RNA–Protein interactions for RNA: YEL031W

SPF1, Transcript of P-type ATPase, ion transporter of the ER membrane, yeastyeast

Gene SPF1, Length 3,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPF1YEL031W DBF2P22204 572 aa2.42□□□□□ -2.02
SPF1YEL031W DMC1P25453 334 aa2.42□□□□□ -2.02
SPF1YEL031W URA7P28274 579 aaKnown RBP2.42□□□□□ -2.02
SPF1YEL031W CAP1P28495 268 aaKnown RBP2.42□□□□□ -2.02
SPF1YEL031W PRP21P32524 280 aaPredicted RBP2.42□□□□□ -2.02
SPF1YEL031W SIP2P34164 415 aaKnown RBP2.42□□□□□ -2.02
SPF1YEL031W ARA1P38115 344 aa2.42□□□□□ -2.02
SPF1YEL031W PBP2P38151 413 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
SPF1YEL031W CEM1P39525 442 aa2.42□□□□□ -2.02
SPF1YEL031W MEF2P39677 819 aa2.42□□□□□ -2.02
SPF1YEL031W SEN34P39707 275 aa2.42□□□□□ -2.02
SPF1YEL031W DSE1P40077 573 aa2.42□□□□□ -2.02
SPF1YEL031W HXT9P40885 567 aa2.42□□□□□ -2.02
SPF1YEL031W LSB1P53281 241 aa2.42□□□□□ -2.02
SPF1YEL031W NIS1P53939 407 aa2.42□□□□□ -2.02
SPF1YEL031W RRN11Q04712 507 aa2.42□□□□□ -2.02
SPF1YEL031W ARP9Q05123 467 aa2.42□□□□□ -2.02
SPF1YEL031W YLR257WQ06146 321 aaKnown RBP2.42□□□□□ -2.02
SPF1YEL031W SWA2Q06677 668 aa2.42□□□□□ -2.02
SPF1YEL031W IWR1Q07532 353 aaPredicted RBP2.42□□□□□ -2.02
SPF1YEL031W DIA2Q08496 732 aaPredicted RBP2.42□□□□□ -2.02
SPF1YEL031W TRE2Q08693 809 aa2.42□□□□□ -2.02
SPF1YEL031W RAX1Q08760 435 aa2.42□□□□□ -2.02
SPF1YEL031W HUA2Q12134 243 aa2.42□□□□□ -2.02
SPF1YEL031W DCP1Q12517 231 aaPredicted RBP2.42□□□□□ -2.02
SPF1YEL031W COR1P07256 457 aa2.41□□□□□ -2.02
SPF1YEL031W SNF4P12904 322 aa2.41□□□□□ -2.02
SPF1YEL031W VMA1P17255 1071 aaKnown RBP2.41□□□□□ -2.02
SPF1YEL031W MSM1P22438 575 aa2.41□□□□□ -2.02
SPF1YEL031W PTC6P25646 442 aa2.41□□□□□ -2.02
SPF1YEL031W MLS1P30952 554 aa2.41□□□□□ -2.02
SPF1YEL031W TPS2P31688 896 aaKnown RBP2.41□□□□□ -2.02
SPF1YEL031W MNN2P38069 597 aa2.41□□□□□ -2.02
SPF1YEL031W CST26P38226 397 aa2.41□□□□□ -2.02
SPF1YEL031W CYC2P38909 366 aa2.41□□□□□ -2.02
SPF1YEL031W DSS1P39112 969 aa2.41□□□□□ -2.02
SPF1YEL031W RCY1P39531 840 aa2.41□□□□□ -2.02
SPF1YEL031W CSM2P40465 213 aa2.41□□□□□ -2.02
SPF1YEL031W SEC28P40509 296 aaKnown RBP2.41□□□□□ -2.02
SPF1YEL031W ELP2P42935 788 aa2.41□□□□□ -2.02
SPF1YEL031W YPT32P51996 222 aaKnown RBP2.41□□□□□ -2.02
SPF1YEL031W MNP1P53163 194 aaPredicted RBP2.41□□□□□ -2.02
SPF1YEL031W YTP1P53584 459 aa2.41□□□□□ -2.02
SPF1YEL031W CUS2P53830 285 aaPredicted RBP2.41□□□□□ -2.02
SPF1YEL031W ASI2P53895 289 aa2.41□□□□□ -2.02
SPF1YEL031W YNL095CP53932 642 aa2.41□□□□□ -2.02
SPF1YEL031W RVB1Q03940 463 aaKnown RBP2.41□□□□□ -2.02
SPF1YEL031W AAD15Q08361 143 aa2.41□□□□□ -2.02
SPF1YEL031W ACM1Q08981 209 aa2.41□□□□□ -2.02
SPF1YEL031W TRM8Q12009 286 aa2.41□□□□□ -2.02
SPF1YEL031W ULA1Q12059 462 aa2.41□□□□□ -2.02
SPF1YEL031W LDB17Q12342 491 aa2.41□□□□□ -2.02
SPF1YEL031W YBL113CQ7M4S9 792 aa2.41□□□□□ -2.02
SPF1YEL031W GPM1P00950 247 aaKnown RBP2.41□□□□□ -2.02
SPF1YEL031W CAP2P13517 287 aa2.41□□□□□ -2.02
SPF1YEL031W RPL8AP17076 256 aaKnown RBP2.41□□□□□ -2.02
SPF1YEL031W SGV1P23293 657 aaKnown RBP2.41□□□□□ -2.02
SPF1YEL031W DBP2P24783 546 aaKnown RBP2.41□□□□□ -2.02
SPF1YEL031W PUF4P25339 888 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
SPF1YEL031W GBP2P25555 427 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
SPF1YEL031W PRP45P28004 379 aaPredicted RBP2.41□□□□□ -2.02
SPF1YEL031W ASF2P32448 525 aaPredicted RBP2.41□□□□□ -2.02
SPF1YEL031W NUP2P32499 720 aa2.41□□□□□ -2.02
SPF1YEL031W RSM22P36056 628 aa2.41□□□□□ -2.02
SPF1YEL031W UIP5P36137 443 aa2.41□□□□□ -2.02
SPF1YEL031W UTP30P36144 274 aaKnown RBP2.41□□□□□ -2.02
SPF1YEL031W KRE29P40026 464 aa2.41□□□□□ -2.02
SPF1YEL031W SCC4P40090 624 aa2.41□□□□□ -2.02
SPF1YEL031W YER156CP40093 338 aaKnown RBP2.41□□□□□ -2.02
SPF1YEL031W TGL3P40308 642 aa2.41□□□□□ -2.02
SPF1YEL031W ESL1P40456 1118 aa2.41□□□□□ -2.02
SPF1YEL031W HXT10P43581 546 aa2.41□□□□□ -2.02
SPF1YEL031W TAD1P53065 400 aa2.41□□□□□ -2.02
SPF1YEL031W DID2P69771 204 aa2.41□□□□□ -2.02
SPF1YEL031W SKI8Q02793 397 aaPredicted RBP2.41□□□□□ -2.02
SPF1YEL031W OYE2Q03558 400 aaKnown RBP2.41□□□□□ -2.02
SPF1YEL031W MRX10Q05648 414 aa2.41□□□□□ -2.02
SPF1YEL031W COS7Q07788 383 aa2.41□□□□□ -2.02
SPF1YEL031W YPL191CQ08930 360 aa2.41□□□□□ -2.02
SPF1YEL031W PGC1Q08959 321 aa2.41□□□□□ -2.02
SPF1YEL031W FAL1Q12099 399 aaKnown RBP2.41□□□□□ -2.02
SPF1YEL031W RTC5Q12108 567 aaKnown RBP2.41□□□□□ -2.02
SPF1YEL031W HOS1Q12214 470 aa2.41□□□□□ -2.02
SPF1YEL031W NTO1Q12311 748 aa2.41□□□□□ -2.02
SPF1YEL031W KCS1Q12494 1050 aa2.41□□□□□ -2.02
SPF1YEL031W RKM4Q12504 494 aa2.41□□□□□ -2.02
SPF1YEL031W COBP00163 385 aa2.41□□□□□ -2.02
SPF1YEL031W MRP2P10663 115 aaPredicted RBP2.41□□□□□ -2.02
SPF1YEL031W PFK1P16861 987 aaKnown RBP2.41□□□□□ -2.02
SPF1YEL031W CBF1P17106 351 aa2.41□□□□□ -2.02
SPF1YEL031W ARG8P18544 423 aa2.41□□□□□ -2.02
SPF1YEL031W PRP22P24384 1145 aaKnown RBP2.41□□□□□ -2.02
SPF1YEL031W RVS161P25343 265 aaKnown RBP2.41□□□□□ -2.02
SPF1YEL031W CHA1P25379 360 aaKnown RBP2.41□□□□□ -2.02
SPF1YEL031W MGT1P26188 188 aa2.41□□□□□ -2.02
SPF1YEL031W PEX3P28795 441 aa2.41□□□□□ -2.02
SPF1YEL031W ECM25P32525 599 aa2.41□□□□□ -2.02
SPF1YEL031W STB6P36085 766 aa2.41□□□□□ -2.02
SPF1YEL031W NCL1P38205 684 aaKnown RBP2.41□□□□□ -2.02
SPF1YEL031W EXO5P38289 585 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms