RNA–Protein interactions for RNA: YIL021W

RPB3, Transcript of RNA polymerase II third largest subunit B44, yeast

Gene RPB3, Length 957 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB3	YIL021W	SLX4	Q12098	748 aa		4.01	□□□□□ -1.77
RPB3	YIL021W	YLR125W	Q12138	136 aa		4.01	□□□□□ -1.77
RPB3	YIL021W	YLL058W	Q12198	575 aa		4.01	□□□□□ -1.77
RPB3	YIL021W	NCA2	Q12374	616 aa		4.01	□□□□□ -1.77
RPB3	YIL021W	TY1B-A	O13527	1196 aa	Known RBP	4	□□□□□ -1.77
RPB3	YIL021W	CAN1	P04817	590 aa		4	□□□□□ -1.77
RPB3	YIL021W	ERR1	P0CX10	437 aa		4	□□□□□ -1.77
RPB3	YIL021W	ERR2	P0CX11	437 aa		4	□□□□□ -1.77
RPB3	YIL021W	PEP5	P12868	1029 aa		4	□□□□□ -1.77
RPB3	YIL021W	SRV2	P17555	526 aa	Known RBP	4	□□□□□ -1.77
RPB3	YIL021W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4	□□□□□ -1.77	not detected
RPB3	YIL021W	CAP1	P28495	268 aa	Known RBP	4	□□□□□ -1.77
RPB3	YIL021W	THI4	P32318	326 aa		4	□□□□□ -1.77
RPB3	YIL021W	TOA1	P32773	286 aa		4	□□□□□ -1.77
RPB3	YIL021W	YBL055C	P34220	418 aa	Predicted RBP	4	□□□□□ -1.77
RPB3	YIL021W	VHC1	P38329	1120 aa		4	□□□□□ -1.77
RPB3	YIL021W	MNN1	P39106	762 aa		4	□□□□□ -1.77
RPB3	YIL021W	MBP1	P39678	833 aa		4	□□□□□ -1.77
RPB3	YIL021W	ZRG8	P40021	1076 aa		4	□□□□□ -1.77
RPB3	YIL021W	TAM41	P53230	385 aa		4	□□□□□ -1.77
RPB3	YIL021W	PTA1	Q01329	785 aa	Predicted RBP	4	□□□□□ -1.77
RPB3	YIL021W	ADA2	Q02336	434 aa		4	□□□□□ -1.77
RPB3	YIL021W	TAF9	Q05027	157 aa		4	□□□□□ -1.77
RPB3	YIL021W	FAR8	Q05040	523 aa		4	□□□□□ -1.77
RPB3	YIL021W	SPH1	Q06160	661 aa		4	□□□□□ -1.77
RPB3	YIL021W	UBX5	Q06682	500 aa		4	□□□□□ -1.77
RPB3	YIL021W	CDA1	Q06702	301 aa		4	□□□□□ -1.77
RPB3	YIL021W	HIS5	P07172	385 aa		3.99	□□□□□ -1.77
RPB3	YIL021W	PMS1	P14242	873 aa		3.99	□□□□□ -1.77
RPB3	YIL021W	ARG1	P22768	420 aa		3.99	□□□□□ -1.77
RPB3	YIL021W	DAL2	P25335	343 aa		3.99	□□□□□ -1.77
RPB3	YIL021W	CDC48	P25694	835 aa	Known RBP	3.99	□□□□□ -1.77
RPB3	YIL021W	PDB1	P32473	366 aa	Known RBP	3.99	□□□□□ -1.77
RPB3	YIL021W	NIP1	P32497	812 aa	Known RBP	3.99	□□□□□ -1.77
RPB3	YIL021W	COT1	P32798	439 aa		3.99	□□□□□ -1.77
RPB3	YIL021W	CCL1	P37366	393 aa		3.99	□□□□□ -1.77
RPB3	YIL021W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	3.99	□□□□□ -1.77	not detected
RPB3	YIL021W	POA1	P38218	177 aa		3.99	□□□□□ -1.77
RPB3	YIL021W	MSG5	P38590	489 aa		3.99	□□□□□ -1.77
RPB3	YIL021W	ERC1	P38767	581 aa		3.99	□□□□□ -1.77
RPB3	YIL021W	HOS4	P40480	1083 aa		3.99	□□□□□ -1.77
RPB3	YIL021W	IAH1	P41734	238 aa		3.99	□□□□□ -1.77
RPB3	YIL021W	ALR2	P43553	858 aa		3.99	□□□□□ -1.77
RPB3	YIL021W	YGL039W	P53183	348 aa	Known RBP	3.99	□□□□□ -1.77
RPB3	YIL021W	YGR117C	P53270	476 aa		3.99	□□□□□ -1.77
RPB3	YIL021W	UTP8	P53276	713 aa	Known RBP	3.99	□□□□□ -1.77
RPB3	YIL021W	SUN4	P53616	420 aa		3.99	□□□□□ -1.77
RPB3	YIL021W	RPA49	Q01080	415 aa	Predicted RBP	3.99	□□□□□ -1.77
RPB3	YIL021W	SHR3	Q02774	210 aa		3.99	□□□□□ -1.77
RPB3	YIL021W	YDR222W	Q04925	415 aa		3.99	□□□□□ -1.77
RPB3	YIL021W	YDR278C	Q05612	105 aa		3.99	□□□□□ -1.77
RPB3	YIL021W	CMS1	Q07897	291 aa	Known RBP	3.99	□□□□□ -1.77
RPB3	YIL021W	SMC5	Q08204	1093 aa		3.99	□□□□□ -1.77
RPB3	YIL021W	OSW2	Q12202	724 aa		3.99	□□□□□ -1.77
RPB3	YIL021W	PNS1	Q12412	539 aa		3.99	□□□□□ -1.77
RPB3	YIL021W	YGR161W-C	Q3E744	92 aa		3.99	□□□□□ -1.77
RPB3	YIL021W	RPS3	P05750	240 aa	Known RBP	3.98	□□□□□ -1.77
RPB3	YIL021W	YML002W	P0CF17	737 aa		3.98	□□□□□ -1.77
RPB3	YIL021W	SFL1	P20134	766 aa		3.98	□□□□□ -1.77
RPB3	YIL021W	MRPL25	P23369	157 aa		3.98	□□□□□ -1.77
RPB3	YIL021W	PER1	P25625	357 aa		3.98	□□□□□ -1.77
RPB3	YIL021W	GPI10	P30777	616 aa		3.98	□□□□□ -1.77
RPB3	YIL021W	RAD5	P32849	1169 aa	Predicted RBP	3.98	□□□□□ -1.77
RPB3	YIL021W	CSG2	P35206	410 aa		3.98	□□□□□ -1.77
RPB3	YIL021W	MCR1	P36060	302 aa	Known RBP	3.98	□□□□□ -1.77
RPB3	YIL021W	HEL1	P36113	551 aa		3.98	□□□□□ -1.77
RPB3	YIL021W	YKR018C	P36114	725 aa		3.98	□□□□□ -1.77
RPB3	YIL021W	MRX3	P38172	270 aa		3.98	□□□□□ -1.77
RPB3	YIL021W	YBR062C	P38239	180 aa		3.98	□□□□□ -1.77
RPB3	YIL021W	POP4	P38336	279 aa		3.98	□□□□□ -1.77
RPB3	YIL021W	PMC1	P38929	1173 aa	Predicted RBP	3.98	□□□□□ -1.77
RPB3	YIL021W	HMF1	P40037	129 aa	Known RBP	3.98	□□□□□ -1.77
RPB3	YIL021W	YMR134W	P40207	237 aa		3.98	□□□□□ -1.77
RPB3	YIL021W	ASG1	P40467	964 aa		3.98	□□□□□ -1.77
RPB3	YIL021W	TDA10	P42938	290 aa		3.98	□□□□□ -1.77
RPB3	YIL021W	ILM1	P47155	203 aa		3.98	□□□□□ -1.77
RPB3	YIL021W	MSE1	P48525	536 aa		3.98	□□□□□ -1.77
RPB3	YIL021W	HSH155	P49955	971 aa	Known RBP	3.98	□□□□□ -1.77
RPB3	YIL021W	ZIP2	P53061	704 aa		3.98	□□□□□ -1.77
RPB3	YIL021W	RTT102	P53330	157 aa		3.98	□□□□□ -1.77
RPB3	YIL021W	SUB1	P54000	292 aa	Known RBP	3.98	□□□□□ -1.77
RPB3	YIL021W	GTR1	Q00582	310 aa		3.98	□□□□□ -1.77
RPB3	YIL021W	CEF1	Q03654	590 aa	Predicted RBP	3.98	□□□□□ -1.77
RPB3	YIL021W	SPC24	Q04477	213 aa		3.98	□□□□□ -1.77
RPB3	YIL021W	UFO1	Q04511	668 aa		3.98	□□□□□ -1.77
RPB3	YIL021W	DUS3	Q06053	668 aa	Known RBP	3.98	□□□□□ -1.77
RPB3	YIL021W	IWR1	Q07532	353 aa	Predicted RBP	3.98	□□□□□ -1.77
RPB3	YIL021W	ISA1	Q07821	250 aa	Predicted RBP	3.98	□□□□□ -1.77
RPB3	YIL021W	NFI1	Q12216	726 aa		3.98	□□□□□ -1.77
RPB3	YIL021W	CSR2	Q12734	1121 aa		3.98	□□□□□ -1.77
RPB3	YIL021W	ADE3	P07245	946 aa	Known RBP	3.97	□□□□□ -1.77
RPB3	YIL021W	ILV2	P07342	687 aa	Known RBP	3.97	□□□□□ -1.77
RPB3	YIL021W	FBP1	P09201	348 aa		3.97	□□□□□ -1.77
RPB3	YIL021W	NAT1	P12945	854 aa	Known RBP	3.97	□□□□□ -1.77
RPB3	YIL021W	ENA1	P13587	1091 aa		3.97	□□□□□ -1.77
RPB3	YIL021W	HEM15	P16622	393 aa		3.97	□□□□□ -1.77
RPB3	YIL021W	CBF1	P17106	351 aa		3.97	□□□□□ -1.77
RPB3	YIL021W	PRP4	P20053	465 aa	Known RBP	3.97	□□□□□ -1.77
RPB3	YIL021W	SEC14	P24280	304 aa	Known RBP	3.97	□□□□□ -1.77
RPB3	YIL021W	PMI40	P29952	429 aa	Known RBP	3.97	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms