RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPR28	YDR218C	MAD2	P40958	196 aa		4.81	□□□□□ -1.64
SPR28	YDR218C	LAM5	P43560	674 aa		4.81	□□□□□ -1.64
SPR28	YDR218C	AGX1	P43567	385 aa		4.81	□□□□□ -1.64
SPR28	YDR218C	NUP84	P52891	726 aa		4.81	□□□□□ -1.64
SPR28	YDR218C	MNT2	P53059	558 aa		4.81	□□□□□ -1.64
SPR28	YDR218C	YNR071C	P53757	342 aa		4.81	□□□□□ -1.64
SPR28	YDR218C	RAD30	Q04049	632 aa		4.81	□□□□□ -1.64
SPR28	YDR218C	RCO1	Q04779	684 aa		4.81	□□□□□ -1.64
SPR28	YDR218C	NUS1	Q12063	375 aa		4.81	□□□□□ -1.64
SPR28	YDR218C	SPE3	Q12074	293 aa	Known RBP	4.81	□□□□□ -1.64
SPR28	YDR218C	RUD3	Q12234	484 aa	Known RBP	4.81	□□□□□ -1.64
SPR28	YDR218C	TUB3	P09734	445 aa	Known RBP	4.8	□□□□□ -1.64
SPR28	YDR218C	YCK1	P23291	538 aa		4.8	□□□□□ -1.64
SPR28	YDR218C	YCR051W	P25631	222 aa		4.8	□□□□□ -1.64
SPR28	YDR218C	MRP20	P32387	263 aa		4.8	□□□□□ -1.64
SPR28	YDR218C	PPQ1	P32945	549 aa		4.8	□□□□□ -1.64
SPR28	YDR218C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
SPR28	YDR218C	KTR3	P38130	404 aa	Predicted RBP	4.8	□□□□□ -1.64
SPR28	YDR218C	APN2	P38207	520 aa		4.8	□□□□□ -1.64
SPR28	YDR218C	GDT1	P38301	280 aa	Predicted RBP	4.8	□□□□□ -1.64
SPR28	YDR218C	YHR054C	P38780	354 aa		4.8	□□□□□ -1.64
SPR28	YDR218C	OSW5	P40219	148 aa		4.8	□□□□□ -1.64
SPR28	YDR218C	SDP1	P40479	209 aa		4.8	□□□□□ -1.64
SPR28	YDR218C	BST1	P43571	1029 aa		4.8	□□□□□ -1.64
SPR28	YDR218C	COG1	P53079	417 aa		4.8	□□□□□ -1.64
SPR28	YDR218C	YNR068C	P53754	272 aa		4.8	□□□□□ -1.64
SPR28	YDR218C	MAK10	Q02197	733 aa		4.8	□□□□□ -1.64
SPR28	YDR218C	YKR011C	Q02209	353 aa		4.8	□□□□□ -1.64
SPR28	YDR218C	VTC3	Q02725	835 aa		4.8	□□□□□ -1.64
SPR28	YDR218C	TAP42	Q04372	366 aa		4.8	□□□□□ -1.64
SPR28	YDR218C	ENT4	Q07872	247 aa		4.8	□□□□□ -1.64
SPR28	YDR218C	HER1	Q12276	1246 aa		4.8	□□□□□ -1.64
SPR28	YDR218C	GPM3	Q12326	303 aa		4.8	□□□□□ -1.64
SPR28	YDR218C	GRX6	Q12438	231 aa		4.8	□□□□□ -1.64
SPR28	YDR218C	RPL6B	P05739	176 aa	Known RBP	4.79	□□□□□ -1.64
SPR28	YDR218C	CTT1	P06115	562 aa		4.79	□□□□□ -1.64
SPR28	YDR218C	STE12	P13574	688 aa		4.79	□□□□□ -1.64
SPR28	YDR218C	KAR3	P17119	729 aa		4.79	□□□□□ -1.64
SPR28	YDR218C	CWH43	P25618	953 aa		4.79	□□□□□ -1.64
SPR28	YDR218C	ARP2	P32381	391 aa	Known RBP	4.79	□□□□□ -1.64
SPR28	YDR218C	YEL043W	P32618	956 aa		4.79	□□□□□ -1.64
SPR28	YDR218C	MIC60	P36112	540 aa		4.79	□□□□□ -1.64
SPR28	YDR218C	SRO77	P38163	1010 aa		4.79	□□□□□ -1.64
SPR28	YDR218C	YHR097C	P38809	366 aa	Known RBP	4.79	□□□□□ -1.64
SPR28	YDR218C	WSS1	P38838	269 aa		4.79	□□□□□ -1.64
SPR28	YDR218C	SMF1	P38925	575 aa		4.79	□□□□□ -1.64
SPR28	YDR218C	REV7	P38927	245 aa		4.79	□□□□□ -1.64
SPR28	YDR218C	LYS9	P38999	446 aa		4.79	□□□□□ -1.64
SPR28	YDR218C	ARB1	P40024	610 aa	Known RBP	4.79	□□□□□ -1.64
SPR28	YDR218C	QRI1	P43123	477 aa	Known RBP	4.79	□□□□□ -1.64
SPR28	YDR218C	AIP1	P46680	615 aa	Known RBP	4.79	□□□□□ -1.64
SPR28	YDR218C	NOP9	P47077	666 aa	Known RBP	4.79	□□□□□ -1.64
SPR28	YDR218C	YGR066C	P53242	292 aa		4.79	□□□□□ -1.64
SPR28	YDR218C	ARP4	P80428	489 aa		4.79	□□□□□ -1.64
SPR28	YDR218C	RPL6A	Q02326	176 aa	Known RBP	4.79	□□□□□ -1.64
SPR28	YDR218C	RNT1	Q02555	471 aa		4.79	□□□□□ -1.64
SPR28	YDR218C	FDC1	Q03034	503 aa		4.79	□□□□□ -1.64
SPR28	YDR218C	EFR3	Q03653	782 aa	Known RBP	4.79	□□□□□ -1.64
SPR28	YDR218C	PPN1	Q04119	674 aa		4.79	□□□□□ -1.64
SPR28	YDR218C	VBA4	Q04602	768 aa	Known RBP	4.79	□□□□□ -1.64
SPR28	YDR218C	ECM22	Q05958	814 aa	Predicted RBP	4.79	□□□□□ -1.64
SPR28	YDR218C	CIR2	Q08822	631 aa		4.79	□□□□□ -1.64
SPR28	YDR218C	BMS1	Q08965	1183 aa	Known RBP	4.79	□□□□□ -1.64
SPR28	YDR218C	THI21	Q08975	551 aa		4.79	□□□□□ -1.64
SPR28	YDR218C	ERG27	Q12452	347 aa	Known RBP	4.79	□□□□□ -1.64
SPR28	YDR218C	PFK27	Q12471	397 aa	Predicted RBP	4.79	□□□□□ -1.64
SPR28	YDR218C	CTF3	Q12748	733 aa		4.79	□□□□□ -1.64
SPR28	YDR218C	YIL002W-A	Q3E7Z5	69 aa		4.79	□□□□□ -1.64
SPR28	YDR218C	PPR1	P07272	904 aa	Predicted RBP	4.78	□□□□□ -1.64
SPR28	YDR218C	ALG7	P07286	448 aa		4.78	□□□□□ -1.64
SPR28	YDR218C	APE1	P14904	514 aa		4.78	□□□□□ -1.64
SPR28	YDR218C	MER1	P16523	270 aa		4.78	□□□□□ -1.64
SPR28	YDR218C	CPR2	P23285	205 aa		4.78	□□□□□ -1.64
SPR28	YDR218C	POL4	P25615	582 aa		4.78	□□□□□ -1.64
SPR28	YDR218C	SUR1	P33300	382 aa		4.78	□□□□□ -1.64
SPR28	YDR218C	AKL1	P38080	1108 aa	Known RBP	4.78	□□□□□ -1.64
SPR28	YDR218C	COS111	P38308	924 aa		4.78	□□□□□ -1.64
SPR28	YDR218C	HSM3	P38348	480 aa		4.78	□□□□□ -1.64
SPR28	YDR218C	CTF8	P38877	133 aa		4.78	□□□□□ -1.64
SPR28	YDR218C	YIL089W	P40500	205 aa		4.78	□□□□□ -1.64
SPR28	YDR218C	EFM4	P40516	257 aa		4.78	□□□□□ -1.64
SPR28	YDR218C	GCD10	P41814	478 aa		4.78	□□□□□ -1.64
SPR28	YDR218C	GLO1	P50107	326 aa		4.78	□□□□□ -1.64
SPR28	YDR218C	SNF12	P53628	566 aa		4.78	□□□□□ -1.64
SPR28	YDR218C	BRE5	P53741	515 aa	Known RBP	4.78	□□□□□ -1.64
SPR28	YDR218C	VPS64	Q03944	604 aa		4.78	□□□□□ -1.64
SPR28	YDR218C	YSH1	Q06224	779 aa	Predicted RBP	4.78	□□□□□ -1.64
SPR28	YDR218C	THI22	Q06490	572 aa		4.78	□□□□□ -1.64
SPR28	YDR218C	MCP2	Q06567	569 aa		4.78	□□□□□ -1.64
SPR28	YDR218C	PEX19	Q07418	342 aa		4.78	□□□□□ -1.64
SPR28	YDR218C	DIN7	Q12086	430 aa		4.78	□□□□□ -1.64
SPR28	YDR218C	AFI1	Q99222	893 aa		4.78	□□□□□ -1.64
SPR28	YDR218C	PRP4	P20053	465 aa	Known RBP	4.77	□□□□□ -1.65
SPR28	YDR218C	CAP1	P28495	268 aa	Known RBP	4.77	□□□□□ -1.65
SPR28	YDR218C	FRD1	P32614	470 aa	Known RBP	4.77	□□□□□ -1.65
SPR28	YDR218C	VID24	P38263	362 aa		4.77	□□□□□ -1.65
SPR28	YDR218C	MIP6	P38760	659 aa	Known RBP	4.77	□□□□□ -1.65
SPR28	YDR218C	PSD1	P39006	500 aa		4.77	□□□□□ -1.65
SPR28	YDR218C	MET18	P40469	1032 aa		4.77	□□□□□ -1.65
SPR28	YDR218C	YIL108W	P40483	696 aa	Known RBP	4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms