RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W COX1P00401 534 aa3.35□□□□□ -1.87
RPF1YHR088W YJL070CP40361 888 aa3.35□□□□□ -1.87
RPF1YHR088W YNL181WP53878 407 aa3.35□□□□□ -1.87
RPF1YHR088W APL5Q08951 932 aaKnown RBP3.35□□□□□ -1.87
RPF1YHR088W NUR1Q12066 484 aa3.35□□□□□ -1.87
RPF1YHR088W YLR112WQ12130 139 aa3.35□□□□□ -1.87
RPF1YHR088W EFM2P38347 419 aa3.34□□□□□ -1.87
RPF1YHR088W SWD1P39706 426 aa3.34□□□□□ -1.87
RPF1YHR088W ASG1P40467 964 aa3.34□□□□□ -1.87
RPF1YHR088W IML2P47031 731 aa3.34□□□□□ -1.87
RPF1YHR088W YGL036WP53185 909 aaPredicted RBP3.34□□□□□ -1.87
RPF1YHR088W COG6P53959 839 aa3.34□□□□□ -1.87
RPF1YHR088W RVB2Q12464 471 aaKnown RBP3.34□□□□□ -1.87
RPF1YHR088W ADH4P10127 382 aa3.33□□□□□ -1.88
RPF1YHR088W YCR006CP25350 157 aa3.33□□□□□ -1.88
RPF1YHR088W YBR139WP38109 508 aa3.33□□□□□ -1.88
RPF1YHR088W DJP1P40564 432 aa3.33□□□□□ -1.88
RPF1YHR088W ESBP6P53918 673 aa3.33□□□□□ -1.88
RPF1YHR088W YDR109CQ04585 715 aa3.33□□□□□ -1.88
RPF1YHR088W ATG23Q06671 453 aa3.33□□□□□ -1.88
RPF1YHR088W SUI3P09064 285 aaKnown RBP3.32□□□□□ -1.88
RPF1YHR088W PRP16P15938 1071 aaPredicted RBP3.32□□□□□ -1.88
RPF1YHR088W RPN2P32565 945 aaKnown RBP3.32□□□□□ -1.88
RPF1YHR088W RAD24P32641 659 aa3.32□□□□□ -1.88
RPF1YHR088W YOX1P34161 385 aa3.32□□□□□ -1.88
RPF1YHR088W PAF1P38351 445 aa3.32□□□□□ -1.88
RPF1YHR088W DHH1P39517 506 aaKnown RBP3.32□□□□□ -1.88
RPF1YHR088W IMA5P40884 581 aa3.32□□□□□ -1.88
RPF1YHR088W ATG27P46989 271 aa3.32□□□□□ -1.88
RPF1YHR088W MSY1P48527 492 aa3.32□□□□□ -1.88
RPF1YHR088W YGR079WP53249 370 aa3.32□□□□□ -1.88
RPF1YHR088W FCP1Q03254 732 aa3.32□□□□□ -1.88
RPF1YHR088W YLR455WQ06188 304 aa3.32□□□□□ -1.88
RPF1YHR088W FRE3Q08905 711 aa3.32□□□□□ -1.88
RPF1YHR088W TMA17Q12513 150 aa3.32□□□□□ -1.88
RPF1YHR088W GPA1P08539 472 aa3.31□□□□□ -1.88
RPF1YHR088W HNM1P19807 563 aa3.31□□□□□ -1.88
RPF1YHR088W YEN1P40028 759 aa3.31□□□□□ -1.88
RPF1YHR088W ROK1P45818 564 aaPredicted RBP3.31□□□□□ -1.88
RPF1YHR088W ASK10P48361 1146 aa3.31□□□□□ -1.88
RPF1YHR088W IMP4P53941 290 aaKnown RBP3.31□□□□□ -1.88
RPF1YHR088W YLR352WQ06479 807 aa3.31□□□□□ -1.88
RPF1YHR088W YLR049CQ12110 428 aa3.31□□□□□ -1.88
RPF1YHR088W ARP7Q12406 477 aa3.31□□□□□ -1.88
RPF1YHR088W CBP1P07252 654 aa3.3□□□□□ -1.88
RPF1YHR088W YML002WP0CF17 737 aa3.3□□□□□ -1.88
RPF1YHR088W PMS1P14242 873 aa3.3□□□□□ -1.88
RPF1YHR088W GUK1P15454 187 aaKnown RBP3.3□□□□□ -1.88
RPF1YHR088W SEC1P30619 724 aaKnown RBP3.3□□□□□ -1.88
RPF1YHR088W FRD1P32614 470 aaKnown RBP3.3□□□□□ -1.88
RPF1YHR088W CAB2P40506 365 aa3.3□□□□□ -1.88
RPF1YHR088W PEX14P53112 341 aa3.3□□□□□ -1.88
RPF1YHR088W RSF1Q05043 376 aa3.3□□□□□ -1.88
RPF1YHR088W UTP21Q06078 939 aaPredicted RBP3.3□□□□□ -1.88
RPF1YHR088W TIP41Q12199 356 aa3.3□□□□□ -1.88
RPF1YHR088W URK1P27515 501 aa3.29□□□□□ -1.88
RPF1YHR088W YPK3P38070 525 aa3.29□□□□□ -1.88
RPF1YHR088W LEU5P38702 357 aa3.29□□□□□ -1.88
RPF1YHR088W ATG21Q02887 496 aa3.29□□□□□ -1.88
RPF1YHR088W CYB2P00175 591 aa3.28□□□□□ -1.88
RPF1YHR088W BIK1P11709 440 aa3.28□□□□□ -1.88
RPF1YHR088W TFC4P33339 1025 aa3.28□□□□□ -1.88
RPF1YHR088W ENP1P38333 483 aaKnown RBP3.28□□□□□ -1.88
RPF1YHR088W BUD16P39988 312 aa3.28□□□□□ -1.88
RPF1YHR088W YJR061WP40355 935 aa3.28□□□□□ -1.88
RPF1YHR088W IAH1P41734 238 aa3.28□□□□□ -1.88
RPF1YHR088W DCP2P53550 970 aaKnown RBP3.28□□□□□ -1.88
RPF1YHR088W MTG1Q03151 367 aaPredicted RBP3.28□□□□□ -1.88
RPF1YHR088W CTL1Q03220 320 aaKnown RBP3.28□□□□□ -1.88
RPF1YHR088W MCP2Q06567 569 aa3.28□□□□□ -1.88
RPF1YHR088W SIR1P21691 654 aa3.27□□□□□ -1.89
RPF1YHR088W MCM3P24279 971 aaKnown RBP3.27□□□□□ -1.89
RPF1YHR088W MRC1P25588 1096 aa3.27□□□□□ -1.89
RPF1YHR088W MSH1P25846 959 aa3.27□□□□□ -1.89
RPF1YHR088W GRX4P32642 244 aa3.27□□□□□ -1.89
RPF1YHR088W YNL234WP53857 426 aa3.27□□□□□ -1.89
RPF1YHR088W ARP10Q04549 284 aa3.27□□□□□ -1.89
RPF1YHR088W SMA2Q04658 369 aa3.27□□□□□ -1.89
RPF1YHR088W ICL2Q12031 575 aa3.27□□□□□ -1.89
RPF1YHR088W PCT1P13259 424 aa3.26□□□□□ -1.89
RPF1YHR088W GCD7P32502 381 aaPredicted RBP3.26□□□□□ -1.89
RPF1YHR088W YJR120WP47157 116 aa3.26□□□□□ -1.89
RPF1YHR088W ADE16P54113 591 aaKnown RBP3.26□□□□□ -1.89
RPF1YHR088W YBR298C-AQ8TGK4 73 aa3.26□□□□□ -1.89
RPF1YHR088W PGI1P12709 554 aaKnown RBP3.25□□□□□ -1.89
RPF1YHR088W STE50P25344 346 aa3.25□□□□□ -1.89
RPF1YHR088W MGR1P25573 417 aa3.25□□□□□ -1.89
RPF1YHR088W LRE1P25579 583 aaKnown RBP3.25□□□□□ -1.89
RPF1YHR088W CPR3P25719 182 aa3.25□□□□□ -1.89
RPF1YHR088W PRO3P32263 286 aaKnown RBP3.25□□□□□ -1.89
RPF1YHR088W TRS65P32893 560 aa3.25□□□□□ -1.89
RPF1YHR088W STT3P39007 718 aaKnown RBP3.25□□□□□ -1.89
RPF1YHR088W YIR014WP40570 242 aa3.25□□□□□ -1.89
RPF1YHR088W ASI1P54074 624 aa3.25□□□□□ -1.89
RPF1YHR088W YMR178WQ03219 274 aaKnown RBP3.25□□□□□ -1.89
RPF1YHR088W PET122P10355 254 aa3.24□□□□□ -1.89
RPF1YHR088W RIM2P38127 377 aa3.24□□□□□ -1.89
RPF1YHR088W PSR2Q07949 397 aa3.24□□□□□ -1.89
RPF1YHR088W RSA1Q08932 381 aa3.24□□□□□ -1.89
RPF1YHR088W YER145C-AA0A023PYF4 145 aa3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms