RNA–Protein interactions for RNA: YMR044W

IOC4, Transcript of Member of a complex (Isw1b) with Isw1p and Ioc2p, yeast

Gene IOC4, Length 1,428 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IOC4	YMR044W	EHT1	P38295	451 aa		4.56	□□□□□ -1.68
IOC4	YMR044W	TDP1	P38319	544 aa		4.56	□□□□□ -1.68
IOC4	YMR044W	FMP10	P40098	244 aa		4.56	□□□□□ -1.68
IOC4	YMR044W	ASE1	P50275	885 aa		4.56	□□□□□ -1.68
IOC4	YMR044W	CTF4	Q01454	927 aa		4.56	□□□□□ -1.68
IOC4	YMR044W	YML119W	Q03208	357 aa		4.56	□□□□□ -1.68
IOC4	YMR044W	YLR345W	Q06137	509 aa		4.56	□□□□□ -1.68
IOC4	YMR044W	YPL191C	Q08930	360 aa		4.56	□□□□□ -1.68
IOC4	YMR044W	RPS13	P05756	151 aa	Known RBP	4.55	□□□□□ -1.68
IOC4	YMR044W	TUP1	P16649	713 aa		4.55	□□□□□ -1.68
IOC4	YMR044W	PRE2	P30656	287 aa	Known RBP	4.55	□□□□□ -1.68
IOC4	YMR044W	DCG1	P32460	244 aa		4.55	□□□□□ -1.68
IOC4	YMR044W	GCS1	P35197	352 aa		4.55	□□□□□ -1.68
IOC4	YMR044W	REG2	P38232	338 aa		4.55	□□□□□ -1.68
IOC4	YMR044W	SEC28	P40509	296 aa	Known RBP	4.55	□□□□□ -1.68
IOC4	YMR044W	IDS2	P46958	469 aa		4.55	□□□□□ -1.68
IOC4	YMR044W	AAD10	P47182	288 aa		4.55	□□□□□ -1.68
IOC4	YMR044W	SGF73	P53165	657 aa		4.55	□□□□□ -1.68
IOC4	YMR044W	PEX25	Q02969	394 aa		4.55	□□□□□ -1.68
IOC4	YMR044W	PRP3	Q03338	469 aa	Predicted RBP	4.55	□□□□□ -1.68
IOC4	YMR044W	CTK1	Q03957	528 aa	Known RBP	4.55	□□□□□ -1.68
IOC4	YMR044W	GYL1	Q04322	720 aa		4.55	□□□□□ -1.68
IOC4	YMR044W	AIM32	Q04689	311 aa		4.55	□□□□□ -1.68
IOC4	YMR044W	SKG3	Q06315	1026 aa		4.55	□□□□□ -1.68
IOC4	YMR044W	THI22	Q06490	572 aa		4.55	□□□□□ -1.68
IOC4	YMR044W	RIM20	Q12033	661 aa		4.55	□□□□□ -1.68
IOC4	YMR044W	HSP42	Q12329	375 aa		4.55	□□□□□ -1.68
IOC4	YMR044W	PEX1	P24004	1043 aa		4.55	□□□□□ -1.68
IOC4	YMR044W	CLB3	P24870	427 aa		4.55	□□□□□ -1.68
IOC4	YMR044W	PRP45	P28004	379 aa	Predicted RBP	4.55	□□□□□ -1.68
IOC4	YMR044W	RPN2	P32565	945 aa	Known RBP	4.55	□□□□□ -1.68
IOC4	YMR044W	SRO77	P38163	1010 aa		4.55	□□□□□ -1.68
IOC4	YMR044W	RGI2	P40188	164 aa		4.55	□□□□□ -1.68
IOC4	YMR044W	PFK26	P40433	827 aa	Known RBP	4.55	□□□□□ -1.68
IOC4	YMR044W	YIL161W	P40449	235 aa	Known RBP	4.55	□□□□□ -1.68
IOC4	YMR044W	LCB2	P40970	561 aa		4.55	□□□□□ -1.68
IOC4	YMR044W	YJL055W	P47044	245 aa		4.55	□□□□□ -1.68
IOC4	YMR044W	GLO1	P50107	326 aa		4.55	□□□□□ -1.68
IOC4	YMR044W	SEC5	P89102	971 aa		4.55	□□□□□ -1.68
IOC4	YMR044W	OAZ1	Q02803	292 aa		4.55	□□□□□ -1.68
IOC4	YMR044W	PDH1	Q12428	516 aa	Known RBP	4.55	□□□□□ -1.68
IOC4	YMR044W	GRX6	Q12438	231 aa		4.55	□□□□□ -1.68
IOC4	YMR044W	CPA2	P03965	1118 aa	Known RBP	4.54	□□□□□ -1.68
IOC4	YMR044W	VMA2	P16140	517 aa	Known RBP	4.54	□□□□□ -1.68
IOC4	YMR044W	VPS33	P20795	691 aa		4.54	□□□□□ -1.68
IOC4	YMR044W	LST4	P34239	828 aa		4.54	□□□□□ -1.68
IOC4	YMR044W	TSA1	P34760	196 aa	Known RBP	4.54	□□□□□ -1.68
IOC4	YMR044W	UBP11	P36026	717 aa		4.54	□□□□□ -1.68
IOC4	YMR044W	STB6	P36085	766 aa		4.54	□□□□□ -1.68
IOC4	YMR044W	OMA1	P36163	345 aa		4.54	□□□□□ -1.68
IOC4	YMR044W	COS111	P38308	924 aa		4.54	□□□□□ -1.68
IOC4	YMR044W	FMO1	P38866	432 aa		4.54	□□□□□ -1.68
IOC4	YMR044W	SMF1	P38925	575 aa		4.54	□□□□□ -1.68
IOC4	YMR044W	YJL193W	P39542	402 aa		4.54	□□□□□ -1.68
IOC4	YMR044W	YIL077C	P40508	320 aa		4.54	□□□□□ -1.68
IOC4	YMR044W	BAP3	P41815	604 aa		4.54	□□□□□ -1.68
IOC4	YMR044W	ZIM17	P42844	174 aa		4.54	□□□□□ -1.68
IOC4	YMR044W	LSB3	P43603	459 aa	Known RBP	4.54	□□□□□ -1.68
IOC4	YMR044W	SAE2	P46946	345 aa		4.54	□□□□□ -1.68
IOC4	YMR044W	INP52	P50942	1183 aa		4.54	□□□□□ -1.68
IOC4	YMR044W	COS12	P53053	380 aa		4.54	□□□□□ -1.68
IOC4	YMR044W	FDC1	Q03034	503 aa		4.54	□□□□□ -1.68
IOC4	YMR044W	MUB1	Q03162	620 aa		4.54	□□□□□ -1.68
IOC4	YMR044W	ERB1	Q04660	807 aa	Known RBP	4.54	□□□□□ -1.68
IOC4	YMR044W	ECM22	Q05958	814 aa	Predicted RBP	4.54	□□□□□ -1.68
IOC4	YMR044W	TCO89	Q08921	799 aa		4.54	□□□□□ -1.68
IOC4	YMR044W	REC107	P21651	314 aa		4.53	□□□□□ -1.68
IOC4	YMR044W	POL4	P25615	582 aa		4.53	□□□□□ -1.68
IOC4	YMR044W	MGM1	P32266	881 aa		4.53	□□□□□ -1.68
IOC4	YMR044W	AUR1	P36107	401 aa	Predicted RBP	4.53	□□□□□ -1.68
IOC4	YMR044W	MAL33	P38157	468 aa		4.53	□□□□□ -1.68
IOC4	YMR044W	AIM3	P38266	947 aa	Known RBP	4.53	□□□□□ -1.68
IOC4	YMR044W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
IOC4	YMR044W	ARB1	P40024	610 aa	Known RBP	4.53	□□□□□ -1.68
IOC4	YMR044W	JHD1	P40034	492 aa		4.53	□□□□□ -1.68
IOC4	YMR044W	SLZ1	P40167	298 aa		4.53	□□□□□ -1.68
IOC4	YMR044W	MET18	P40469	1032 aa		4.53	□□□□□ -1.68
IOC4	YMR044W	ROK1	P45818	564 aa	Predicted RBP	4.53	□□□□□ -1.68
IOC4	YMR044W	PIL1	P53252	339 aa	Known RBP	4.53	□□□□□ -1.68
IOC4	YMR044W	MTG1	Q03151	367 aa	Predicted RBP	4.53	□□□□□ -1.68
IOC4	YMR044W	PRP42	Q03776	544 aa	Known RBP	4.53	□□□□□ -1.68
IOC4	YMR044W	YFT2	Q06676	274 aa		4.53	□□□□□ -1.68
IOC4	YMR044W	YOL159C-A	Q3E769	90 aa		4.53	□□□□□ -1.68
IOC4	YMR044W	PNO1	Q99216	274 aa	Known RBP	4.53	□□□□□ -1.68
IOC4	YMR044W	VCX1	Q99385	411 aa		4.53	□□□□□ -1.68
IOC4	YMR044W	LAT1	P12695	482 aa	Known RBP	4.52	□□□□□ -1.69
IOC4	YMR044W	STE12	P13574	688 aa		4.52	□□□□□ -1.69
IOC4	YMR044W	CLB1	P24868	471 aa		4.52	□□□□□ -1.69
IOC4	YMR044W	FEN2	P25621	512 aa	Known RBP	4.52	□□□□□ -1.69
IOC4	YMR044W	CAP1	P28495	268 aa	Known RBP	4.52	□□□□□ -1.69
IOC4	YMR044W	BCS1	P32839	456 aa		4.52	□□□□□ -1.69
IOC4	YMR044W	KES1	P35844	434 aa	Known RBP	4.52	□□□□□ -1.69
IOC4	YMR044W	UBP13	P38187	747 aa		4.52	□□□□□ -1.69
IOC4	YMR044W	NUP60	P39705	539 aa		4.52	□□□□□ -1.69
IOC4	YMR044W	YEL057C	P39983	233 aa		4.52	□□□□□ -1.69
IOC4	YMR044W	TMN3	P40071	706 aa		4.52	□□□□□ -1.69
IOC4	YMR044W	DOT5	P40553	215 aa		4.52	□□□□□ -1.69
IOC4	YMR044W	YIR042C	P40586	236 aa		4.52	□□□□□ -1.69
IOC4	YMR044W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	not detected
IOC4	YMR044W	ECL1	P48235	211 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 31.1 ms