RNA–Protein interactions for RNA: YLR424W

SPP382, Transcript of Essential protein that forms a dimer with Ntr2p, yeast

Gene SPP382, Length 2,127 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPP382	YLR424W	AAD4	Q07747	329 aa		3.22	□□□□□ -1.89
SPP382	YLR424W	YBR126W-A	Q8TGU7	68 aa		3.22	□□□□□ -1.89
SPP382	YLR424W	YMR084W	A2P2R3	262 aa		3.21	□□□□□ -1.9
SPP382	YLR424W	TRP4	P07285	380 aa	Predicted RBP	3.21	□□□□□ -1.9
SPP382	YLR424W	THR1	P17423	357 aa	Known RBP	3.21	□□□□□ -1.9
SPP382	YLR424W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	3.21	□□□□□ -1.9	not detected
SPP382	YLR424W	PET123	P17558	318 aa		3.21	□□□□□ -1.9
SPP382	YLR424W	CLB1	P24868	471 aa		3.21	□□□□□ -1.9
SPP382	YLR424W	YEL043W	P32618	956 aa		3.21	□□□□□ -1.9
SPP382	YLR424W	APE3	P37302	537 aa	Known RBP	3.21	□□□□□ -1.9
SPP382	YLR424W	YIL161W	P40449	235 aa	Known RBP	3.21	□□□□□ -1.9
SPP382	YLR424W	NAS2	P40555	220 aa		3.21	□□□□□ -1.9
SPP382	YLR424W	ROK1	P45818	564 aa	Predicted RBP	3.21	□□□□□ -1.9
SPP382	YLR424W	MNT2	P53059	558 aa		3.21	□□□□□ -1.9
SPP382	YLR424W	MNP1	P53163	194 aa	Predicted RBP	3.21	□□□□□ -1.9
SPP382	YLR424W	TOF1	P53840	1238 aa		3.21	□□□□□ -1.9
SPP382	YLR424W	HDA1	P53973	706 aa		3.21	□□□□□ -1.9
SPP382	YLR424W	RSF1	Q05043	376 aa		3.21	□□□□□ -1.9
SPP382	YLR424W	YLR407W	Q06070	228 aa		3.21	□□□□□ -1.9
SPP382	YLR424W	RTK1	Q12100	620 aa	Predicted RBP	3.21	□□□□□ -1.9
SPP382	YLR424W	YOR111W	Q99210	232 aa		3.21	□□□□□ -1.9
SPP382	YLR424W	YLR149C	Q99296	730 aa		3.21	□□□□□ -1.9
SPP382	YLR424W	RPS9A	O13516	197 aa	Known RBP	3.2	□□□□□ -1.9
SPP382	YLR424W	RPS17A	P02407	136 aa	Known RBP	3.2	□□□□□ -1.9
SPP382	YLR424W	TPK1	P06244	397 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	RPS17B	P14127	136 aa	Known RBP	3.2	□□□□□ -1.9
SPP382	YLR424W	CLB3	P24870	427 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	RAD51	P25454	400 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	YCL002C	P25565	263 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	YBL029W	P38201	376 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	SIF2	P38262	535 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	GND1	P38720	489 aa	Known RBP	3.2	□□□□□ -1.9
SPP382	YLR424W	CTF8	P38877	133 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	SMC2	P38989	1170 aa	Known RBP	3.2	□□□□□ -1.9
SPP382	YLR424W	BUD16	P39988	312 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	SSU1	P41930	458 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	BUL1	P48524	976 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	NUP84	P52891	726 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	RPN14	P53196	417 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	SNF12	P53628	566 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	YNR071C	P53757	342 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	RIA1	P53893	1110 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	YSA1	Q01976	231 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	RRN5	Q02983	363 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	AIM32	Q04689	311 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	PEX19	Q07418	342 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	RPB2	P08518	1224 aa	Known RBP	3.2	□□□□□ -1.9
SPP382	YLR424W	SUI3	P09064	285 aa	Known RBP	3.2	□□□□□ -1.9
SPP382	YLR424W	APE1	P14904	514 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	KAR3	P17119	729 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	PRE8	P23639	250 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	RIT1	P23796	513 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	CWH43	P25618	953 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	PPQ1	P32945	549 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	STB6	P36085	766 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	SAP190	P36123	1033 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	CCL1	P37366	393 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	AKL1	P38080	1108 aa	Known RBP	3.2	□□□□□ -1.9
SPP382	YLR424W	MTG2	P38860	518 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	SMF1	P38925	575 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	LYS9	P38999	446 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	ATF1	P40353	525 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	NOP9	P47077	666 aa	Known RBP	3.2	□□□□□ -1.9
SPP382	YLR424W	BRE5	P53741	515 aa	Known RBP	3.2	□□□□□ -1.9
SPP382	YLR424W	ARP5	P53946	755 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	PRO2	P54885	456 aa	Known RBP	3.2	□□□□□ -1.9
SPP382	YLR424W	ARP4	P80428	489 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	SLU7	Q02775	382 aa	Known RBP	3.2	□□□□□ -1.9
SPP382	YLR424W	YMR210W	Q03649	449 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	GTB1	Q04924	702 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	CRR1	Q05790	422 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	DBP9	Q06218	594 aa	Known RBP	3.2	□□□□□ -1.9
SPP382	YLR424W	YPR172W	Q06608	200 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	RTC5	Q12108	567 aa	Known RBP	3.2	□□□□□ -1.9
SPP382	YLR424W	RUD3	Q12234	484 aa	Known RBP	3.2	□□□□□ -1.9
SPP382	YLR424W	SWM1	Q12379	170 aa		3.2	□□□□□ -1.9
SPP382	YLR424W	ADE3	P07245	946 aa	Known RBP	3.19	□□□□□ -1.9
SPP382	YLR424W	PCK1	P10963	549 aa		3.19	□□□□□ -1.9
SPP382	YLR424W	CBS1	P14066	229 aa		3.19	□□□□□ -1.9
SPP382	YLR424W	CPR2	P23285	205 aa		3.19	□□□□□ -1.9
SPP382	YLR424W	MET18	P40469	1032 aa		3.19	□□□□□ -1.9
SPP382	YLR424W	IST3	P40565	148 aa	Predicted RBP	3.19	□□□□□ -1.9
SPP382	YLR424W	KEL2	P50090	882 aa		3.19	□□□□□ -1.9
SPP382	YLR424W	PUS2	P53167	370 aa		3.19	□□□□□ -1.9
SPP382	YLR424W	PEF1	P53238	335 aa		3.19	□□□□□ -1.9
SPP382	YLR424W	GYL1	Q04322	720 aa		3.19	□□□□□ -1.9
SPP382	YLR424W	YSH1	Q06224	779 aa	Predicted RBP	3.19	□□□□□ -1.9
SPP382	YLR424W	LUC7	Q07508	261 aa	Predicted RBP	3.19	□□□□□ -1.9
SPP382	YLR424W	SPE3	Q12074	293 aa	Known RBP	3.19	□□□□□ -1.9
SPP382	YLR424W	GET3	Q12154	354 aa	Known RBP	3.19	□□□□□ -1.9
SPP382	YLR424W	SEC39	Q12745	709 aa		3.19	□□□□□ -1.9
SPP382	YLR424W	Q0142	Q9ZZW4	58 aa		3.19	□□□□□ -1.9
SPP382	YLR424W	YLR302C	O13544	120 aa		3.19	□□□□□ -1.9
SPP382	YLR424W	YML002W	P0CF17	737 aa		3.19	□□□□□ -1.9
SPP382	YLR424W	DBP3	P20447	523 aa	Known RBP	3.19	□□□□□ -1.9
SPP382	YLR424W	YCK1	P23291	538 aa		3.19	□□□□□ -1.9
SPP382	YLR424W	ERG4	P25340	473 aa		3.19	□□□□□ -1.9
SPP382	YLR424W	PEP3	P27801	918 aa		3.19	□□□□□ -1.9
SPP382	YLR424W	CAP1	P28495	268 aa	Known RBP	3.19	□□□□□ -1.9
SPP382	YLR424W	MSP1	P28737	362 aa		3.19	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms