RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W GSH1P32477 678 aa2.51□□□□□ -2.01
MSL1YIR009W TGL1P34163 548 aa2.51□□□□□ -2.01
MSL1YIR009W SDS22P36047 338 aa2.51□□□□□ -2.01
MSL1YIR009W VBA2P38358 474 aaKnown RBP2.51□□□□□ -2.01
MSL1YIR009W SMK1P41808 388 aa2.51□□□□□ -2.01
MSL1YIR009W YPT11P48559 417 aa2.51□□□□□ -2.01
MSL1YIR009W ORC5P50874 479 aa2.51□□□□□ -2.01
MSL1YIR009W TRS31Q03337 283 aa2.51□□□□□ -2.01
MSL1YIR009W YTH1Q06102 208 aaPredicted RBP2.51□□□□□ -2.01
MSL1YIR009W GRS2Q06817 618 aa2.51□□□□□ -2.01
MSL1YIR009W BRE1Q07457 700 aaKnown RBP2.51□□□□□ -2.01
MSL1YIR009W YPL191CQ08930 360 aa2.51□□□□□ -2.01
MSL1YIR009W YDR056CQ12025 205 aa2.51□□□□□ -2.01
MSL1YIR009W PSF3Q12146 194 aa2.51□□□□□ -2.01
MSL1YIR009W DBP10Q12389 995 aaKnown RBP2.51□□□□□ -2.01
MSL1YIR009W YOL087CQ99247 1116 aa2.51□□□□□ -2.01
MSL1YIR009W VAS1P07806 1104 aaKnown RBP2.5□□□□□ -2.01
MSL1YIR009W YFL068WP0CX99 160 aa2.5□□□□□ -2.01
MSL1YIR009W YLL066W-AP0CY00 160 aa2.5□□□□□ -2.01
MSL1YIR009W YLL067W-AP0CY01 160 aa2.5□□□□□ -2.01
MSL1YIR009W PSY4P38193 441 aa2.5□□□□□ -2.01
MSL1YIR009W ARN1P38731 627 aa2.5□□□□□ -2.01
MSL1YIR009W MET30P39014 640 aa2.5□□□□□ -2.01
MSL1YIR009W SPC72P39723 622 aa2.5□□□□□ -2.01
MSL1YIR009W NDE1P40215 560 aa2.5□□□□□ -2.01
MSL1YIR009W PSF2P40359 213 aa2.5□□□□□ -2.01
MSL1YIR009W TMA108P40462 946 aa2.5□□□□□ -2.01
MSL1YIR009W MDM1Q01846 1127 aa2.5□□□□□ -2.01
MSL1YIR009W TRS130Q03660 1102 aa2.5□□□□□ -2.01
MSL1YIR009W CRF1Q04930 467 aa2.5□□□□□ -2.01
MSL1YIR009W TRI1Q05024 226 aa2.5□□□□□ -2.01
MSL1YIR009W CIA1Q05583 330 aa2.5□□□□□ -2.01
MSL1YIR009W ECM22Q05958 814 aaPredicted RBP2.5□□□□□ -2.01
MSL1YIR009W NRT1Q08485 598 aa2.5□□□□□ -2.01
MSL1YIR009W ARP7Q12406 477 aa2.5□□□□□ -2.01
MSL1YIR009W ENT1Q12518 454 aa2.5□□□□□ -2.01
MSL1YIR009W PHO2P07269 559 aa2.49□□□□□ -2.01
MSL1YIR009W POL3P15436 1097 aa2.49□□□□□ -2.01
MSL1YIR009W CLB4P24871 460 aa2.49□□□□□ -2.01
MSL1YIR009W RER1P25560 188 aa2.49□□□□□ -2.01
MSL1YIR009W SLC1P33333 303 aa2.49□□□□□ -2.01
MSL1YIR009W ERC1P38767 581 aa2.49□□□□□ -2.01
MSL1YIR009W SWD1P39706 426 aa2.49□□□□□ -2.01
MSL1YIR009W ARB1P40024 610 aaKnown RBP2.49□□□□□ -2.01
MSL1YIR009W VFA1P40080 203 aa2.49□□□□□ -2.01
MSL1YIR009W YIL169CP40442 995 aa2.49□□□□□ -2.01
MSL1YIR009W IMA5P40884 581 aa2.49□□□□□ -2.01
MSL1YIR009W POL31P46957 487 aa2.49□□□□□ -2.01
MSL1YIR009W YRB30P53107 440 aaPredicted RBP2.49□□□□□ -2.01
MSL1YIR009W MEP3P53390 489 aa2.49□□□□□ -2.01
MSL1YIR009W CPR6P53691 371 aaKnown RBP2.49□□□□□ -2.01
MSL1YIR009W MRPL13Q02204 264 aa2.49□□□□□ -2.01
MSL1YIR009W MCM3P24279 971 aaKnown RBP2.48□□□□□ -2.01
MSL1YIR009W SWI4P25302 1093 aaKnown RBP2.48□□□□□ -2.01
MSL1YIR009W PTC6P25646 442 aa2.48□□□□□ -2.01
MSL1YIR009W RPF2P36160 344 aaKnown RBP2.48□□□□□ -2.01
MSL1YIR009W RTT107P38850 1070 aa2.48□□□□□ -2.01
MSL1YIR009W YEL068CP39977 110 aa2.48□□□□□ -2.01
MSL1YIR009W PUG1P40100 303 aa2.48□□□□□ -2.01
MSL1YIR009W CDC1P40986 491 aa2.48□□□□□ -2.01
MSL1YIR009W ARC35P53731 342 aaKnown RBP2.48□□□□□ -2.01
MSL1YIR009W YNL144CP53907 740 aa2.48□□□□□ -2.01
MSL1YIR009W GSH2Q08220 491 aa2.48□□□□□ -2.01
MSL1YIR009W LEA1Q08963 238 aaPredicted RBP2.48□□□□□ -2.01
MSL1YIR009W ILV2P07342 687 aaKnown RBP2.47□□□□□ -2.01
MSL1YIR009W RPL42AP0CX27 106 aaKnown RBP2.47□□□□□ -2.01
MSL1YIR009W RPL42BP0CX28 106 aaKnown RBP2.47□□□□□ -2.01
MSL1YIR009W GUK1P15454 187 aaKnown RBP2.47□□□□□ -2.01
MSL1YIR009W NCP1P16603 691 aaKnown RBP2.47□□□□□ -2.01
MSL1YIR009W PFK2P16862 959 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
MSL1YIR009W SAN1P22470 610 aa2.47□□□□□ -2.01
MSL1YIR009W RPS7AP26786 190 aaKnown RBP2.47□□□□□ -2.01
MSL1YIR009W RRN3P36070 627 aa2.47□□□□□ -2.01
MSL1YIR009W MUD2P36084 527 aaKnown RBP2.47□□□□□ -2.01
MSL1YIR009W JNM1P36224 373 aa2.47□□□□□ -2.01
MSL1YIR009W TAF5P38129 798 aa2.47□□□□□ -2.01
MSL1YIR009W UME6P39001 836 aa2.47□□□□□ -2.01
MSL1YIR009W STT3P39007 718 aaKnown RBP2.47□□□□□ -2.01
MSL1YIR009W TPA1P40032 644 aaKnown RBP2.47□□□□□ -2.01
MSL1YIR009W KAP123P40069 1113 aaKnown RBP2.47□□□□□ -2.01
MSL1YIR009W FAF1P40546 346 aaPredicted RBP2.47□□□□□ -2.01
MSL1YIR009W PUS4P48567 403 aaKnown RBP2.47□□□□□ -2.01
MSL1YIR009W YGL260WP53056 76 aa2.47□□□□□ -2.01
MSL1YIR009W THI3Q07471 609 aa2.47□□□□□ -2.01
MSL1YIR009W RRI2Q12348 645 aa2.47□□□□□ -2.01
MSL1YIR009W CTT1P06115 562 aa2.46□□□□□ -2.02
MSL1YIR009W SNF1P06782 633 aaKnown RBP2.46□□□□□ -2.02
MSL1YIR009W ADE3P07245 946 aaKnown RBP2.46□□□□□ -2.02
MSL1YIR009W MIS1P09440 975 aaKnown RBP2.46□□□□□ -2.02
MSL1YIR009W RIT1P23796 513 aa2.46□□□□□ -2.02
MSL1YIR009W RAD16P31244 790 aa2.46□□□□□ -2.02
MSL1YIR009W MSS51P32335 436 aa2.46□□□□□ -2.02
MSL1YIR009W SIP1P32578 815 aa2.46□□□□□ -2.02
MSL1YIR009W IFA38P38286 347 aa2.46□□□□□ -2.02
MSL1YIR009W VPS41P38959 992 aa2.46□□□□□ -2.02
MSL1YIR009W NPA3P47122 385 aa2.46□□□□□ -2.02
MSL1YIR009W YPR003CP53394 754 aa2.46□□□□□ -2.02
MSL1YIR009W MDG1P53885 366 aa2.46□□□□□ -2.02
MSL1YIR009W CBK1P53894 756 aa2.46□□□□□ -2.02
MSL1YIR009W EAF7P53911 425 aaKnown RBP2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 83.5 ms