RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W RRT6P53117 311 aaPredicted RBP1.66□□□□□ -2.14
CUL3YGR003W IOC4Q04213 475 aa1.66□□□□□ -2.14
CUL3YGR003W YPL191CQ08930 360 aa1.66□□□□□ -2.14
CUL3YGR003W LEA1Q08963 238 aaPredicted RBP1.66□□□□□ -2.14
CUL3YGR003W RPL42AP0CX27 106 aaKnown RBP1.65□□□□□ -2.15
CUL3YGR003W RPL42BP0CX28 106 aaKnown RBP1.65□□□□□ -2.15
CUL3YGR003W BIK1P11709 440 aa1.65□□□□□ -2.15
CUL3YGR003W AIM17P23180 465 aaKnown RBP1.65□□□□□ -2.15
CUL3YGR003W IFA38P38286 347 aa1.65□□□□□ -2.15
CUL3YGR003W NOP2P40991 618 aaKnown RBP1.65□□□□□ -2.15
CUL3YGR003W YJR008WP47085 338 aa1.65□□□□□ -2.15
CUL3YGR003W MSY1P48527 492 aa1.65□□□□□ -2.15
CUL3YGR003W YGL036WP53185 909 aaPredicted RBP1.65□□□□□ -2.15
CUL3YGR003W EAF7P53911 425 aaKnown RBP1.65□□□□□ -2.15
CUL3YGR003W BOP3P53958 396 aa1.65□□□□□ -2.15
CUL3YGR003W ADE16P54113 591 aaKnown RBP1.65□□□□□ -2.15
CUL3YGR003W CHO1P08456 276 aa1.64□□□□□ -2.15
CUL3YGR003W GPA1P08539 472 aa1.64□□□□□ -2.15
CUL3YGR003W PET122P10355 254 aa1.64□□□□□ -2.15
CUL3YGR003W PDE1P22434 369 aa1.64□□□□□ -2.15
CUL3YGR003W CNA1P23287 553 aa1.64□□□□□ -2.15
CUL3YGR003W SIP1P32578 815 aa1.64□□□□□ -2.15
CUL3YGR003W RPT3P33298 428 aaKnown RBP1.64□□□□□ -2.15
CUL3YGR003W RPF2P36160 344 aaKnown RBP1.64□□□□□ -2.15
CUL3YGR003W RAD26P40352 1085 aa1.64□□□□□ -2.15
CUL3YGR003W ZAP1P47043 880 aa1.64□□□□□ -2.15
CUL3YGR003W BNA1P47096 177 aa1.64□□□□□ -2.15
CUL3YGR003W YNR061CP53747 219 aa1.64□□□□□ -2.15
CUL3YGR003W YDR109CQ04585 715 aa1.64□□□□□ -2.15
CUL3YGR003W GTB1Q04924 702 aa1.64□□□□□ -2.15
CUL3YGR003W VAM6Q07468 1049 aa1.64□□□□□ -2.15
CUL3YGR003W THI3Q07471 609 aa1.64□□□□□ -2.15
CUL3YGR003W ATP4P05626 244 aa1.64□□□□□ -2.15
CUL3YGR003W ILV2P07342 687 aaKnown RBP1.64□□□□□ -2.15
CUL3YGR003W CLB4P24871 460 aa1.64□□□□□ -2.15
CUL3YGR003W MSH1P25846 959 aa1.64□□□□□ -2.15
CUL3YGR003W FMP46P36141 133 aaKnown RBP1.64□□□□□ -2.15
CUL3YGR003W YIL152WP40455 235 aa1.64□□□□□ -2.15
CUL3YGR003W YIR016WP40572 265 aa1.64□□□□□ -2.15
CUL3YGR003W MDV1P47025 714 aa1.64□□□□□ -2.15
CUL3YGR003W YOL159CQ08300 171 aa1.64□□□□□ -2.15
CUL3YGR003W FRE3Q08905 711 aa1.64□□□□□ -2.15
CUL3YGR003W RRP6Q12149 733 aaKnown RBP1.64□□□□□ -2.15
CUL3YGR003W PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.64□□□□□ -2.15not detected
CUL3YGR003W NYV1Q12255 253 aa1.64□□□□□ -2.15
CUL3YGR003W RVB2Q12464 471 aaKnown RBP1.64□□□□□ -2.15
CUL3YGR003W RRI1Q12468 440 aa1.64□□□□□ -2.15
CUL3YGR003W ILS1P09436 1072 aaKnown RBP1.63□□□□□ -2.15
CUL3YGR003W UBP13P38187 747 aa1.63□□□□□ -2.15
CUL3YGR003W ARN1P38731 627 aa1.63□□□□□ -2.15
CUL3YGR003W ACA1P39970 489 aa1.63□□□□□ -2.15
CUL3YGR003W YPL108WQ02872 168 aaPredicted RBP1.63□□□□□ -2.15
CUL3YGR003W ATG21Q02887 496 aa1.63□□□□□ -2.15
CUL3YGR003W PIG1Q06216 648 aa1.63□□□□□ -2.15
CUL3YGR003W YFL068WP0CX99 160 aa1.63□□□□□ -2.15
CUL3YGR003W YLL066W-AP0CY00 160 aa1.63□□□□□ -2.15
CUL3YGR003W YLL067W-AP0CY01 160 aa1.63□□□□□ -2.15
CUL3YGR003W SRP54P20424 541 aaKnown RBP1.63□□□□□ -2.15
CUL3YGR003W LEU5P38702 357 aa1.63□□□□□ -2.15
CUL3YGR003W PSD1P39006 500 aa1.63□□□□□ -2.15
CUL3YGR003W SWP82P43554 623 aa1.63□□□□□ -2.15
CUL3YGR003W YPT11P48559 417 aa1.63□□□□□ -2.15
CUL3YGR003W ORC5P50874 479 aa1.63□□□□□ -2.15
CUL3YGR003W TRS130Q03660 1102 aa1.63□□□□□ -2.15
CUL3YGR003W ECM16Q04217 1267 aaKnown RBP1.63□□□□□ -2.15
CUL3YGR003W YLR112WQ12130 139 aa1.63□□□□□ -2.15
CUL3YGR003W PET111P08468 800 aa1.62□□□□□ -2.15
CUL3YGR003W PGI1P12709 554 aaKnown RBP1.62□□□□□ -2.15
CUL3YGR003W YCL049CP25577 312 aa1.62□□□□□ -2.15
CUL3YGR003W LRE1P25579 583 aaKnown RBP1.62□□□□□ -2.15
CUL3YGR003W DBF20P32328 564 aa1.62□□□□□ -2.15
CUL3YGR003W OCT1P35999 772 aa1.62□□□□□ -2.15
CUL3YGR003W FSH1P38777 243 aaKnown RBP1.62□□□□□ -2.15
CUL3YGR003W FUN12P39730 1002 aaKnown RBP1.62□□□□□ -2.15
CUL3YGR003W MTG1Q03151 367 aaPredicted RBP1.62□□□□□ -2.15
CUL3YGR003W YMR317WQ04893 1140 aa1.62□□□□□ -2.15
CUL3YGR003W YMR034CQ05131 434 aaPredicted RBP1.62□□□□□ -2.15
CUL3YGR003W ECM22Q05958 814 aaPredicted RBP1.62□□□□□ -2.15
CUL3YGR003W PDR8Q06149 701 aa1.62□□□□□ -2.15
CUL3YGR003W COX17Q12287 69 aa1.62□□□□□ -2.15
CUL3YGR003W MIS1P09440 975 aaKnown RBP1.62□□□□□ -2.15
CUL3YGR003W MSM1P22438 575 aa1.62□□□□□ -2.15
CUL3YGR003W YCR006CP25350 157 aa1.62□□□□□ -2.15
CUL3YGR003W YCR043CP25361 127 aa1.62□□□□□ -2.15
CUL3YGR003W ADE17P38009 592 aaKnown RBP1.62□□□□□ -2.15
CUL3YGR003W IES5P40060 125 aa1.62□□□□□ -2.15
CUL3YGR003W YRB30P53107 440 aaPredicted RBP1.62□□□□□ -2.15
CUL3YGR003W UBX4P54730 416 aa1.62□□□□□ -2.15
CUL3YGR003W MAK10Q02197 733 aa1.62□□□□□ -2.15
CUL3YGR003W DIG1Q03063 452 aaKnown RBP1.62□□□□□ -2.15
CUL3YGR003W TY2A-LR1P0C2J4 438 aa1.61□□□□□ -2.15
CUL3YGR003W TY2A-FP0CX61 438 aa1.61□□□□□ -2.15
CUL3YGR003W TY2A-GR2P0CX62 438 aa1.61□□□□□ -2.15
CUL3YGR003W TY2A-CP25383 438 aa1.61□□□□□ -2.15
CUL3YGR003W FAA2P39518 744 aa1.61□□□□□ -2.15
CUL3YGR003W TPA1P40032 644 aaKnown RBP1.61□□□□□ -2.15
CUL3YGR003W HXT9P40885 567 aa1.61□□□□□ -2.15
CUL3YGR003W UBX6P47049 396 aa1.61□□□□□ -2.15
CUL3YGR003W COG1P53079 417 aa1.61□□□□□ -2.15
CUL3YGR003W CSL4P53859 292 aaPredicted RBP1.61□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 29 ms