RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W IRC22P40006 225 aa2.45□□□□□ -2.02
TRA1YHR099W CHS6P40955 746 aa2.45□□□□□ -2.02
TRA1YHR099W DAK2P43550 591 aa2.45□□□□□ -2.02
TRA1YHR099W RPS7BP48164 190 aaKnown RBP2.45□□□□□ -2.02
TRA1YHR099W YGL036WP53185 909 aaPredicted RBP2.45□□□□□ -2.02
TRA1YHR099W LGE1Q02796 332 aaKnown RBP2.45□□□□□ -2.02
TRA1YHR099W DOT1Q04089 582 aaKnown RBP2.45□□□□□ -2.02
TRA1YHR099W GET4Q12125 312 aa2.45□□□□□ -2.02
TRA1YHR099W DNF2Q12675 1612 aa2.45□□□□□ -2.02
TRA1YHR099W COX2P00410 251 aa2.45□□□□□ -2.02
TRA1YHR099W TPI1P00942 248 aaKnown RBP2.45□□□□□ -2.02
TRA1YHR099W FUM1P08417 488 aaKnown RBP2.45□□□□□ -2.02
TRA1YHR099W MUD1P32605 298 aaKnown RBP2.45□□□□□ -2.02
TRA1YHR099W INP51P40559 946 aaKnown RBP2.45□□□□□ -2.02
TRA1YHR099W IMA5P40884 581 aa2.45□□□□□ -2.02
TRA1YHR099W COG1P53079 417 aa2.45□□□□□ -2.02
TRA1YHR099W YPR091CQ06833 770 aa2.45□□□□□ -2.02
TRA1YHR099W SLD7Q08457 257 aa2.45□□□□□ -2.02
TRA1YHR099W YDR056CQ12025 205 aa2.45□□□□□ -2.02
TRA1YHR099W RRP42Q12277 265 aaPredicted RBP2.45□□□□□ -2.02
TRA1YHR099W BBP1Q12365 385 aa2.45□□□□□ -2.02
TRA1YHR099W GAP1P19145 602 aaPredicted RBP2.45□□□□□ -2.02
TRA1YHR099W DBP1P24784 617 aaKnown RBP2.45□□□□□ -2.02
TRA1YHR099W PCL7P40186 285 aa2.45□□□□□ -2.02
TRA1YHR099W FMC1P40491 155 aa2.45□□□□□ -2.02
TRA1YHR099W PPM1Q04081 328 aa2.45□□□□□ -2.02
TRA1YHR099W PRP11Q07350 266 aaPredicted RBP2.45□□□□□ -2.02
TRA1YHR099W YEH2Q07950 538 aa2.45□□□□□ -2.02
TRA1YHR099W THI20Q08224 551 aa2.45□□□□□ -2.02
TRA1YHR099W HFI1Q12060 488 aa2.45□□□□□ -2.02
TRA1YHR099W PHO13P19881 312 aa2.45□□□□□ -2.02
TRA1YHR099W CAM1P29547 415 aaKnown RBP2.45□□□□□ -2.02
TRA1YHR099W DGR2P32330 852 aa2.45□□□□□ -2.02
TRA1YHR099W NGG1P32494 702 aa2.45□□□□□ -2.02
TRA1YHR099W YJR079WP47126 109 aa2.45□□□□□ -2.02
TRA1YHR099W SRP1Q02821 542 aaKnown RBP2.45□□□□□ -2.02
TRA1YHR099W PSY3Q12318 242 aa2.45□□□□□ -2.02
TRA1YHR099W ERP4Q12450 207 aa2.45□□□□□ -2.02
TRA1YHR099W HIS5P07172 385 aa2.45□□□□□ -2.02
TRA1YHR099W DSF1P0CX08 502 aa2.45□□□□□ -2.02
TRA1YHR099W YNR073CP0CX09 502 aa2.45□□□□□ -2.02
TRA1YHR099W POP5P28005 173 aa2.45□□□□□ -2.02
TRA1YHR099W SOF1P33750 489 aaKnown RBP2.45□□□□□ -2.02
TRA1YHR099W RFC3P38629 340 aa2.45□□□□□ -2.02
TRA1YHR099W PZF1P39933 429 aa2.45□□□□□ -2.02
TRA1YHR099W PXA1P41909 870 aa2.45□□□□□ -2.02
TRA1YHR099W YPL071CQ02864 156 aa2.45□□□□□ -2.02
TRA1YHR099W AAD15Q08361 143 aa2.45□□□□□ -2.02
TRA1YHR099W ATG9Q12142 997 aa2.45□□□□□ -2.02
TRA1YHR099W RIM15P43565 1770 aa2.45□□□□□ -2.02
TRA1YHR099W NAM2P11325 894 aa2.45□□□□□ -2.02
TRA1YHR099W NOP1P15646 327 aaKnown RBP2.45□□□□□ -2.02
TRA1YHR099W URA6P15700 204 aa2.45□□□□□ -2.02
TRA1YHR099W DBP5P20449 482 aaKnown RBP2.45□□□□□ -2.02
TRA1YHR099W PBN1P25580 416 aa2.45□□□□□ -2.02
TRA1YHR099W RFT1P38206 574 aaPredicted RBP2.45□□□□□ -2.02
TRA1YHR099W CCC2P38995 1004 aa2.45□□□□□ -2.02
TRA1YHR099W LAS21P40367 830 aa2.45□□□□□ -2.02
TRA1YHR099W YGL242CP53066 181 aa2.45□□□□□ -2.02
TRA1YHR099W MLH2Q07980 695 aa2.45□□□□□ -2.02
TRA1YHR099W RGT2Q12300 763 aa2.45□□□□□ -2.02
TRA1YHR099W HSP42Q12329 375 aa2.45□□□□□ -2.02
TRA1YHR099W MSW1P04803 379 aa2.45□□□□□ -2.02
TRA1YHR099W DFR1P07807 211 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
TRA1YHR099W GSY1P23337 708 aa2.45□□□□□ -2.02
TRA1YHR099W GCG1P32656 232 aaKnown RBP2.45□□□□□ -2.02
TRA1YHR099W ALY1P36117 915 aa2.45□□□□□ -2.02
TRA1YHR099W MPT5P39016 859 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02 RIP-Chip
TRA1YHR099W TDA2P40045 126 aa2.45□□□□□ -2.02
TRA1YHR099W SIP5P40210 489 aaKnown RBP2.45□□□□□ -2.02
TRA1YHR099W IRC8P47046 822 aa2.45□□□□□ -2.02
TRA1YHR099W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
TRA1YHR099W YGR017WP53210 297 aa2.45□□□□□ -2.02
TRA1YHR099W PKH3Q03306 898 aaPredicted RBP2.45□□□□□ -2.02
TRA1YHR099W YDR239CQ03780 787 aa2.45□□□□□ -2.02
TRA1YHR099W TDA9Q04545 1251 aa2.45□□□□□ -2.02
TRA1YHR099W PRE8P23639 250 aa2.44□□□□□ -2.02
TRA1YHR099W ARE1P25628 610 aa2.44□□□□□ -2.02
TRA1YHR099W YBL086CP38177 466 aa2.44□□□□□ -2.02
TRA1YHR099W VAB2P40003 282 aa2.44□□□□□ -2.02
TRA1YHR099W PFD1P46988 109 aa2.44□□□□□ -2.02
TRA1YHR099W PYK2P52489 506 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W ALT1P52893 592 aa2.44□□□□□ -2.02
TRA1YHR099W VIP1Q06685 1146 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W VAM6Q07468 1049 aa2.44□□□□□ -2.02
TRA1YHR099W YLL007CQ07799 665 aa2.44□□□□□ -2.02
TRA1YHR099W YPL216WQ08964 1102 aa2.44□□□□□ -2.02
TRA1YHR099W YLR125WQ12138 136 aa2.44□□□□□ -2.02
TRA1YHR099W TIP41Q12199 356 aa2.44□□□□□ -2.02
TRA1YHR099W HRT3Q12347 344 aa2.44□□□□□ -2.02
TRA1YHR099W NUP192P47054 1683 aa2.44□□□□□ -2.02
TRA1YHR099W YPT1P01123 206 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W MIS1P09440 975 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W ECM4P36156 370 aa2.44□□□□□ -2.02
TRA1YHR099W MAP2P38174 421 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W RFS1P38234 210 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W SLI15P38283 698 aa2.44□□□□□ -2.02
TRA1YHR099W STB5P38699 743 aa2.44□□□□□ -2.02
TRA1YHR099W YHL041WP38730 149 aa2.44□□□□□ -2.02
TRA1YHR099W SAD1P43589 448 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms