RNA–Protein interactions for RNA: YLR411W

CTR3, Transcript of High-affinity copper transporter of the plasma membrane, yeast

Gene CTR3, Length 726 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTR3	YLR411W	YGR054W	P53235	642 aa	Known RBP	5.71	□□□□□ -1.5
CTR3	YLR411W	SPC98	P53540	846 aa		5.71	□□□□□ -1.5
CTR3	YLR411W	UFO1	Q04511	668 aa		5.71	□□□□□ -1.5
CTR3	YLR411W	HCR1	Q05775	265 aa	Known RBP	5.71	□□□□□ -1.5
CTR3	YLR411W	ECM38	Q05902	660 aa	Predicted RBP	5.71	□□□□□ -1.5
CTR3	YLR411W	PEX15	Q08215	383 aa		5.71	□□□□□ -1.5
CTR3	YLR411W	AIM41	Q12032	185 aa		5.71	□□□□□ -1.5
CTR3	YLR411W	KAR1	P11927	433 aa		5.7	□□□□□ -1.5
CTR3	YLR411W	RMA1	P36001	430 aa	Known RBP	5.7	□□□□□ -1.5
CTR3	YLR411W	YKL133C	P36066	463 aa		5.7	□□□□□ -1.5
CTR3	YLR411W	ADE17	P38009	592 aa	Known RBP	5.7	□□□□□ -1.5
CTR3	YLR411W	YMC2	P38087	329 aa		5.7	□□□□□ -1.5
CTR3	YLR411W	CAJ1	P39101	391 aa		5.7	□□□□□ -1.5
CTR3	YLR411W	BUD16	P39988	312 aa		5.7	□□□□□ -1.5
CTR3	YLR411W	PEF1	P53238	335 aa		5.7	□□□□□ -1.5
CTR3	YLR411W	GFD1	Q04839	188 aa	Known RBP	5.7	□□□□□ -1.5
CTR3	YLR411W	CWC2	Q12046	339 aa	Predicted RBP	5.7	□□□□□ -1.5
CTR3	YLR411W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	5.69	□□□□□ -1.5	not detected
CTR3	YLR411W	BMH1	P29311	267 aa	Known RBP	5.69	□□□□□ -1.5
CTR3	YLR411W	NFU1	P32860	256 aa		5.69	□□□□□ -1.5
CTR3	YLR411W	EHT1	P38295	451 aa		5.69	□□□□□ -1.5
CTR3	YLR411W	EFM2	P38347	419 aa		5.69	□□□□□ -1.5
CTR3	YLR411W	MUP3	P38734	546 aa		5.69	□□□□□ -1.5
CTR3	YLR411W	PPE1	P38796	400 aa		5.69	□□□□□ -1.5
CTR3	YLR411W	MIT1	P40002	666 aa		5.69	□□□□□ -1.5
CTR3	YLR411W	PMT6	P42934	759 aa		5.69	□□□□□ -1.5
CTR3	YLR411W	MTD1	Q02046	320 aa	Known RBP	5.69	□□□□□ -1.5
CTR3	YLR411W	YOR378W	Q08902	515 aa		5.69	□□□□□ -1.5
CTR3	YLR411W	POM152	P39685	1337 aa		5.69	□□□□□ -1.5
CTR3	YLR411W	HSP82	P02829	709 aa	Known RBP	5.68	□□□□□ -1.5
CTR3	YLR411W	CLB1	P24868	471 aa		5.68	□□□□□ -1.5
CTR3	YLR411W	IMP2'	P32351	346 aa		5.68	□□□□□ -1.5
CTR3	YLR411W	MRPL7	P36519	292 aa		5.68	□□□□□ -1.5
CTR3	YLR411W	RTT107	P38850	1070 aa		5.68	□□□□□ -1.5
CTR3	YLR411W	NOC2	P39744	710 aa	Known RBP	5.68	□□□□□ -1.5
CTR3	YLR411W	YEL020C	P39994	560 aa		5.68	□□□□□ -1.5
CTR3	YLR411W	EAF5	P39995	279 aa		5.68	□□□□□ -1.5
CTR3	YLR411W	APT1	P49435	187 aa	Known RBP	5.68	□□□□□ -1.5
CTR3	YLR411W	SQS1	P53866	767 aa	Known RBP	5.68	□□□□□ -1.5
CTR3	YLR411W	UBP16	Q02863	499 aa		5.68	□□□□□ -1.5
CTR3	YLR411W	EFR3	Q03653	782 aa	Known RBP	5.68	□□□□□ -1.5
CTR3	YLR411W	CEF1	Q03654	590 aa	Predicted RBP	5.68	□□□□□ -1.5
CTR3	YLR411W	SML1	Q04964	104 aa		5.68	□□□□□ -1.5
CTR3	YLR411W	PHM6	Q05637	104 aa		5.68	□□□□□ -1.5
CTR3	YLR411W	VPS38	Q05919	439 aa		5.68	□□□□□ -1.5
CTR3	YLR411W	CEX1	Q12453	761 aa		5.68	□□□□□ -1.5
CTR3	YLR411W	VPS5	Q92331	675 aa		5.68	□□□□□ -1.5
CTR3	YLR411W	YOL087C	Q99247	1116 aa		5.68	□□□□□ -1.5
CTR3	YLR411W	RPN13	O13563	156 aa		5.67	□□□□□ -1.5
CTR3	YLR411W	CYB2	P00175	591 aa		5.67	□□□□□ -1.5
CTR3	YLR411W	PHO5	P00635	467 aa		5.67	□□□□□ -1.5
CTR3	YLR411W	PET123	P17558	318 aa		5.67	□□□□□ -1.5
CTR3	YLR411W	STE4	P18851	423 aa		5.67	□□□□□ -1.5
CTR3	YLR411W	RPO26	P20435	155 aa		5.67	□□□□□ -1.5
CTR3	YLR411W	UBC1	P21734	215 aa	Known RBP	5.67	□□□□□ -1.5
CTR3	YLR411W	MCM4	P30665	933 aa	Known RBP	5.67	□□□□□ -1.5
CTR3	YLR411W	MUD2	P36084	527 aa	Known RBP	5.67	□□□□□ -1.5
CTR3	YLR411W	VPS8	P39702	1274 aa		5.67	□□□□□ -1.5
CTR3	YLR411W	YEL025C	P39991	1188 aa		5.67	□□□□□ -1.5
CTR3	YLR411W	HOL1	P53389	586 aa		5.67	□□□□□ -1.5
CTR3	YLR411W	DAK1	P54838	584 aa	Known RBP	5.67	□□□□□ -1.5
CTR3	YLR411W	APM1	Q00776	475 aa	Predicted RBP	5.67	□□□□□ -1.5
CTR3	YLR411W	VTC3	Q02725	835 aa		5.67	□□□□□ -1.5
CTR3	YLR411W	NGL2	Q03264	515 aa	Known RBP	5.67	□□□□□ -1.5
CTR3	YLR411W	YDR179W-A	Q03983	463 aa		5.67	□□□□□ -1.5
CTR3	YLR411W	RBA50	Q04418	439 aa		5.67	□□□□□ -1.5
CTR3	YLR411W	ARR3	Q06598	404 aa		5.67	□□□□□ -1.5
CTR3	YLR411W	PGA3	Q12746	312 aa	Known RBP	5.67	□□□□□ -1.5
CTR3	YLR411W	YKL068W-A	Q3E826	78 aa		5.67	□□□□□ -1.5
CTR3	YLR411W	TUF1	P02992	437 aa	Known RBP	5.66	□□□□□ -1.5
CTR3	YLR411W	ADY2	P25613	283 aa		5.66	□□□□□ -1.5
CTR3	YLR411W	CNS1	P33313	385 aa		5.66	□□□□□ -1.5
CTR3	YLR411W	TOM20	P35180	183 aa		5.66	□□□□□ -1.5
CTR3	YLR411W	BYE1	P36106	594 aa		5.66	□□□□□ -1.5
CTR3	YLR411W	PSY4	P38193	441 aa		5.66	□□□□□ -1.5
CTR3	YLR411W	VPS41	P38959	992 aa		5.66	□□□□□ -1.5
CTR3	YLR411W	CCT4	P39078	528 aa	Known RBP	5.66	□□□□□ -1.5
CTR3	YLR411W	LRO1	P40345	661 aa		5.66	□□□□□ -1.5
CTR3	YLR411W	THI6	P41835	540 aa		5.66	□□□□□ -1.5
CTR3	YLR411W	IRC8	P47046	822 aa		5.66	□□□□□ -1.5
CTR3	YLR411W	RTC4	P53850	401 aa		5.66	□□□□□ -1.5
CTR3	YLR411W	NEW1	Q08972	1196 aa	Known RBP	5.66	□□□□□ -1.5
CTR3	YLR411W	SLX4	Q12098	748 aa		5.66	□□□□□ -1.5
CTR3	YLR411W	SPO11	P23179	398 aa		5.65	□□□□□ -1.5
CTR3	YLR411W	SWI4	P25302	1093 aa	Known RBP	5.65	□□□□□ -1.5
CTR3	YLR411W	CWH43	P25618	953 aa		5.65	□□□□□ -1.5
CTR3	YLR411W	PPZ2	P33329	710 aa		5.65	□□□□□ -1.5
CTR3	YLR411W	DHR2	P36009	735 aa	Predicted RBP	5.65	□□□□□ -1.5
CTR3	YLR411W	STL1	P39932	569 aa		5.65	□□□□□ -1.5
CTR3	YLR411W	FYV8	P46949	817 aa	Known RBP	5.65	□□□□□ -1.5
CTR3	YLR411W	MNT2	P53059	558 aa		5.65	□□□□□ -1.5
CTR3	YLR411W	YGL082W	P53155	381 aa		5.65	□□□□□ -1.5
CTR3	YLR411W	CAF130	P53280	1122 aa	Predicted RBP	5.65	□□□□□ -1.5
CTR3	YLR411W	FCP1	Q03254	732 aa		5.65	□□□□□ -1.5
CTR3	YLR411W	VMS1	Q04311	632 aa	Known RBP	5.65	□□□□□ -1.5
CTR3	YLR411W	GET3	Q12154	354 aa	Known RBP	5.65	□□□□□ -1.5
CTR3	YLR411W	RRI2	Q12348	645 aa		5.65	□□□□□ -1.5
CTR3	YLR411W	MDM20	Q12387	796 aa	Known RBP	5.65	□□□□□ -1.5
CTR3	YLR411W	HOP1	P20050	605 aa		5.64	□□□□□ -1.51
CTR3	YLR411W	CDC15	P27636	974 aa		5.64	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms