RNA–Protein interactions for RNA: YDR034C-C

YDR034C-C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YDR034C-C, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR034C-CYDR034C-C SPO16P17122 198 aa4.48□□□□□ -1.69
YDR034C-CYDR034C-C MSM1P22438 575 aa4.48□□□□□ -1.69
YDR034C-CYDR034C-C RFA2P26754 273 aaKnown RBP4.48□□□□□ -1.69
YDR034C-CYDR034C-C OCT1P35999 772 aa4.48□□□□□ -1.69
YDR034C-CYDR034C-C ACA1P39970 489 aa4.48□□□□□ -1.69
YDR034C-CYDR034C-C MSY1P48527 492 aa4.48□□□□□ -1.69
YDR034C-CYDR034C-C YPT11P48559 417 aa4.48□□□□□ -1.69
YDR034C-CYDR034C-C RPL15BP54780 204 aaPredicted RBP4.48□□□□□ -1.69
YDR034C-CYDR034C-C PDR8Q06149 701 aa4.48□□□□□ -1.69
YDR034C-CYDR034C-C MCH4Q08268 501 aa4.48□□□□□ -1.69
YDR034C-CYDR034C-C ATX2Q12067 313 aa4.48□□□□□ -1.69
YDR034C-CYDR034C-C ATP2P00830 511 aaKnown RBP4.47□□□□□ -1.69
YDR034C-CYDR034C-C NUC1P08466 329 aa4.47□□□□□ -1.69
YDR034C-CYDR034C-C MRP2P10663 115 aaPredicted RBP4.47□□□□□ -1.69
YDR034C-CYDR034C-C YCR006CP25350 157 aa4.47□□□□□ -1.69
YDR034C-CYDR034C-C NPR3P38742 1146 aa4.47□□□□□ -1.69
YDR034C-CYDR034C-C BUD16P39988 312 aa4.47□□□□□ -1.69
YDR034C-CYDR034C-C MDV1P47025 714 aa4.47□□□□□ -1.69
YDR034C-CYDR034C-C IRC8P47046 822 aa4.47□□□□□ -1.69
YDR034C-CYDR034C-C YJR008WP47085 338 aa4.47□□□□□ -1.69
YDR034C-CYDR034C-C UBP8P50102 471 aa4.47□□□□□ -1.69
YDR034C-CYDR034C-C DCP2P53550 970 aaKnown RBP4.47□□□□□ -1.69
YDR034C-CYDR034C-C ADE16P54113 591 aaKnown RBP4.47□□□□□ -1.69
YDR034C-CYDR034C-C BLS1Q06071 122 aa4.47□□□□□ -1.69
YDR034C-CYDR034C-C YLR049CQ12110 428 aa4.47□□□□□ -1.69
YDR034C-CYDR034C-C AIM17P23180 465 aaKnown RBP4.46□□□□□ -1.69
YDR034C-CYDR034C-C RAD16P31244 790 aa4.46□□□□□ -1.69
YDR034C-CYDR034C-C TPA1P40032 644 aaKnown RBP4.46□□□□□ -1.69
YDR034C-CYDR034C-C VPS25P47142 202 aa4.46□□□□□ -1.69
YDR034C-CYDR034C-C MRPL13Q02204 264 aa4.46□□□□□ -1.69
YDR034C-CYDR034C-C SWA2Q06677 668 aa4.46□□□□□ -1.69
YDR034C-CYDR034C-C VAM6Q07468 1049 aa4.46□□□□□ -1.69
YDR034C-CYDR034C-C PUF2Q12221 1075 aaKnown RBP RIP-Chip data4.46□□□□□ -1.69not detected
YDR034C-CYDR034C-C TPK1P06244 397 aa4.46□□□□□ -1.7
YDR034C-CYDR034C-C PGI1P12709 554 aaKnown RBP4.46□□□□□ -1.7
YDR034C-CYDR034C-C NCP1P16603 691 aaKnown RBP4.46□□□□□ -1.7
YDR034C-CYDR034C-C PHM8P40025 321 aa4.46□□□□□ -1.7
YDR034C-CYDR034C-C CDC1P40986 491 aa4.46□□□□□ -1.7
YDR034C-CYDR034C-C BOP3P53958 396 aa4.46□□□□□ -1.7
YDR034C-CYDR034C-C CIR2Q08822 631 aa4.46□□□□□ -1.7
YDR034C-CYDR034C-C COX17Q12287 69 aa4.46□□□□□ -1.7
YDR034C-CYDR034C-C YCP4P25349 247 aaKnown RBP4.45□□□□□ -1.7
YDR034C-CYDR034C-C YCL049CP25577 312 aa4.45□□□□□ -1.7
YDR034C-CYDR034C-C PTH2P34222 208 aa4.45□□□□□ -1.7
YDR034C-CYDR034C-C RPT2P40327 437 aaKnown RBP4.45□□□□□ -1.7
YDR034C-CYDR034C-C ASE1P50275 885 aa4.45□□□□□ -1.7
YDR034C-CYDR034C-C YML003WP0CF16 290 aa4.44□□□□□ -1.7
YDR034C-CYDR034C-C APA1P16550 321 aaKnown RBP4.44□□□□□ -1.7
YDR034C-CYDR034C-C SCS3P53012 380 aa4.44□□□□□ -1.7
YDR034C-CYDR034C-C SWF1Q04629 336 aa4.44□□□□□ -1.7
YDR034C-CYDR034C-C SNA4Q07549 140 aa4.44□□□□□ -1.7
YDR034C-CYDR034C-C DSE3Q08729 430 aa4.44□□□□□ -1.7
YDR034C-CYDR034C-C UBX3Q12229 455 aa4.44□□□□□ -1.7
YDR034C-CYDR034C-C PCT1P13259 424 aa4.43□□□□□ -1.7
YDR034C-CYDR034C-C ATO2P32907 282 aa4.43□□□□□ -1.7
YDR034C-CYDR034C-C LHS1P36016 881 aa4.43□□□□□ -1.7
YDR034C-CYDR034C-C GND1P38720 489 aaKnown RBP4.43□□□□□ -1.7
YDR034C-CYDR034C-C MRX1P40050 688 aa4.43□□□□□ -1.7
YDR034C-CYDR034C-C SMK1P41808 388 aa4.43□□□□□ -1.7
YDR034C-CYDR034C-C LYS20P48570 428 aaKnown RBP4.43□□□□□ -1.7
YDR034C-CYDR034C-C COG1P53079 417 aa4.43□□□□□ -1.7
YDR034C-CYDR034C-C YGL036WP53185 909 aaPredicted RBP4.43□□□□□ -1.7
YDR034C-CYDR034C-C LSC1P53598 329 aaKnown RBP4.43□□□□□ -1.7
YDR034C-CYDR034C-C PIG1Q06216 648 aa4.43□□□□□ -1.7
YDR034C-CYDR034C-C PFK2P16862 959 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
YDR034C-CYDR034C-C PXL1P36166 706 aa4.42□□□□□ -1.7
YDR034C-CYDR034C-C EXO84P38261 753 aa4.42□□□□□ -1.7
YDR034C-CYDR034C-C TPM2P40414 161 aa4.42□□□□□ -1.7
YDR034C-CYDR034C-C ARC35P53731 342 aaKnown RBP4.42□□□□□ -1.7
YDR034C-CYDR034C-C FCP1Q03254 732 aa4.42□□□□□ -1.7
YDR034C-CYDR034C-C CRN1Q06440 651 aa4.42□□□□□ -1.7
YDR034C-CYDR034C-C CSR1Q06705 408 aaKnown RBP4.42□□□□□ -1.7
YDR034C-CYDR034C-C GSH2Q08220 491 aa4.42□□□□□ -1.7
YDR034C-CYDR034C-C ERG27Q12452 347 aaKnown RBP4.42□□□□□ -1.7
YDR034C-CYDR034C-C GPA1P08539 472 aa4.41□□□□□ -1.7
YDR034C-CYDR034C-C TY2A-LR1P0C2J4 438 aa4.41□□□□□ -1.7
YDR034C-CYDR034C-C TY2A-FP0CX61 438 aa4.41□□□□□ -1.7
YDR034C-CYDR034C-C TY2A-GR2P0CX62 438 aa4.41□□□□□ -1.7
YDR034C-CYDR034C-C MTF2P10849 440 aa4.41□□□□□ -1.7
YDR034C-CYDR034C-C TY2A-CP25383 438 aa4.41□□□□□ -1.7
YDR034C-CYDR034C-C DBF20P32328 564 aa4.41□□□□□ -1.7
YDR034C-CYDR034C-C SOF1P33750 489 aaKnown RBP4.41□□□□□ -1.7
YDR034C-CYDR034C-C ADE17P38009 592 aaKnown RBP4.41□□□□□ -1.7
YDR034C-CYDR034C-C UME6P39001 836 aa4.41□□□□□ -1.7
YDR034C-CYDR034C-C IST3P40565 148 aaPredicted RBP4.41□□□□□ -1.7
YDR034C-CYDR034C-C TY2A-DR2Q03483 438 aa4.41□□□□□ -1.7
YDR034C-CYDR034C-C NUP53Q03790 475 aa4.41□□□□□ -1.7
YDR034C-CYDR034C-C YLR455WQ06188 304 aa4.41□□□□□ -1.7
YDR034C-CYDR034C-C TMA16Q08687 178 aa4.41□□□□□ -1.7
YDR034C-CYDR034C-C BUD7Q08754 746 aa4.41□□□□□ -1.7
YDR034C-CYDR034C-C TY2A-BQ12260 438 aa4.41□□□□□ -1.7
YDR034C-CYDR034C-C TY2A-OR2Q12293 438 aa4.41□□□□□ -1.7
YDR034C-CYDR034C-C TY2A-DR1Q12392 438 aa4.41□□□□□ -1.7
YDR034C-CYDR034C-C TY2A-OR1Q12439 438 aa4.41□□□□□ -1.7
YDR034C-CYDR034C-C TY2A-DR3Q99303 438 aa4.41□□□□□ -1.7
YDR034C-CYDR034C-C UBC1P21734 215 aaKnown RBP4.4□□□□□ -1.71
YDR034C-CYDR034C-C YSP3P25036 478 aa4.4□□□□□ -1.71
YDR034C-CYDR034C-C CDC15P27636 974 aa4.4□□□□□ -1.71
YDR034C-CYDR034C-C MRS6P32864 603 aaKnown RBP4.4□□□□□ -1.71
YDR034C-CYDR034C-C XRS2P33301 854 aa4.4□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 47.7 ms