RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A YGR079WP53249 370 aa3.74□□□□□ -1.81
EFG1YGR271C-A VMS1Q04311 632 aaKnown RBP3.74□□□□□ -1.81
EFG1YGR271C-A EIS1Q05050 843 aaKnown RBP3.74□□□□□ -1.81
EFG1YGR271C-A NKP1Q12493 238 aa3.74□□□□□ -1.81
EFG1YGR271C-A COX1P00401 534 aa3.73□□□□□ -1.81
EFG1YGR271C-A RPL42AP0CX27 106 aaKnown RBP3.73□□□□□ -1.81
EFG1YGR271C-A RPL42BP0CX28 106 aaKnown RBP3.73□□□□□ -1.81
EFG1YGR271C-A ASK10P48361 1146 aa3.73□□□□□ -1.81
EFG1YGR271C-A GIS2P53849 153 aaKnown RBP RIP-Chip data3.73□□□□□ -1.81not detected
EFG1YGR271C-A ARP9Q05123 467 aa3.73□□□□□ -1.81
EFG1YGR271C-A MCH4Q08268 501 aa3.73□□□□□ -1.81
EFG1YGR271C-A NRT1Q08485 598 aa3.73□□□□□ -1.81
EFG1YGR271C-A BIK1P11709 440 aa3.72□□□□□ -1.81
EFG1YGR271C-A PCT1P13259 424 aa3.72□□□□□ -1.81
EFG1YGR271C-A SIR1P21691 654 aa3.72□□□□□ -1.81
EFG1YGR271C-A MFT1P33441 392 aaKnown RBP3.72□□□□□ -1.81
EFG1YGR271C-A FUI1P38196 639 aa3.72□□□□□ -1.81
EFG1YGR271C-A RKM3P38222 552 aa3.72□□□□□ -1.81
EFG1YGR271C-A EFM2P38347 419 aa3.72□□□□□ -1.81
EFG1YGR271C-A STT3P39007 718 aaKnown RBP3.72□□□□□ -1.81
EFG1YGR271C-A QRI7P43122 407 aa3.72□□□□□ -1.81
EFG1YGR271C-A MSY1P48527 492 aa3.72□□□□□ -1.81
EFG1YGR271C-A HOS2P53096 452 aaPredicted RBP3.72□□□□□ -1.81
EFG1YGR271C-A SWF1Q04629 336 aa3.72□□□□□ -1.81
EFG1YGR271C-A YMR317WQ04893 1140 aa3.72□□□□□ -1.81
EFG1YGR271C-A ICL2Q12031 575 aa3.72□□□□□ -1.81
EFG1YGR271C-A TRX2P22803 104 aaKnown RBP3.71□□□□□ -1.82
EFG1YGR271C-A NOC2P39744 710 aaKnown RBP3.71□□□□□ -1.82
EFG1YGR271C-A VPS27P40343 622 aaKnown RBP3.71□□□□□ -1.82
EFG1YGR271C-A PEX8P53248 589 aa3.71□□□□□ -1.82
EFG1YGR271C-A GIR2Q03768 265 aaPredicted RBP3.71□□□□□ -1.82
EFG1YGR271C-A BAG7Q12128 409 aa3.71□□□□□ -1.82
EFG1YGR271C-A GPA1P08539 472 aa3.7□□□□□ -1.82
EFG1YGR271C-A CDC23P16522 626 aa3.7□□□□□ -1.82
EFG1YGR271C-A URK1P27515 501 aa3.7□□□□□ -1.82
EFG1YGR271C-A LEU5P38702 357 aa3.7□□□□□ -1.82
EFG1YGR271C-A FUN12P39730 1002 aaKnown RBP3.7□□□□□ -1.82
EFG1YGR271C-A MAD3P47074 515 aa3.7□□□□□ -1.82
EFG1YGR271C-A UBP8P50102 471 aa3.7□□□□□ -1.82
EFG1YGR271C-A TGL2P54857 326 aa3.7□□□□□ -1.82
EFG1YGR271C-A YPL108WQ02872 168 aaPredicted RBP3.7□□□□□ -1.82
EFG1YGR271C-A RTT103Q05543 409 aa3.7□□□□□ -1.82
EFG1YGR271C-A ECI1Q05871 280 aa3.7□□□□□ -1.82
EFG1YGR271C-A COG4Q06096 861 aa3.7□□□□□ -1.82
EFG1YGR271C-A GPN2Q08726 347 aaPredicted RBP3.7□□□□□ -1.82
EFG1YGR271C-A APL5Q08951 932 aaKnown RBP3.7□□□□□ -1.82
EFG1YGR271C-A PPZ1P26570 692 aa3.69□□□□□ -1.82
EFG1YGR271C-A MPE1P35728 441 aaKnown RBP3.69□□□□□ -1.82
EFG1YGR271C-A VPS25P47142 202 aa3.69□□□□□ -1.82
EFG1YGR271C-A IMA1P53051 589 aa3.69□□□□□ -1.82
EFG1YGR271C-A TAM41P53230 385 aa3.69□□□□□ -1.82
EFG1YGR271C-A DIG1Q03063 452 aaKnown RBP3.69□□□□□ -1.82
EFG1YGR271C-A YMR230W-AQ3E7B5 62 aa3.69□□□□□ -1.82
EFG1YGR271C-A RPT2P40327 437 aaKnown RBP3.68□□□□□ -1.82
EFG1YGR271C-A ASG1P40467 964 aa3.68□□□□□ -1.82
EFG1YGR271C-A YGL260WP53056 76 aa3.68□□□□□ -1.82
EFG1YGR271C-A YGL036WP53185 909 aaPredicted RBP3.68□□□□□ -1.82
EFG1YGR271C-A IZH1Q03419 316 aa3.68□□□□□ -1.82
EFG1YGR271C-A ATG16Q03818 150 aa3.68□□□□□ -1.82
EFG1YGR271C-A POS5Q06892 414 aa3.68□□□□□ -1.82
EFG1YGR271C-A FRE3Q08905 711 aa3.68□□□□□ -1.82
EFG1YGR271C-A RVB2Q12464 471 aaKnown RBP3.68□□□□□ -1.82
EFG1YGR271C-A TMA7Q3E764 64 aaKnown RBP3.68□□□□□ -1.82
EFG1YGR271C-A ATP4P05626 244 aa3.67□□□□□ -1.82
EFG1YGR271C-A FMP46P36141 133 aaKnown RBP3.67□□□□□ -1.82
EFG1YGR271C-A CAB2P40506 365 aa3.67□□□□□ -1.82
EFG1YGR271C-A DJP1P40564 432 aa3.67□□□□□ -1.82
EFG1YGR271C-A UBX6P47049 396 aa3.67□□□□□ -1.82
EFG1YGR271C-A YGR021WP53212 290 aa3.67□□□□□ -1.82
EFG1YGR271C-A SVL3Q03088 825 aaKnown RBP3.67□□□□□ -1.82
EFG1YGR271C-A SND1Q04007 877 aa3.67□□□□□ -1.82
EFG1YGR271C-A YMR254CQ04838 102 aa3.67□□□□□ -1.82
EFG1YGR271C-A FMP42Q04991 504 aa3.67□□□□□ -1.82
EFG1YGR271C-A YLR455WQ06188 304 aa3.67□□□□□ -1.82
EFG1YGR271C-A ATG23Q06671 453 aa3.67□□□□□ -1.82
EFG1YGR271C-A YLR112WQ12130 139 aa3.67□□□□□ -1.82
EFG1YGR271C-A SUL2Q12325 893 aa3.67□□□□□ -1.82
EFG1YGR271C-A MRP2P10663 115 aaPredicted RBP3.66□□□□□ -1.82
EFG1YGR271C-A YSP3P25036 478 aa3.66□□□□□ -1.82
EFG1YGR271C-A RPN12P32496 274 aa3.66□□□□□ -1.82
EFG1YGR271C-A TOA1P32773 286 aa3.66□□□□□ -1.82
EFG1YGR271C-A VRG4P40107 337 aa3.66□□□□□ -1.82
EFG1YGR271C-A IML2P47031 731 aa3.66□□□□□ -1.82
EFG1YGR271C-A ESBP6P53918 673 aa3.66□□□□□ -1.82
EFG1YGR271C-A YDR109CQ04585 715 aa3.66□□□□□ -1.82
EFG1YGR271C-A SCW10Q04951 389 aa3.66□□□□□ -1.82
EFG1YGR271C-A STE50P25344 346 aa3.65□□□□□ -1.83
EFG1YGR271C-A LRE1P25579 583 aaKnown RBP3.65□□□□□ -1.83
EFG1YGR271C-A SEC1P30619 724 aaKnown RBP3.65□□□□□ -1.83
EFG1YGR271C-A GEX2P36173 615 aa3.65□□□□□ -1.83
EFG1YGR271C-A SAD1P43589 448 aa3.65□□□□□ -1.83
EFG1YGR271C-A ADE16P54113 591 aaKnown RBP3.65□□□□□ -1.83
EFG1YGR271C-A NYV1Q12255 253 aa3.65□□□□□ -1.83
EFG1YGR271C-A YML003WP0CF16 290 aa3.64□□□□□ -1.83
EFG1YGR271C-A YEF3P16521 1044 aaKnown RBP3.64□□□□□ -1.83
EFG1YGR271C-A RIT1P23796 513 aa3.64□□□□□ -1.83
EFG1YGR271C-A BZZ1P38822 633 aa3.64□□□□□ -1.83
EFG1YGR271C-A IES5P40060 125 aa3.64□□□□□ -1.83
EFG1YGR271C-A SKP2P42843 763 aa3.64□□□□□ -1.83
EFG1YGR271C-A CUL3P53202 744 aa3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms