RNA–Protein interactions for RNA: YDR313C

PIB1, Transcript of RING-type ubiquitin ligase of the endosomal and vacuolar membranes, yeast

Gene PIB1, Length 861 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIB1	YDR313C	GND1	P38720	489 aa	Known RBP	4.62	□□□□□ -1.67
PIB1	YDR313C	ASG1	P40467	964 aa		4.62	□□□□□ -1.67
PIB1	YDR313C	YPR003C	P53394	754 aa		4.62	□□□□□ -1.67
PIB1	YDR313C	PAP2	P53632	584 aa	Known RBP	4.62	□□□□□ -1.67
PIB1	YDR313C	SWF1	Q04629	336 aa		4.62	□□□□□ -1.67
PIB1	YDR313C	MCH4	Q08268	501 aa		4.62	□□□□□ -1.67
PIB1	YDR313C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
PIB1	YDR313C	GAL1	P04385	528 aa		4.61	□□□□□ -1.67
PIB1	YDR313C	MSS18	P08593	268 aa		4.61	□□□□□ -1.67
PIB1	YDR313C	LRE1	P25579	583 aa	Known RBP	4.61	□□□□□ -1.67
PIB1	YDR313C	MSH1	P25846	959 aa		4.61	□□□□□ -1.67
PIB1	YDR313C	ARP2	P32381	391 aa	Known RBP	4.61	□□□□□ -1.67
PIB1	YDR313C	GRX7	P38068	203 aa		4.61	□□□□□ -1.67
PIB1	YDR313C	HIS6	P40545	261 aa		4.61	□□□□□ -1.67
PIB1	YDR313C	FAF1	P40546	346 aa	Predicted RBP	4.61	□□□□□ -1.67
PIB1	YDR313C	YLR281C	Q05863	155 aa		4.61	□□□□□ -1.67
PIB1	YDR313C	MLH2	Q07980	695 aa		4.61	□□□□□ -1.67
PIB1	YDR313C	GSH2	Q08220	491 aa		4.61	□□□□□ -1.67
PIB1	YDR313C	NEW1	Q08972	1196 aa	Known RBP	4.61	□□□□□ -1.67
PIB1	YDR313C	RRP6	Q12149	733 aa	Known RBP	4.61	□□□□□ -1.67
PIB1	YDR313C	MRP2	P10663	115 aa	Predicted RBP	4.6	□□□□□ -1.67
PIB1	YDR313C	VPS41	P38959	992 aa		4.6	□□□□□ -1.67
PIB1	YDR313C	CAC2	Q04199	468 aa		4.6	□□□□□ -1.67
PIB1	YDR313C	PCL6	P40038	420 aa		4.59	□□□□□ -1.67
PIB1	YDR313C	VPS25	P47142	202 aa		4.59	□□□□□ -1.67
PIB1	YDR313C	TAM41	P53230	385 aa		4.59	□□□□□ -1.67
PIB1	YDR313C	DCP2	P53550	970 aa	Known RBP	4.59	□□□□□ -1.67
PIB1	YDR313C	GRS2	Q06817	618 aa		4.59	□□□□□ -1.67
PIB1	YDR313C	SUI3	P09064	285 aa	Known RBP	4.58	□□□□□ -1.68
PIB1	YDR313C	SPC72	P39723	622 aa		4.58	□□□□□ -1.68
PIB1	YDR313C	ECI1	Q05871	280 aa		4.58	□□□□□ -1.68
PIB1	YDR313C	PCT1	P13259	424 aa		4.57	□□□□□ -1.68
PIB1	YDR313C	SPO16	P17122	198 aa		4.57	□□□□□ -1.68
PIB1	YDR313C	SWI4	P25302	1093 aa	Known RBP	4.57	□□□□□ -1.68
PIB1	YDR313C	ARC40	P38328	384 aa	Known RBP	4.57	□□□□□ -1.68
PIB1	YDR313C	YAT2	P40017	923 aa		4.57	□□□□□ -1.68
PIB1	YDR313C	ADE16	P54113	591 aa	Known RBP	4.57	□□□□□ -1.68
PIB1	YDR313C	MOT3	P54785	490 aa	Known RBP	4.57	□□□□□ -1.68
PIB1	YDR313C	TRS130	Q03660	1102 aa		4.57	□□□□□ -1.68
PIB1	YDR313C	POS5	Q06892	414 aa		4.57	□□□□□ -1.68
PIB1	YDR313C	YOR111W	Q99210	232 aa		4.57	□□□□□ -1.68
PIB1	YDR313C	YML003W	P0CF16	290 aa		4.56	□□□□□ -1.68
PIB1	YDR313C	YCR006C	P25350	157 aa		4.56	□□□□□ -1.68
PIB1	YDR313C	YCR043C	P25361	127 aa		4.56	□□□□□ -1.68
PIB1	YDR313C	GCS1	P35197	352 aa		4.56	□□□□□ -1.68
PIB1	YDR313C	NUP120	P35729	1037 aa		4.56	□□□□□ -1.68
PIB1	YDR313C	RKM3	P38222	552 aa		4.56	□□□□□ -1.68
PIB1	YDR313C	NPR3	P38742	1146 aa		4.56	□□□□□ -1.68
PIB1	YDR313C	TES1	P41903	349 aa	Known RBP	4.56	□□□□□ -1.68
PIB1	YDR313C	ZAP1	P47043	880 aa		4.56	□□□□□ -1.68
PIB1	YDR313C	YLR455W	Q06188	304 aa		4.56	□□□□□ -1.68
PIB1	YDR313C	HIM1	Q06674	414 aa		4.56	□□□□□ -1.68
PIB1	YDR313C	VAM6	Q07468	1049 aa		4.56	□□□□□ -1.68
PIB1	YDR313C	SWT1	Q12104	458 aa		4.56	□□□□□ -1.68
PIB1	YDR313C	YFL068W	P0CX99	160 aa		4.55	□□□□□ -1.68
PIB1	YDR313C	YLL066W-A	P0CY00	160 aa		4.55	□□□□□ -1.68
PIB1	YDR313C	YLL067W-A	P0CY01	160 aa		4.55	□□□□□ -1.68
PIB1	YDR313C	PHO81	P17442	1178 aa		4.55	□□□□□ -1.68
PIB1	YDR313C	YIL161W	P40449	235 aa	Known RBP	4.55	□□□□□ -1.68
PIB1	YDR313C	YLR049C	Q12110	428 aa		4.55	□□□□□ -1.68
PIB1	YDR313C	GPA1	P08539	472 aa		4.54	□□□□□ -1.68
PIB1	YDR313C	CLB4	P24871	460 aa		4.54	□□□□□ -1.68
PIB1	YDR313C	RFA2	P26754	273 aa	Known RBP	4.54	□□□□□ -1.68
PIB1	YDR313C	MRPL36	P36531	177 aa		4.54	□□□□□ -1.68
PIB1	YDR313C	YHL041W	P38730	149 aa		4.54	□□□□□ -1.68
PIB1	YDR313C	RTT107	P38850	1070 aa		4.54	□□□□□ -1.68
PIB1	YDR313C	PUG1	P40100	303 aa		4.54	□□□□□ -1.68
PIB1	YDR313C	YMR034C	Q05131	434 aa	Predicted RBP	4.54	□□□□□ -1.68
PIB1	YDR313C	YSP3	P25036	478 aa		4.53	□□□□□ -1.68
PIB1	YDR313C	RGT1	P32862	1170 aa		4.53	□□□□□ -1.68
PIB1	YDR313C	GEX2	P36173	615 aa		4.53	□□□□□ -1.68
PIB1	YDR313C	YBR138C	P38277	524 aa		4.53	□□□□□ -1.68
PIB1	YDR313C	MET30	P39014	640 aa		4.53	□□□□□ -1.68
PIB1	YDR313C	YIL169C	P40442	995 aa		4.53	□□□□□ -1.68
PIB1	YDR313C	RPN11	P43588	306 aa	Known RBP	4.53	□□□□□ -1.68
PIB1	YDR313C	GPN2	Q08726	347 aa	Predicted RBP	4.53	□□□□□ -1.68
PIB1	YDR313C	MNN2	P38069	597 aa		4.52	□□□□□ -1.69
PIB1	YDR313C	MRX1	P40050	688 aa		4.52	□□□□□ -1.69
PIB1	YDR313C	ERR3	P42222	437 aa		4.52	□□□□□ -1.69
PIB1	YDR313C	BET4	Q00618	327 aa		4.52	□□□□□ -1.69
PIB1	YDR313C	SWA2	Q06677	668 aa		4.52	□□□□□ -1.69
PIB1	YDR313C	FRE3	Q08905	711 aa		4.52	□□□□□ -1.69
PIB1	YDR313C	NYV1	Q12255	253 aa		4.52	□□□□□ -1.69
PIB1	YDR313C	AAP1	P37898	856 aa	Known RBP	4.51	□□□□□ -1.69
PIB1	YDR313C	EXO84	P38261	753 aa		4.51	□□□□□ -1.69
PIB1	YDR313C	YGL036W	P53185	909 aa	Predicted RBP	4.51	□□□□□ -1.69
PIB1	YDR313C	ARP9	Q05123	467 aa		4.51	□□□□□ -1.69
PIB1	YDR313C	NDD1	Q08887	554 aa		4.51	□□□□□ -1.69
PIB1	YDR313C	RPL42A	P0CX27	106 aa	Known RBP	4.5	□□□□□ -1.69
PIB1	YDR313C	RPL42B	P0CX28	106 aa	Known RBP	4.5	□□□□□ -1.69
PIB1	YDR313C	SRP54	P20424	541 aa	Known RBP	4.5	□□□□□ -1.69
PIB1	YDR313C	STE50	P25344	346 aa		4.5	□□□□□ -1.69
PIB1	YDR313C	LHS1	P36016	881 aa		4.5	□□□□□ -1.69
PIB1	YDR313C	CCT4	P39078	528 aa	Known RBP	4.5	□□□□□ -1.69
PIB1	YDR313C	ASE1	P50275	885 aa		4.5	□□□□□ -1.69
PIB1	YDR313C	CSL4	P53859	292 aa	Predicted RBP	4.5	□□□□□ -1.69
PIB1	YDR313C	YLR112W	Q12130	139 aa		4.5	□□□□□ -1.69
PIB1	YDR313C	ATP2	P00830	511 aa	Known RBP	4.49	□□□□□ -1.69
PIB1	YDR313C	YEF3	P16521	1044 aa	Known RBP	4.49	□□□□□ -1.69
PIB1	YDR313C	YCL049C	P25577	312 aa		4.49	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 49.8 ms