□□□ -0.53
TCD2	YKL027W	COG1	P53079	417 aa		11.75	□□□□□ -0.53
TCD2	YKL027W	SPC105	P53148	917 aa		11.75	□□□□□ -0.53
TCD2	YKL027W	LSC1	P53598	329 aa	Known RBP	11.75	□□□□□ -0.53
TCD2	YKL027W	PEX13	P80667	386 aa		11.75	□□□□□ -0.53
TCD2	YKL027W	YDR109C	Q04585	715 aa		11.75	□□□□□ -0.53
TCD2	YKL027W	MCP2	Q06567	569 aa		11.75	□□□□□ -0.53
TCD2	YKL027W	MEX67	Q99257	599 aa	Known RBP	11.75	□□□□□ -0.53
TCD2	YKL027W	YOR338W	Q99326	363 aa		11.75	□□□□□ -0.53
TCD2	YKL027W	LEU1	P07264	779 aa	Known RBP	11.74	□□□□□ -0.53
TCD2	YKL027W	GUT1	P32190	709 aa		11.74	□□□□□ -0.53
TCD2	YKL027W	SCD5	P34758	872 aa		11.74	□□□□□ -0.53
TCD2	YKL027W	SPT23	P35210	1082 aa		11.74	□□□□□ -0.53
TCD2	YKL027W	SET3	P36124	751 aa		11.74	□□□□□ -0.53
TCD2	YKL027W	GDH3	P39708	457 aa		11.74	□□□□□ -0.53
TCD2	YKL027W	SEO1	P39709	593 aa		11.74	□□□□□ -0.53
TCD2	YKL027W	SLX8	P40072	274 aa		11.74	□□□□□ -0.53
TCD2	YKL027W	RPL34B	P40525	121 aa	Known RBP	11.74	□□□□□ -0.53
TCD2	YKL027W	REF2	P42073	533 aa	Predicted RBP	11.74	□□□□□ -0.53
TCD2	YKL027W	GLG2	P47011	380 aa		11.74	□□□□□ -0.53
TCD2	YKL027W	ARH1	P48360	493 aa		11.74	□□□□□ -0.53
TCD2	YKL027W	PEX8	P53248	589 aa		11.74	□□□□□ -0.53
TCD2	YKL027W	PET117	Q02771	107 aa		11.74	□□□□□ -0.53
TCD2	YKL027W	CDC123	Q05791	360 aa		11.74	□□□□□ -0.53
TCD2	YKL027W	YET3	Q07451	203 aa		11.74	□□□□□ -0.53
TCD2	YKL027W	VHS3	Q08438	674 aa		11.74	□□□□□ -0.53
TCD2	YKL027W	FRT1	Q99332	602 aa		11.74	□□□□□ -0.53
TCD2	YKL027W	SEC63	P14906	663 aa		11.73	□□□□□ -0.53
TCD2	YKL027W	RIM1	P32445	135 aa	Known RBP	11.73	□□□□□ -0.53
TCD2	YKL027W	OAF3	P36023	863 aa		11.73	□□□□□ -0.53
TCD2	YKL027W	FMO1	P38866	432 aa		11.73	□□□□□ -0.53
TCD2	YKL027W	CSN12	P47130	423 aa		11.73	□□□□□ -0.53
TCD2	YKL027W	HST2	P53686	357 aa		11.73	□□□□□ -0.53
TCD2	YKL027W	TDA7	P53882	636 aa	Predicted RBP	11.73	□□□□□ -0.53
TCD2	YKL027W	YMR178W	Q03219	274 aa	Known RBP	11.73	□□□□□ -0.53
TCD2	YKL027W	CLU1	Q03690	1277 aa	Known RBP	11.73	□□□□□ -0.53
TCD2	YKL027W	PPN1	Q04119	674 aa		11.73	□□□□□ -0.53
TCD2	YKL027W	RSC2	Q06488	889 aa		11.73	□□□□□ -0.53
TCD2	YKL027W	YLR149C	Q99296	730 aa		11.73	□□□□□ -0.53
TCD2	YKL027W	ERG20	P08524	352 aa	Known RBP	11.72	□□□□□ -0.53
TCD2	YKL027W	EMC4	P53073	190 aa		11.72	□□□□□ -0.53
TCD2	YKL027W	YDR132C	Q03900	495 aa		11.72	□□□□□ -0.53
TCD2	YKL027W	RPN9	Q04062	393 aa	Known RBP	11.72	□□□□□ -0.53
TCD2	YKL027W	SFH1	Q06168	426 aa		11.72	□□□□□ -0.53
TCD2	YKL027W	SSC1	P0CS90	654 aa	Known RBP	11.71	□□□□□ -0.53
TCD2	YKL027W	KIP2	P28743	706 aa		11.71	□□□□□ -0.53
TCD2	YKL027W	HRR25	P29295	494 aa	Known RBP	11.71	□□□□□ -0.53
TCD2	YKL027W	GDA1	P32621	518 aa		11.71	□□□□□ -0.53
TCD2	YKL027W	BEM3	P32873	1128 aa		11.71	□□□□□ -0.53
TCD2	YKL027W	SSP120	P39931	234 aa	Known RBP	11.71	□□□□□ -0.53
TCD2	YKL027W	RPH1	P39956	796 aa		11.71	□□□□□ -0.53
TCD2	YKL027W	TES1	P41903	349 aa	Known RBP	11.71	□□□□□ -0.53
TCD2	YKL027W	CCT8	P47079	568 aa	Known RBP	11.71	□□□□□ -0.53
TCD2	YKL027W	YNL143C	P53908	130 aa		11.71	□□□□□ -0.53
TCD2	YKL027W	TFB2	Q02939	513 aa		11.71	□□□□□ -0.53
TCD2	YKL027W	YEL077C	Q3E7X8	1277 aa		11.71	□□□□□ -0.53
TCD2	YKL027W	HOM2	P13663	365 aa	Known RBP	11.7	□□□□□ -0.54
TCD2	YKL027W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	11.7	□□□□□ -0.54	not detected
TCD2	YKL027W	TOM20	P35180	183 aa		11.7	□□□□□ -0.54
TCD2	YKL027W	DCW1	P36091	449 aa		11.7	□□□□□ -0.54
TCD2	YKL027W	YHI9	P38765	294 aa		11.7	□□□□□ -0.54
TCD2	YKL027W	LRP1	P38801	184 aa	Known RBP	11.7	□□□□□ -0.54
TCD2	YKL027W	BUD22	Q04347	519 aa	Known RBP	11.7	□□□□□ -0.54
TCD2	YKL027W	OMS1	Q06668	471 aa		11.7	□□□□□ -0.54
TCD2	YKL027W	SYT1	Q06836	1226 aa		11.7	□□□□□ -0.54
TCD2	YKL027W	YOR223W	Q12015	292 aa		11.7	□□□□□ -0.54
TCD2	YKL027W	TGL5	Q12043	749 aa		11.7	□□□□□ -0.54
TCD2	YKL027W	BEM2	P39960	2167 aa	Known RBP	11.69	□□□□□ -0.54
TCD2	YKL027W	BRF1	P29056	596 aa		11.69	□□□□□ -0.54
TCD2	YKL027W	LDB7	P38210	180 aa		11.69	□□□□□ -0.54
TCD2	YKL027W	YSW1	P38280	609 aa		11.69	□□□□□ -0.54
TCD2	YKL027W	PPX1	P38698	397 aa		11.69	□□□□□ -0.54
TCD2	YKL027W	STN1	P38960	494 aa		11.69	□□□□□ -0.54
TCD2	YKL027W	MEF2	P39677	819 aa		11.69	□□□□□ -0.54
TCD2	YKL027W	SEC28	P40509	296 aa	Known RBP	11.69	□□□□□ -0.54
TCD2	YKL027W	SER33	P40510	469 aa		11.69	□□□□□ -0.54
TCD2	YKL027W	CTK3	P46963	296 aa	Predicted RBP	11.69	□□□□□ -0.54
TCD2	YKL027W	YGL140C	P53120	1219 aa		11.69	□□□□□ -0.54
TCD2	YKL027W	NUT2	Q06213	157 aa		11.69	□□□□□ -0.54
TCD2	YKL027W	KCS1	Q12494	1050 aa		11.69	□□□□□ -0.54

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms